; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0197651 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0197651
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationCMiso1.1chr07:20966493..20968223
RNA-Seq ExpressionCmc07g0197651
SyntenyCmc07g0197651
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045000.1 uncharacterized protein E6C27_scaffold74G003100 [Cucumis melo var. makuwa]2.1e-125100Show/hide
Query:  MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF
        MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF
Subjt:  MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF

Query:  ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR
        ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR
Subjt:  ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR

Query:  AQICFSNNVSYAEVRNLALMEEQRINK
        AQICFSNNVSYAEVRNLALMEEQRINK
Subjt:  AQICFSNNVSYAEVRNLALMEEQRINK

TYK16471.1 uncharacterized protein E5676_scaffold21G002740 [Cucumis melo var. makuwa]6.2e-12599.56Show/hide
Query:  MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF
        MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF
Subjt:  MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF

Query:  ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR
        ASLRLKDAAFSWWMVLHTDLEADGVTVTWEK KELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR
Subjt:  ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR

Query:  AQICFSNNVSYAEVRNLALMEEQRINK
        AQICFSNNVSYAEVRNLALMEEQRINK
Subjt:  AQICFSNNVSYAEVRNLALMEEQRINK

XP_004147729.1 uncharacterized protein LOC101209793 [Cucumis sativus]2.6e-11591.63Show/hide
Query:  MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF
        MAQLEEVVSTVKTN+ LVAAEPSVNLGNVYDEICNLVSE+RIIAAKQTDEER+NKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSD+ KVSF
Subjt:  MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF

Query:  ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR
        A LRLKDAAFSWWMV+HTDLEADGVTVTW+K KELFEKRYLP WLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR
Subjt:  ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR

Query:  AQICFSNNVSYAEVRNLALMEEQRINK
         Q+C  NN S AE+RNLALM EQRINK
Subjt:  AQICFSNNVSYAEVRNLALMEEQRINK

XP_022931358.1 uncharacterized protein LOC111437567 isoform X1 [Cucurbita moschata]1.8e-7161.93Show/hide
Query:  VKTNNHLVAAEPSVNLGNVYDEICNLVSE-VRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRLKDAA
        +KTN  L+AAEP++NLG+V DEIC+L+ E +R++AA+QT+EE ++K + FF C+PP FGEDTDPLVA+RW+L LENIFD I CSD+QKVSFA LRLKD+A
Subjt:  VKTNNHLVAAEPSVNLGNVYDEICNLVSE-VRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRLKDAA

Query:  FSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRAQICFSNNV
         SWW+V    L ADG  VTWEK K+LF KRY P WLK EK REL  L QG+ TV EYDE+FI L+SL  E  PD++ EARLF +GLR DI  Q+CF++NV
Subjt:  FSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRAQICFSNNV

Query:  SYAEVRNLALMEEQRINK
        SY+++RN AL+ EQ +N+
Subjt:  SYAEVRNLALMEEQRINK

XP_023522569.1 uncharacterized protein LOC111786568 [Cucurbita pepo subsp. pepo]6.8e-7161.47Show/hide
Query:  VKTNNHLVAAEPSVNLGNVYDEICNLVSE-VRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRLKDAA
        +KTN  L+AAEP++NLG+V DEIC+L+ E +R++AA+QT+EE ++K + FF C+PP FGEDTDPLVA+RW+L LENIFD I CSD+Q VSFA LRLKD+A
Subjt:  VKTNNHLVAAEPSVNLGNVYDEICNLVSE-VRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRLKDAA

Query:  FSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRAQICFSNNV
         SWW+V    L ADG  VTWEK K+LF KRY P WLK EK REL  L QG+ TV EYDE+FI L+SL  E  PD++ EARLF +GLR DI  Q+CF++NV
Subjt:  FSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRAQICFSNNV

Query:  SYAEVRNLALMEEQRINK
        SY+++RN AL+ EQ +N+
Subjt:  SYAEVRNLALMEEQRINK

TrEMBL top hitse value%identityAlignment
A0A0A0L042 Retrotrans_gag domain-containing protein1.3e-11591.63Show/hide
Query:  MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF
        MAQLEEVVSTVKTN+ LVAAEPSVNLGNVYDEICNLVSE+RIIAAKQTDEER+NKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSD+ KVSF
Subjt:  MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF

Query:  ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR
        A LRLKDAAFSWWMV+HTDLEADGVTVTW+K KELFEKRYLP WLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR
Subjt:  ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR

Query:  AQICFSNNVSYAEVRNLALMEEQRINK
         Q+C  NN S AE+RNLALM EQRINK
Subjt:  AQICFSNNVSYAEVRNLALMEEQRINK

A0A5A7TP79 Retrotrans_gag domain-containing protein1.0e-125100Show/hide
Query:  MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF
        MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF
Subjt:  MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF

Query:  ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR
        ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR
Subjt:  ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR

Query:  AQICFSNNVSYAEVRNLALMEEQRINK
        AQICFSNNVSYAEVRNLALMEEQRINK
Subjt:  AQICFSNNVSYAEVRNLALMEEQRINK

A0A5D3CX20 Retrotrans_gag domain-containing protein3.0e-12599.56Show/hide
Query:  MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF
        MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF
Subjt:  MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSF

Query:  ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR
        ASLRLKDAAFSWWMVLHTDLEADGVTVTWEK KELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR
Subjt:  ASLRLKDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIR

Query:  AQICFSNNVSYAEVRNLALMEEQRINK
        AQICFSNNVSYAEVRNLALMEEQRINK
Subjt:  AQICFSNNVSYAEVRNLALMEEQRINK

A0A6J1EYB6 uncharacterized protein LOC111437567 isoform X18.6e-7261.93Show/hide
Query:  VKTNNHLVAAEPSVNLGNVYDEICNLVSE-VRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRLKDAA
        +KTN  L+AAEP++NLG+V DEIC+L+ E +R++AA+QT+EE ++K + FF C+PP FGEDTDPLVA+RW+L LENIFD I CSD+QKVSFA LRLKD+A
Subjt:  VKTNNHLVAAEPSVNLGNVYDEICNLVSE-VRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRLKDAA

Query:  FSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRAQICFSNNV
         SWW+V    L ADG  VTWEK K+LF KRY P WLK EK REL  L QG+ TV EYDE+FI L+SL  E  PD++ EARLF +GLR DI  Q+CF++NV
Subjt:  FSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRAQICFSNNV

Query:  SYAEVRNLALMEEQRINK
        SY+++RN AL+ EQ +N+
Subjt:  SYAEVRNLALMEEQRINK

A0A6J1EZ79 uncharacterized protein LOC111437567 isoform X26.4e-6761.95Show/hide
Query:  VNLGNVYDEICNLVSE-VRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRLKDAAFSWWMVLHTDLEA
        +NLG+V DEIC+L+ E +R++AA+QT+EE ++K + FF C+PP FGEDTDPLVA+RW+L LENIFD I CSD+QKVSFA LRLKD+A SWW+V    L A
Subjt:  VNLGNVYDEICNLVSE-VRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRLKDAAFSWWMVLHTDLEA

Query:  DGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRAQICFSNNVSYAEVRNLALMEE
        DG  VTWEK K+LF KRY P WLK EK REL  L QG+ TV EYDE+FI L+SL  E  PD++ EARLF +GLR DI  Q+CF++NVSY+++RN AL+ E
Subjt:  DGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRAQICFSNNVSYAEVRNLALMEE

