; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0197331 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0197331
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr07:20616034..20616867
RNA-Seq ExpressionCmc07g0197331
SyntenyCmc07g0197331
Gene Ontology termsGO:0000055 - ribosomal large subunit export from nucleus (biological process)
GO:0015074 - DNA integration (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036990.1 protein SDA1-like protein isoform X2 [Cucumis melo var. makuwa]6.2e-13581.51Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGFL---------------KGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        +LQYKGR+VIAK S+LIPTILHTY+DSVFGGHSGFL               KGDVQKYC EC VCQRN+S     A LLTPLEIP+RIWDDIS DFIEGL
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGFL---------------KGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        PKAAGFEVI VVVD FSKYGHF+ LKHPFDAKTVAE+FVKEVVRLHGFP+ IVSDRDKIFLSHFWKELFRLAGT+LNRSTAYHPQTDGQTEV N SVEAY
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRCFCGERPKEW  WIHW +YWYNTTYQR+LGVSPFQAVYGRTPPPLVFY DLST+NSTL +QL+QRDIALG LKEHLRVA++KMKTYADLK
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

KAA0060163.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]3.1e-13480.14Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        MLQYKGRLVIA KSSLIP ILHTYH+SVFGGH GF               +KGDVQK+C+EC VCQRNKSLSL PA LLTPLEIP RIWDDISMDFIEGL
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        PKAAGFEVIFVV+D  SKY HF+ LK+PFDAK VAE+FVKEVVRLHGFP+SIVSDRDKIFLS+FWKELFRLAGT+LNRST +HPQTDGQTEV NRS+EAY
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRCFCGERP+EW  WIHWA+YWYNTTYQR+LGVSPFQAVYGR PPPL+ Y D  TSNSTL EQL+QRD+ALG LKEHLRVAQEKMK+YADLK
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

KAA0066077.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]1.9e-13682.19Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGFL---------------KGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        MLQYKGR+VIAK S+LIPTILHTYHDSVF GHSGFL               KGDVQKYCEEC VCQRNKSLSL PA LLTPLEIP+RIWD ISMDFIEGL
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGFL---------------KGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        PKAAGF+VI VVVD FSKY HF+ALKHPFDA+ VAE+FVKEVVRLHGFPKSIVSDRDK+FLSHFWKELFRLAGT+LNRST YHPQTDGQTEV +RSVEAY
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRCFCGERPKEW  WIHWA+YWYN TYQ++LGVSPFQAVYGRTP PLV Y D ST+NSTL EQL+QRDIALG LKEHLRVAQ+KMKTYADLK
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

KAA0066118.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-12370.89Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGFL---------------KGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        +L++KGRLV++K S+LIPTI+HTYHDSVFGGHSGFL               K DVQKYC+EC++CQ+NKS +L PA LL PLEIP+ IW DISMDFIEGL
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGFL---------------KGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        PK+ G+EVI VVVD  SKY HF+ LKHP+ AKTVAE+FVKEVVRLHGFPKSIVSDRDKIFLSHFW E+FRLAGT+LNRS++YHPQTDGQTEV N+SVEAY
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRCFCGE+P+EW+ W+HWA+YWYNTTY  ++G+SPFQAVYGR PPPL+ Y ++ T NSTL +QL+ R++ LG LKEHLRVAQE+MK +ADLK
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

TYK04251.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.2e-13379.79Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        MLQYKGRLVIA KSSLIP ILHTYH+SVFGGH GF               +KGDVQK+C+EC VCQRNKSLSL PA LLTPLEIP RIWDDISMDFIEGL
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        PKAAGFEVIFVV+D  SKY HF+ LK+PFDAK VAE+FVKEVVRLHGFP+SIVSDRDKIFLS+FWKELFRLAGT+LNRST +HPQTDGQTEV NRS+EAY
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRCFCGERP+EW  WIHWA+YWYNTTYQR+LGVSPFQAVYGR PPPL+ Y D  TSNSTL EQL+QRD+ALG LK+HLRVAQEKMK+YADLK
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

