| GenBank top hits | e value | %identity | Alignment |
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| KAA0036533.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 2.4e-71 | 78.77 | Show/hide |
Query: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
MLSANFDMKDLGEADVIL IKIT+TENGIFLD SHYIEKILKKYNYF+SKSA TPYDSSVKLFKN DS+NQSEYASIIGS+RYA + TK DIAY V LL
Subjt: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
Query: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKRTIL
YRFTS PSL+HWNAI RV+RYL+KTQ+LGLHY KFP+ E Y DADWNSLSD+S+ TS YIFNI VA K KK TIL
Subjt: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKRTIL
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| KAA0058878.1 putative polyprotein [Cucumis melo var. makuwa] | 6.4e-72 | 77.22 | Show/hide |
Query: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
MLS NFDMKDLGEAD+ILGIKIT+T+NGI LD S+YIEKILKKYNYF+SK ACTPYDSSVKLFKN GD++NQSEY SIIGSLRY + T+PDIAY V LL
Subjt: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
Query: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKRTILA
RFTS P L+HWNAIER++RYLKKTQNLGLHY KF LE Y D DWNSLSDDS+ TS YIFNI VVA KSKK+TILA
Subjt: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKRTILA
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| KAA0060459.1 hypothetical protein E6C27_scaffold22G002870 [Cucumis melo var. makuwa] | 4.9e-72 | 80.59 | Show/hide |
Query: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
MLS NFDMKDLGEADVILGIKIT+TENGIFLD SHYIEK LKKYNYF+SK CTPYDSSVKLFKN GDS+NQ+EYASIIGSLRYAV++T+P IAY V LL
Subjt: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
Query: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVA
RFTS PSL+HWNAIERV+RYLKKTQNLGLHY KFP+ LE Y DADWNSL DDS+ TS YIFNI VA
Subjt: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVA
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| TYK00058.1 hypothetical protein E5676_scaffold596G00040 [Cucumis melo var. makuwa] | 2.4e-71 | 81.76 | Show/hide |
Query: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
MLSANFDMKDLGEADVILGIKI +TENGI LD SHYIEKILKKYNYFESK ACTPYDSSVKLFKN GDS+NQSEYASIIGSLRYA + T+PDIAY + LL
Subjt: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
Query: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVA
RFTS SL+HWNAIERV+RYLKKTQNLGLHY KF LE YIDADWNSLSDDS+ S YIF IT E VA
Subjt: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVA
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| TYK06419.1 hypothetical protein E5676_scaffold163G001210 [Cucumis melo var. makuwa] | 3.2e-71 | 78.86 | Show/hide |
Query: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
MLS NFDMK+L EADVILGIKIT+T+NGI LD SHYIEKILKKYNYF+SK CTPYDSSVKLF+N GDS+NQSEYASIIGSLRYA + T+PDIAY V LL
Subjt: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
Query: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKK
RFTS PSL+HWN IER+IRYLKKTQNLGLHY KFP LE YIDADWNSLSD+S+ TS YIFNI VA KSKK
Subjt: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T0X0 Retrotransposon protein, putative, Ty1-copia subclass | 1.2e-71 | 78.77 | Show/hide |
Query: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
MLSANFDMKDLGEADVIL IKIT+TENGIFLD SHYIEKILKKYNYF+SKSA TPYDSSVKLFKN DS+NQSEYASIIGS+RYA + TK DIAY V LL
Subjt: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
Query: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKRTIL
YRFTS PSL+HWNAI RV+RYL+KTQ+LGLHY KFP+ E Y DADWNSLSD+S+ TS YIFNI VA K KK TIL
Subjt: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKRTIL
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| A0A5D3BLQ7 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.2e-71 | 81.76 | Show/hide |
Query: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
MLSANFDMKDLGEADVILGIKI +TENGI LD SHYIEKILKKYNYFESK ACTPYDSSVKLFKN GDS+NQSEYASIIGSLRYA + T+PDIAY + LL
Subjt: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
Query: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVA
RFTS SL+HWNAIERV+RYLKKTQNLGLHY KF LE YIDADWNSLSDDS+ S YIF IT E VA
Subjt: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVA
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| A0A5D3C7T6 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.5e-71 | 78.86 | Show/hide |
Query: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
MLS NFDMK+L EADVILGIKIT+T+NGI LD SHYIEKILKKYNYF+SK CTPYDSSVKLF+N GDS+NQSEYASIIGSLRYA + T+PDIAY V LL
Subjt: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