Query:  QRINK
        Q +N+
Subjt:  QRINK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAATTGGAAGAAGTTGTTTCTACAGTGAAGACTAACAATCACTTAGTTGCAGCTGAACCATCAGTGAATTTGGGAAATGTTTATGACGAAATTTGCAAT
TTAGTAAGTGAAGTTAGGATTATTGCAGCTAAACAGACTGATGAAGAACGTTCCAACAAGTCTAGTATGTTTTTTGCCTGTGAACCTCCTAGTTTTGGAGAAGAC
ACTGATCCCTTAGTTGCTCAACGCTGGATTTTAATTTTAGAGAATATCTTTGATTTGATACGATGTTCAGACAAGCAAAAAGTTTCTTTCGCTAGTTTACGACTG
AAAGATGCTGCATTTTCTTGGTGGATGGTGTTGCATACGGACTTGGAGGCTGATGGGGTTACAGTTACGTGGGAGAAATTAAAAGAATTGTTTGAGAAGAGATAT
TTACCTCGTTGGTTGAAGCTGGAGAAGTTTCGTGAACTCTGTAATTTGGAGCAAGGAGATGGAACTGTAGCTGAGTATGATGAACAATTCATTAAGTTGGCTTCT
CTTGCTCACGAGTTTATTCCAGATGAAGCTTGGGAAGCTCGCTTGTTTGGTGATGGTTTAAGGGCAGATATTAGAGCACAAATTTGCTTCTCAAACAATGTGTCG
TACGCCGAGGTTAGAAACCTGGCATTAATGGAGGAACAGCGCATTAACAAATAA
mRNA sequenceShow/hide mRNA sequence
GAATGGGTATAAAACTCTCTTAATCTTTTCCTTTTTCTTTTCCTCAATCGACAATTATCTTCCTCCACTTATCTACTGCCATTTTTCATTTAGGGAAAAAGAATG
GCTCAATTGGAAGAAGTTGTTTCTACAGTGAAGACTAACAATCACTTAGTTGCAGCTGAACCATCAGTGAATTTGGGAAATGTTTATGACGAAATTTGCAATTTA
GTAAGTGAAGTTAGGATTATTGCAGCTAAACAGACTGATGAAGAACGTTCCAACAAGTCTAGTATGTTTTTTGCCTGTGAACCTCCTAGTTTTGGAGAAGACACT
GATCCCTTAGTTGCTCAACGCTGGATTTTAATTTTAGAGAATATCTTTGATTTGATACGATGTTCAGACAAGCAAAAAGTTTCTTTCGCTAGTTTACGACTGAAA
GATGCTGCATTTTCTTGGTGGATGGTGTTGCATACGGACTTGGAGGCTGATGGGGTTACAGTTACGTGGGAGAAATTAAAAGAATTGTTTGAGAAGAGATATTTA
CCTCGTTGGTTGAAGCTGGAGAAGTTTCGTGAACTCTGTAATTTGGAGCAAGGAGATGGAACTGTAGCTGAGTATGATGAACAATTCATTAAGTTGGCTTCTCTT
GCTCACGAGTTTATTCCAGATGAAGCTTGGGAAGCTCGCTTGTTTGGTGATGGTTTAAGGGCAGATATTAGAGCACAAATTTGCTTCTCAAACAATGTGTCGTAC
GCCGAGGTTAGAAACCTGGCATTAATGGAGGAACAGCGCATTAACAAATAATCAAGAAATTTGAAGTATTAAGAAAAGGGGTAATAGAAGCAAACAGATTTTGGA
GGTTTCAGCTATGAATCATCTGCACTTCTCAATGTAGGTATTGACTGCTAATTGTTAGTTCACTACTTCATCACTAGAAAGTTTCATAGCTTTAGGAAGTTTATT
TTGATAGTGTTTTGTTCTTCCCCTAAAAAAACAGAATTCCACACCCCCCTCTCTGGTCTAGGATTTATGGTAATGGTAGTCTTAAATACTTCTGTTTGGTGTGAA
GTTTATCAGCTTAATGTAAACAGTTCTTTGTTTCATTTTCATCCCACTAATATTTTCTATTGGTAATTTGATCTGTCACATGTTTTGTTTTCAAGTAGGT
Protein sequenceShow/hide protein sequence
MAQLEEVVSTVKTNNHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSFGEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRL
KDAAFSWWMVLHTDLEADGVTVTWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWEARLFGDGLRADIRAQICFSNNVS
YAEVRNLALMEEQRINK