TrEMBL top hitse value%identityAlignment
A0A5A7T0V2 Protein SDA1-like protein isoform X23.0e-13581.51Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGFL---------------KGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        +LQYKGR+VIAK S+LIPTILHTY+DSVFGGHSGFL               KGDVQKYC EC VCQRN+S     A LLTPLEIP+RIWDDIS DFIEGL
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGFL---------------KGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        PKAAGFEVI VVVD FSKYGHF+ LKHPFDAKTVAE+FVKEVVRLHGFP+ IVSDRDKIFLSHFWKELFRLAGT+LNRSTAYHPQTDGQTEV N SVEAY
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRCFCGERPKEW  WIHW +YWYNTTYQR+LGVSPFQAVYGRTPPPLVFY DLST+NSTL +QL+QRDIALG LKEHLRVA++KMKTYADLK
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

A0A5A7UW14 Transposon Ty3-G Gag-Pol polyprotein1.5e-13480.14Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        MLQYKGRLVIA KSSLIP ILHTYH+SVFGGH GF               +KGDVQK+C+EC VCQRNKSLSL PA LLTPLEIP RIWDDISMDFIEGL
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        PKAAGFEVIFVV+D  SKY HF+ LK+PFDAK VAE+FVKEVVRLHGFP+SIVSDRDKIFLS+FWKELFRLAGT+LNRST +HPQTDGQTEV NRS+EAY
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRCFCGERP+EW  WIHWA+YWYNTTYQR+LGVSPFQAVYGR PPPL+ Y D  TSNSTL EQL+QRD+ALG LKEHLRVAQEKMK+YADLK
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

A0A5A7VG68 Transposon Tf2-9 polyprotein9.4e-13782.19Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGFL---------------KGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        MLQYKGR+VIAK S+LIPTILHTYHDSVF GHSGFL               KGDVQKYCEEC VCQRNKSLSL PA LLTPLEIP+RIWD ISMDFIEGL
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGFL---------------KGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        PKAAGF+VI VVVD FSKY HF+ALKHPFDA+ VAE+FVKEVVRLHGFPKSIVSDRDK+FLSHFWKELFRLAGT+LNRST YHPQTDGQTEV +RSVEAY
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRCFCGERPKEW  WIHWA+YWYN TYQ++LGVSPFQAVYGRTP PLV Y D ST+NSTL EQL+QRDIALG LKEHLRVAQ+KMKTYADLK
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

A0A5D3BX34 Transposon Ty3-I Gag-Pol polyprotein5.7e-13479.79Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        MLQYKGRLVIA KSSLIP ILHTYH+SVFGGH GF               +KGDVQK+C+EC VCQRNKSLSL PA LLTPLEIP RIWDDISMDFIEGL
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        PKAAGFEVIFVV+D  SKY HF+ LK+PFDAK VAE+FVKEVVRLHGFP+SIVSDRDKIFLS+FWKELFRLAGT+LNRST +HPQTDGQTEV NRS+EAY
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRCFCGERP+EW  WIHWA+YWYNTTYQR+LGVSPFQAVYGR PPPL+ Y D  TSNSTL EQL+QRD+ALG LK+HLRVAQEKMK+YADLK
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