Query: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKK
RFTS PSL+HWN IER+IRYLKKTQNLGLHY KFP LE YIDADWNSLSD+S+ TS YIFNI VA KSKK
Subjt: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKK
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| A0A5D3D4T4 Reverse transcriptase Ty1/copia-type domain-containing protein | 2.4e-72 | 80.59 | Show/hide |
Query: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
MLS NFDMKDLGEADVILGIKIT+TENGIFLD SHYIEK LKKYNYF+SK CTPYDSSVKLFKN GDS+NQ+EYASIIGSLRYAV++T+P IAY V LL
Subjt: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
Query: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVA
RFTS PSL+HWNAIERV+RYLKKTQNLGLHY KFP+ LE Y DADWNSL DDS+ TS YIFNI VA
Subjt: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVA
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| A0A5D3DJH9 Putative polyprotein | 3.1e-72 | 77.22 | Show/hide |
Query: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
MLS NFDMKDLGEAD+ILGIKIT+T+NGI LD S+YIEKILKKYNYF+SK ACTPYDSSVKLFKN GD++NQSEY SIIGSLRY + T+PDIAY V LL
Subjt: MLSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELL
Query: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKRTILA
RFTS P L+HWNAIER++RYLKKTQNLGLHY KF LE Y D DWNSLSDDS+ TS YIFNI VVA KSKK+TILA
Subjt: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKRTILA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 8.5e-19 | 32.53 | Show/hide |
Query: LSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELLY
L F M DL E +GI+I E+ I+L S Y++KIL K+N + TP S + D + S+IG L Y + T+PD+ V +L
Subjt: LSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELLY
Query: RFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQK---FPIALESYIDADWNSLSDDSRDTSDYIFNI
R++S + + W ++RV+RYLK T ++ L ++K F + Y+D+DW D + T+ Y+F +
Subjt: RFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQK---FPIALESYIDADWNSLSDDSRDTSDYIFNI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.4e-23 | 33.51 | Show/hide |
Query: LSANFDMKDLGEADVILGIKIT--KTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSE-------YASIIGSLRYAVNFTKPD
LS +FDMKDLG A ILG+KI +T ++L YIE++L+++N +K TP +KL K + + + + Y+S +GSL YA+ T+PD
Subjt: LSANFDMKDLGEADVILGIKIT--KTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSE-------YASIIGSLRYAVNFTKPD
Query: IAYVVELLYRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKRTILA
IA+ V ++ RF P +HW A++ ++RYL+ T L + L+ Y DAD D+ + ++ Y+F + ++ +SK + +A
Subjt: IAYVVELLYRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQKFPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKRTILA
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 1.6e-17 | 28.98 | Show/hide |
Query: LSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELLY
LS+ F MKDLG LGI+I +G+FL + Y E+IL + K TP + + + S++ SI+G+L+Y + T+PDI+Y V ++
Subjt: LSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSINQSEYASIIGSLRYAVNFTKPDIAYVVELLY
Query: RFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQK-FPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKR
+ P+L ++ ++RV+RY+K T GL+ K + ++++ D+DW + R T+ + + +++ +K++
Subjt: RFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQK-FPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKR
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-21 | 35.59 | Show/hide |
Query: LSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSI-NQSEYASIIGSLRYAVNFTKPDIAYVVELL
LS F +KD E LGI+ + G+ L YI +L + N +K TP S KL G + + +EY I+GSL+Y + FT+PDI+Y V L
Subjt: LSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSI-NQSEYASIIGSLRYAVNFTKPDIAYVVELL
Query: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQK-FPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKR
+F +P+ +H A++R++RYL T N G+ +K ++L +Y DADW DD T+ YI + ++ SKK+
Subjt: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQK-FPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.2e-22 | 33.9 | Show/hide |
Query: LSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSI-NQSEYASIIGSLRYAVNFTKPDIAYVVELL
LS F +K+ + LGI+ + G+ L Y +L + N +K TP +S KL + G + + +EY I+GSL+Y + FT+PD++Y V L
Subjt: LSANFDMKDLGEADVILGIKITKTENGIFLDPSHYIEKILKKYNYFESKSACTPYDSSVKLFKNIGDSI-NQSEYASIIGSLRYAVNFTKPDIAYVVELL
Query: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQK-FPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKR
++ +P+ HWNA++RV+RYL T + G+ +K ++L +Y DADW +DD T+ YI + ++ SKK+
Subjt: YRFTSIPSLKHWNAIERVIRYLKKTQNLGLHYQK-FPIALESYIDADWNSLSDDSRDTSDYIFNITREVVARKSKKR
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