CuGenDBv2

Gene ID	Cmc07g0197341
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr07:20629901..20632418
RNA-Seq Expression	Cmc07g0197341
Synteny	Cmc07g0197341
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043227 - membrane-bounded organelle (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.27

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTN PAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQ NDPYLVEKR LAEAGQAVEFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGM PFEALYGK CRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEF +GDKVFLKVAPMRGV+RFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0037901.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.27

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV+SFGLTN PAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHE+HLRMVLQTLRDN+LYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRP+TVSEVRSFLGLAGYYRR VENFSR
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA KIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSA LITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCV SDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT RLNQVLEDMLRACALEFPGSWDSHLHLMEFA NNS+QATIGMAPFEALYGK CRS VCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPFEILE+IGP+AYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.26

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN PAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM
        FTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNS+QATIGMAPFEALYGK CRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.76

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN PAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYGK CRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFE+ DKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.01

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN PAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
         ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALY K CRSP+CWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

97.27

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTN PAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQ NDPYLVEKR LAEAGQAVEFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGM PFEALYGK CRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEF +GDKVFLKVAPMRGV+RFERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7T8G8 Reverse transcriptase

0.0e+00

97.27

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV+SFGLTN PAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHE+HLRMVLQTLRDN+LYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRP+TVSEVRSFLGLAGYYRR VENFSR
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA KIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSA LITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCV SDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT RLNQVLEDMLRACALEFPGSWDSHLHLMEFA NNS+QATIGMAPFEALYGK CRS VCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPFEILE+IGP+AYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7U330 Reverse transcriptase

0.0e+00

98.26

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN PAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM
        FTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNS+QATIGMAPFEALYGK CRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7UAA8 Reverse transcriptase

0.0e+00

97.76

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN PAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYGK CRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFE+ DKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7UP94 Pol protein

0.0e+00

98.01

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTN PAVFMDLMNRVFREFLDTFV
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
         ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALY K CRSP+CWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLM

Query:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

9.3e-134

33.86

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++  PA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKY--CRS
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ +Y    S
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKY--CRS

Query:  PVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRL
        P+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL+P F GPF +L++ GP  Y L
Subjt:  PVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRL

Query:  ALPPSLSTV-HDVFHVSMLRK
         LP S+  +    FHVS L K
Subjt:  ALPPSLSTV-HDVFHVSMLRK

P0CT35 Transposon Tf2-2 polyprotein

9.3e-134

33.86

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++  PA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKY--CRS
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ +Y    S
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKY--CRS

Query:  PVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRL
        P+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL+P F GPF +L++ GP  Y L
Subjt:  PVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRL

Query:  ALPPSLSTV-HDVFHVSMLRK
         LP S+  +    FHVS L K
Subjt:  ALPPSLSTV-HDVFHVSMLRK

P0CT36 Transposon Tf2-3 polyprotein

9.3e-134

33.86

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++  PA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKY--CRS
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ +Y    S
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKY--CRS

Query:  PVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRL
        P+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL+P F GPF +L++ GP  Y L
Subjt:  PVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRL

Query:  ALPPSLSTV-HDVFHVSMLRK
         LP S+  +    FHVS L K
Subjt:  ALPPSLSTV-HDVFHVSMLRK

P0CT37 Transposon Tf2-4 polyprotein

9.3e-134

33.86

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++  PA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKY--CRS
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ +Y    S
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKY--CRS

Query:  PVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRL
        P+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL+P F GPF +L++ GP  Y L
Subjt:  PVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRL

Query:  ALPPSLSTV-HDVFHVSMLRK
         LP S+  +    FHVS L K
Subjt:  ALPPSLSTV-HDVFHVSMLRK

P0CT41 Transposon Tf2-12 polyprotein

9.3e-134

33.86

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Query:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV
        +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++  PA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFV

Query:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKY--CRS
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ +Y    S
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSHQATIGMAPFEALYGKY--CRS

Query:  PVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRL
        P+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL+P F GPF +L++ GP  Y L
Subjt:  PVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRL

Query:  ALPPSLSTV-HDVFHVSMLRK
         LP S+  +    FHVS L K
Subjt:  ALPPSLSTV-HDVFHVSMLRK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.7e-27

45.8

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Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTGAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTCGACCAGTTACAGGGAGCCACAGTGTT
CTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGT
CCTTTGGTTTGACGAATGATCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGACATCTTGATATAC
TCCAAGACGGAGGCCGAACATGAGAAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGCTGAAGCAGGT
GTCCTTTCTGGGTCACGTGGTTTCTAAGGTTGGGGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCAACTGTCAGTGAGGTTCGTAGCT
TTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCA
TGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGG
TTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTTGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGG
TTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGACCATAAGAGCCTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGA
CAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTATCACATTCAGC
AGCACTTATTACCCGACAGGCCCCTTTGCATCGGGATCTCGAGCGGGCTGAGATCGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACAGTACAGCCGA
CTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAAGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGATGGT
GGACTTTTGTTCGAGAGACGCCTCTGTGTGCCGTCGGATAGTGCAGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAA
GATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGA
AACCAGCGGGTTTATTACAACCCTTGAGTATACCGGAATGGAAATGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGGACTCTGAGGGGTTTTACAGTGATT
TGGGTTGTGGTGGACAGGCTTACCAAGTCAGCACACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCCGAGATAGTGAGGTTGCA
TGGGGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACCGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCC
ATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATG
GAATTTGCCTATAATAACAGCCATCAGGCTACCATCGGCATGGCACCATTTGAGGCCTTGTACGGCAAATATTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCA
AAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGTGTAGGCAGAAGAGTTATGCAGATGTGAGGC
GGAAGGATCTCGAGTTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCGTGCGTTTTGAAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTCGGG
CCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

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MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNDPAVFMDLMNRVFREFLDTFVIVFIDDILIY
SKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA
CEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR
QRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDG
GLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVI
WVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLM
EFAYNNSHQATIGMAPFEALYGKYCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVG
PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

Cmc07g0197341 (gene) of Melon (Charmono) v1.1 genome