A0A5D3CTA1 Ty3/gypsy retrotransposon protein5.3e-12470.89Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGFL---------------KGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        +L++KGRLV++K S+LIPTI+HTYHDSVFGGHSGFL               K DVQKYC+EC++CQ+NKS +L PA LL PLEIP+ IW DISMDFIEGL
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGFL---------------KGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        PK+ G+EVI VVVD  SKY HF+ LKHP+ AKTVAE+FVKEVVRLHGFPKSIVSDRDKIFLSHFW E+FRLAGT+LNRS++YHPQTDGQTEV N+SVEAY
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRCFCGE+P+EW+ W+HWA+YWYNTTY  ++G+SPFQAVYGR PPPL+ Y ++ T NSTL +QL+ R++ LG LKEHLRVAQE+MK +ADLK
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.9e-3932.31Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        ++  K ++++   + L  TI+  YH+     H G                ++  +Q+Y + C  CQ NKS +  P   L P+    R W+ +SMDFI  L
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        P+++G+  +FVVVD FSK    +       A+  A +F + V+   G PK I++D D IF S  WK+        +  S  Y PQTDGQTE  N++VE  
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTP--PPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRC C   P  W   I   +  YN     A  ++PF+ V+  +P   PL    +L + +    E  Q+      T+KEHL     KMK Y D+K
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTP--PPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

P0CT35 Transposon Tf2-2 polyprotein3.9e-3932.31Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        ++  K ++++   + L  TI+  YH+     H G                ++  +Q+Y + C  CQ NKS +  P   L P+    R W+ +SMDFI  L
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        P+++G+  +FVVVD FSK    +       A+  A +F + V+   G PK I++D D IF S  WK+        +  S  Y PQTDGQTE  N++VE  
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTP--PPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRC C   P  W   I   +  YN     A  ++PF+ V+  +P   PL    +L + +    E  Q+      T+KEHL     KMK Y D+K
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTP--PPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

P0CT36 Transposon Tf2-3 polyprotein3.9e-3932.31Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        ++  K ++++   + L  TI+  YH+     H G                ++  +Q+Y + C  CQ NKS +  P   L P+    R W+ +SMDFI  L
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        P+++G+  +FVVVD FSK    +       A+  A +F + V+   G PK I++D D IF S  WK+        +  S  Y PQTDGQTE  N++VE  
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTP--PPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRC C   P  W   I   +  YN     A  ++PF+ V+  +P   PL    +L + +    E  Q+      T+KEHL     KMK Y D+K
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTP--PPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

P0CT41 Transposon Tf2-12 polyprotein3.9e-3932.31Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        ++  K ++++   + L  TI+  YH+     H G                ++  +Q+Y + C  CQ NKS +  P   L P+    R W+ +SMDFI  L
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        P+++G+  +FVVVD FSK    +       A+  A +F + V+   G PK I++D D IF S  WK+        +  S  Y PQTDGQTE  N++VE  
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTP--PPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRC C   P  W   I   +  YN     A  ++PF+ V+  +P   PL    +L + +    E  Q+      T+KEHL     KMK Y D+K
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTP--PPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

Q9UR07 Transposon Tf2-11 polyprotein3.9e-3932.31Show/hide
Query:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL
        ++  K ++++   + L  TI+  YH+     H G                ++  +Q+Y + C  CQ NKS +  P   L P+    R W+ +SMDFI  L
Subjt:  MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGF---------------LKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGL

Query:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY
        P+++G+  +FVVVD FSK    +       A+  A +F + V+   G PK I++D D IF S  WK+        +  S  Y PQTDGQTE  N++VE  
Subjt:  PKAAGFEVIFVVVDLFSKYGHFMALKHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAY

Query:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTP--PPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK
        LRC C   P  W   I   +  YN     A  ++PF+ V+  +P   PL    +L + +    E  Q+      T+KEHL     KMK Y D+K
Subjt:  LRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSPFQAVYGRTP--PPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGTATAAAGGGAGGCTAGTGATTGCTAAAAAGTCATCATTGATTCCCACGATCCTTCATACGTATCATGATTCGGTGTTTGGGGGACACTCAGGGTTCTTGAA
GGGAGATGTACAGAAATATTGTGAAGAATGTGTTGTTTGTCAGCGAAATAAATCTTTATCTCTATTACCGGCCAGCTTGTTAACACCATTGGAGATTCCCAATAGAATTT
GGGATGATATATCAATGGATTTTATAGAAGGATTACCCAAGGCAGCCGGGTTTGAAGTGATATTCGTGGTGGTGGATCTTTTCAGTAAGTATGGCCATTTTATGGCTTTG
AAACACCCTTTTGATGCCAAAACTGTAGCAGAAATATTTGTGAAAGAAGTGGTTCGCCTACATGGGTTTCCTAAATCGATTGTATCAGATCGTGACAAAATCTTCTTGAG
CCATTTTTGGAAAGAATTGTTCAGATTGGCTGGTACGCAGCTGAATAGGAGCACAGCTTATCATCCGCAGACGGATGGGCAAACTGAAGTGTTTAATCGATCTGTAGAGG
CTTATTTGCGTTGTTTTTGTGGAGAGAGACCAAAGGAATGGAATCACTGGATACATTGGGCAAAGTATTGGTATAACACGACATATCAGCGAGCTCTTGGAGTCTCTCCA
TTTCAGGCTGTTTATGGTCGAACACCTCCACCTTTGGTATTCTATAGAGACCTCAGCACATCTAACTCTACACTTGGTGAGCAGCTACAACAAAGGGATATTGCCTTGGG
AACATTGAAAGAACATTTAAGAGTAGCTCAAGAAAAGATGAAAACATATGCTGATTTAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAGTATAAAGGGAGGCTAGTGATTGCTAAAAAGTCATCATTGATTCCCACGATCCTTCATACGTATCATGATTCGGTGTTTGGGGGACACTCAGGGTTCTTGAA
GGGAGATGTACAGAAATATTGTGAAGAATGTGTTGTTTGTCAGCGAAATAAATCTTTATCTCTATTACCGGCCAGCTTGTTAACACCATTGGAGATTCCCAATAGAATTT
GGGATGATATATCAATGGATTTTATAGAAGGATTACCCAAGGCAGCCGGGTTTGAAGTGATATTCGTGGTGGTGGATCTTTTCAGTAAGTATGGCCATTTTATGGCTTTG
AAACACCCTTTTGATGCCAAAACTGTAGCAGAAATATTTGTGAAAGAAGTGGTTCGCCTACATGGGTTTCCTAAATCGATTGTATCAGATCGTGACAAAATCTTCTTGAG
CCATTTTTGGAAAGAATTGTTCAGATTGGCTGGTACGCAGCTGAATAGGAGCACAGCTTATCATCCGCAGACGGATGGGCAAACTGAAGTGTTTAATCGATCTGTAGAGG
CTTATTTGCGTTGTTTTTGTGGAGAGAGACCAAAGGAATGGAATCACTGGATACATTGGGCAAAGTATTGGTATAACACGACATATCAGCGAGCTCTTGGAGTCTCTCCA
TTTCAGGCTGTTTATGGTCGAACACCTCCACCTTTGGTATTCTATAGAGACCTCAGCACATCTAACTCTACACTTGGTGAGCAGCTACAACAAAGGGATATTGCCTTGGG
AACATTGAAAGAACATTTAAGAGTAGCTCAAGAAAAGATGAAAACATATGCTGATTTAAAGTAA
Protein sequenceShow/hide protein sequence
MLQYKGRLVIAKKSSLIPTILHTYHDSVFGGHSGFLKGDVQKYCEECVVCQRNKSLSLLPASLLTPLEIPNRIWDDISMDFIEGLPKAAGFEVIFVVVDLFSKYGHFMAL
KHPFDAKTVAEIFVKEVVRLHGFPKSIVSDRDKIFLSHFWKELFRLAGTQLNRSTAYHPQTDGQTEVFNRSVEAYLRCFCGERPKEWNHWIHWAKYWYNTTYQRALGVSP
FQAVYGRTPPPLVFYRDLSTSNSTLGEQLQQRDIALGTLKEHLRVAQEKMKTYADLK