CuGenDBv2

Gene ID	Cmc07g0198061
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag-Pol
Genome location	CMiso1.1chr07:21330881..21331765
RNA-Seq Expression	Cmc07g0198061
Synteny	Cmc07g0198061
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0009733 - response to auxin (biological process) GO:0015074 - DNA integration (biological process) GO:0016567 - protein ubiquitination (biological process) GO:0018108 - peptidyl-tyrosine phosphorylation (biological process) GO:0090501 - RNA phosphodiester bond hydrolysis (biological process) GO:0016020 - membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0004714 - transmembrane receptor protein tyrosine kinase activity (molecular function) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008234 - cysteine-type peptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR036875 - Zinc finger, CCHC-type superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0026163.1 Gag-Pol [Cucumis melo var. makuwa]

2.3e-111

75.26

Show/hide

Query:  KFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKL
        KF+IEKFNGTNFSLW LKMK + R DNCLEAIDK PAEITDDNKWNEMDGNAM NIHLAL DNVLSSI+EKKIAKEIWDHL KLYE KSLHNKIFLKRKL
Subjt:  KFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKL

Query:  YTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTVT
        YTLRMS ST MTEHMNTLNTLFSQL LLGYKIEPN+ AELLLQSL DSYDQLVINL NNIL DYLSFDDV + VLEEENR KNKEDKL++ QQAEALTVT
Subjt:  YTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTVT

Query:  RVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGATY
        R RPLE  +   + Q                             ++KD NPQGNVASTINEGGALSCEAVTT EG+K+M DGWFFDSGATY
Subjt:  RVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGATY

KAA0044949.1 hypothetical protein E6C27_scaffold74G002510 [Cucumis melo var. makuwa]

5.9e-152

98.23

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Query:  MTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKR
        MTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKR
Subjt:  MTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKR

Query:  KLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALT
        KLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALT
Subjt:  KLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALT

Query:  VTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMID
        VTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEG+   +D
Subjt:  VTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMID

KAA0061179.1 Gag-Pol [Cucumis melo var. makuwa]

2.2e-114

77.59

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Query:  FKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLY
        F+IEKFN TNFSLWKLKMK + RKDNCLE +DKRPAEI DD+KWNEMDGNA ANIHLAL DNVLSSIEEKK AKEIWDHL KLY+AKSLHNKIFLKRKLY
Subjt:  FKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLY

Query:  TLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTVTR
        TLRMS ST MTEHMN LNTLFSQLTLL YKIEPN+ AELLLQSLPDSYDQLVINLTNNILTDYLSFDDV + VLEEENR KNKEDKLVSSQQAEAL VTR
Subjt:  TLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTVTR

Query:  VRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGATY
         R  ECNSSGSKNQGRSKS+                                NVASTINEGGALSCEAVTTMEG+K+M DGWFFD GATY
Subjt:  VRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGATY

KAE8665938.1 hypothetical protein F3Y22_tig00112523pilonHSYRG00165 [Hibiscus syriacus]

9.6e-110

72.95

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Query:  TKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRK
        TKF IEKFNG NFSLWKLKMKAI RKD CL AI++RP +  DDNKWNEMDGNAM N HLAL D VLSSIEEKKIAKEIWDHL KLYEA SLHNKIFLKRK
Subjt:  TKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRK

Query:  LYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTV
        LYTLRM  ST +TEH+NTLNTLFSQLT L  KI   + AELLLQSLPDSYDQL+INLTN+ +T  L FDDVAA +L+EEN+CKNKEDK V+ QQAEALT 
Subjt:  LYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTV

Query:  TRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGATY
        TR R  E   S S   GRSKS+SKK +KCYNCGKKGH+KK+CW LNK   NPQGN A+T ++G AL CEA TT+EGRK+  D W  DSGATY
Subjt:  TRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGATY

TYK16527.1 hypothetical protein E5676_scaffold21G003420 [Cucumis melo var. makuwa]

1.4e-145

94.7

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Query:  MTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKR
        MTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLAL DNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKR
Subjt:  MTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKR

Query:  KLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALT
        KLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNK AELLLQSLPDSYDQLVINLTNNILTDYLSFDDV ATVLEEENRCKNKEDKLVSSQQAE LT
Subjt:  KLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALT

Query:  VTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMID
        VTRVRPLECNSSGSKNQGRSKSQSKK MKCYNCGKKGHVKKNCW+LNKKD NPQGNVASTINEG  LSC+AVTTMEG+   +D
Subjt:  VTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMID

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SNG9 Gag-Pol

1.1e-111

75.26

Show/hide

Query:  KFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKL
        KF+IEKFNGTNFSLW LKMK + R DNCLEAIDK PAEITDDNKWNEMDGNAM NIHLAL DNVLSSI+EKKIAKEIWDHL KLYE KSLHNKIFLKRKL
Subjt:  KFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKL

Query:  YTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTVT
        YTLRMS ST MTEHMNTLNTLFSQL LLGYKIEPN+ AELLLQSL DSYDQLVINL NNIL DYLSFDDV + VLEEENR KNKEDKL++ QQAEALTVT
Subjt:  YTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTVT

Query:  RVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGATY
        R RPLE  +   + Q                             ++KD NPQGNVASTINEGGALSCEAVTT EG+K+M DGWFFDSGATY
Subjt:  RVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGATY

A0A5A7TUN0 Uncharacterized protein

2.9e-152

98.23

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Query:  MTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKR
        MTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKR
Subjt:  MTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKR

Query:  KLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALT
        KLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALT
Subjt:  KLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALT

Query:  VTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMID
        VTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEG+   +D
Subjt:  VTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMID

A0A5A7V644 Gag-Pol

1.1e-114

77.59

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Query:  FKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLY
        F+IEKFN TNFSLWKLKMK + RKDNCLE +DKRPAEI DD+KWNEMDGNA ANIHLAL DNVLSSIEEKK AKEIWDHL KLY+AKSLHNKIFLKRKLY
Subjt:  FKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLY

Query:  TLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTVTR
        TLRMS ST MTEHMN LNTLFSQLTLL YKIEPN+ AELLLQSLPDSYDQLVINLTNNILTDYLSFDDV + VLEEENR KNKEDKLVSSQQAEAL VTR
Subjt:  TLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTVTR

Query:  VRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGATY
         R  ECNSSGSKNQGRSKS+                                NVASTINEGGALSCEAVTTMEG+K+M DGWFFD GATY
Subjt:  VRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGATY

A0A5D3CXA6 Uncharacterized protein

6.9e-146

94.7

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Query:  MTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKR
        MTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLAL DNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKR
Subjt:  MTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKR

Query:  KLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALT
        KLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNK AELLLQSLPDSYDQLVINLTNNILTDYLSFDDV ATVLEEENRCKNKEDKLVSSQQAE LT
Subjt:  KLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALT

Query:  VTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMID
        VTRVRPLECNSSGSKNQGRSKSQSKK MKCYNCGKKGHVKKNCW+LNKKD NPQGNVASTINEG  LSC+AVTTMEG+   +D
Subjt:  VTRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMID

A0A6A2WWQ1 Uncharacterized protein

4.6e-110

72.95

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Query:  TKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRK
        TKF IEKFNG NFSLWKLKMKAI RKD CL AI++RP +  DDNKWNEMDGNAM N HLAL D VLSSIEEKKIAKEIWDHL KLYEA SLHNKIFLKRK
Subjt:  TKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRK

Query:  LYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTV
        LYTLRM  ST +TEH+NTLNTLFSQLT L  KI   + AELLLQSLPDSYDQL+INLTN+ +T  L FDDVAA +L+EEN+CKNKEDK V+ QQAEALT 
Subjt:  LYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTV

Query:  TRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGATY
        TR R  E   S S   GRSKS+SKK +KCYNCGKKGH+KK+CW LNK   NPQGN A+T ++G AL CEA TT+EGRK+  D W  DSGATY
Subjt:  TRVRPLECNSSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGATY

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

3.6e-19

26.85

Show/hide

Query:  KFKIEKFNGTNFSLWKLKMKAISRKDNCLEAID-KRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRK
        K  I+ F+G  +++WK +++A+  + + L+ +D   P E+  D+ W + +  A + I   L D+ L+       A++I ++L  +YE KSL +++ L+++
Subjt:  KFKIEKFNGTNFSLWKLKMKAISRKDNCLEAID-KRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRK

Query:  LYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTV
        L +L++S    +  H +  + L S+L   G KIE       LL +LP  YD  +I     +  + L+   V   +L++E + KN  +   S +   A+  
Subjt:  LYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTV

Query:  TRVRPLECN---SSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWD----LNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGAT
              + N   +  +K +   K  SK K+KC++CG++GH+KK+C+     LN K+   +  V +  + G A   + V           G+  DSGA+
Subjt:  TRVRPLECN---SSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWD----LNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGAT

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

5.6e-28

35.34

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Query:  KFKIEKFNGTN-FSLWKLKMKAISRKDNCLEAID---KRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFL
        K+++ KFNG N FS W+ +M+ +  +    + +D   K+P  +  ++ W ++D  A + I L L D+V+++I ++  A+ IW  L  LY +K+L NK++L
Subjt:  KFKIEKFNGTN-FSLWKLKMKAISRKDNCLEAID---KRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFL

Query:  KRKLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEA
        K++LY L MS  T    H+N  N L +QL  LG KIE    A LLL SLP SYD L   + +   T  +   DV + +L  E   K  E     +Q    
Subjt:  KRKLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEA

Query:  LTVTRVRPLECNSSG---SKNQGRSKSQSKKKMK-CYNCGKKGHVKKNC
        +T  R R  + +S+    S  +G+SK++SK +++ CYNC + GH K++C
Subjt:  LTVTRVRPLECNSSG---SKNQGRSKSQSKKKMK-CYNCGKKGHVKKNC

Arabidopsis top hits

e value

%identity

Alignment

AT4G00980.1 zinc knuckle (CCHC-type) family protein

2.3e-08

22.68

Show/hide

Query:  KIEKFNGTNFSLWKLKMKAISRK--------DNC-----LEAIDKRPAEIT----DDNKWNEMDGNAMANIHLALVDNVLSSIEEK-KIAKEIWDHLIKL
        KI +F+G ++  W  +M+   ++        + C      +  +  P EIT       KW   D     ++  +L D++     +K K AKE+WD L  +
Subjt:  KIEKFNGTNFSLWKLKMKAISRK--------DNC-----LEAIDKRPAEIT----DDNKWNEMDGNAMANIHLALVDNVLSSIEEK-KIAKEIWDHLIKL

Query:  YEAKSLHNKIFLKRKLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNK
        Y+     +K    RK    RM     + E +   N +   +   G  ++   H   ++   P S+      L      +YL    +   V  EE   +N 
Subjt:  YEAKSLHNKIFLKRKLYTLRMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNK

Query:  EDKLVSSQQAEALTVTRVRPLECNSSGSKNQGRSKSQSKKKMK----CYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVT
           +       +  + R   L     GS++ G  + + ++  +    C NCG+KGH+ K+CW  +K D    G  ++ IN   A   E+ T
Subjt:  EDKLVSSQQAEALTVTRVRPLECNSSGSKNQGRSKSQSKKKMK----CYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACAAAGTTCAAGATTGAGAAGTTCAACGGAACTAATTTCTCGTTATGGAAGTTGAAGATGAAGGCTATCTCTAGAAAAGATAATTGTCTTGAAGCCATCGAT
AAGAGGCCAGCAGAGATTACAGATGACAACAAGTGGAACGAGATGGATGGAAATGCTATGGCAAACATTCATTTAGCATTAGTTGATAATGTGTTGTCAAGCATT
GAGGAGAAGAAAATTGCAAAGGAGATTTGGGACCATCTCATTAAACTGTATGAGGCCAAATCACTTCACAACAAGATTTTCCTTAAGAGGAAGTTGTACACTCTT
CGGATGTCTGGATCCACATTAATGACAGAGCATATGAATACATTGAATACTTTATTTTCTCAACTCACATTATTGGGTTATAAAATAGAGCCAAATAAACATGCA
GAACTTCTACTTCAAAGTCTTCCTGATTCATATGATCAACTTGTCATCAATTTGACAAATAATATTCTAACTGACTATTTAAGCTTTGATGATGTTGCTGCTACT
GTCTTAGAAGAGGAAAACCGATGCAAGAACAAAGAAGATAAGTTGGTAAGTTCACAACAAGCAGAAGCCTTGACAGTGACAAGAGTTAGACCATTGGAATGCAAC
TCAAGTGGGAGCAAAAATCAAGGAAGGTCAAAGTCACAAAGTAAGAAGAAAATGAAGTGCTACAATTGTGGAAAGAAGGGACATGTGAAGAAGAATTGTTGGGAT
CTAAACAAGAAAGATTTCAATCCTCAAGGAAATGTAGCAAGCACCATAAATGAAGGTGGCGCCTTGTCTTGTGAAGCAGTGACAACTATGGAAGGTAGAAAAAAA
ATGATTGATGGATGGTTCTTCGACTCAGGAGCCACTTATCAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

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MTKFKIEKFNGTNFSLWKLKMKAISRKDNCLEAIDKRPAEITDDNKWNEMDGNAMANIHLALVDNVLSSIEEKKIAKEIWDHLIKLYEAKSLHNKIFLKRKLYTL
RMSGSTLMTEHMNTLNTLFSQLTLLGYKIEPNKHAELLLQSLPDSYDQLVINLTNNILTDYLSFDDVAATVLEEENRCKNKEDKLVSSQQAEALTVTRVRPLECN
SSGSKNQGRSKSQSKKKMKCYNCGKKGHVKKNCWDLNKKDFNPQGNVASTINEGGALSCEAVTTMEGRKKMIDGWFFDSGATYQ

Cmc07g0198061 (gene) of Melon (Charmono) v1.1 genome