CuGenDBv2

Gene ID	Cmc07g0198111
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty1-copia retrotransposon protein
Genome location	CMiso1.1chr07:21356255..21358655
RNA-Seq Expression	Cmc07g0198111
Synteny	Cmc07g0198111
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase IPR025724 - GAG-pre-integrase domain IPR036397 - Ribonuclease H superfamily IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0056761.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

72.77

Show/hide

Query:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
        MGNSAT GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
Subjt:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA

Query:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK
        NLWHGRLGHVNFASIRKLKD+RLINTSETHETGKC +CIESKFHKKPFKPVEYR TELLELIHS+LADFRTTASRGGKNYYVSFVDDYSR+ KIYLI+TK
Subjt:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK

Query:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------
        NEAVSMF+KFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM             
Subjt:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------

Query:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR
         IP+KRLDKTPYELWKGHAPNLSYLKVWGCL KVP PALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDK+INESRDAEFFEHVFPLKQSLYAPSLSNR
Subjt:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR

Query:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT
        MHDPEIVSE PVSETVDTPNLSCELE RRSKRQR EKSFGPDFLSTFIVE RDEIDCNFTNL+LIDEDPKTYQEALNSVDS MWKEAIKSELDSL MNHT
Subjt:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT

Query:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE
        WELVDLPMGNKPIR                                                                                      
Subjt:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE

Query:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV
                                                                                                      LGEADV
Subjt:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV

Query:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD
        ILGVKIRKNKTSLSLCQSHYVEKILKKF SFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMN TRPDIAYAVSRLSRYTHNPNRYHWD
Subjt:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD

TYK04394.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

73.15

Show/hide

Query:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
        MGNSAT GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
Subjt:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA

Query:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK
        NLWHGRLGHVNFASIRKLKD+RLINTSETHETGKCP+CIESKFHKKPFKPVEYR TELLELIHS+LADFRTTASRGGKNYYVSFVDDYSRF KIYLI+TK
Subjt:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK

Query:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------
        NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM             
Subjt:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------

Query:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR
         IP+KRLDKTPYELWKGHAPNLSYLKVWGCL KVP PALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDK+INESRDAEFFEHVFPLKQSLYAPSLSNR
Subjt:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR

Query:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT
        MHDPEIVSE PVSETVDTPNLSCELE RRSKRQR EKSFGPDFLSTFIVE RDEIDCNFTNL+LIDEDPKTYQEALNSVDS MWKEAIKSELDSL MNHT
Subjt:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT

Query:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE
        WELVDLPMGNKPIR                                                                                      
Subjt:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE

Query:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV
                                                                                                      LGEADV
Subjt:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV

Query:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD
        ILGVKIRKNKTSLSLCQSHYVEKILKKF SFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMN TRPDIAYAVSRLSRYTHNPNRYHWD
Subjt:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD

TYK05597.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

73.02

Show/hide

Query:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
        MGNSAT GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
Subjt:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA

Query:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK
        NLWHGRLGHVNFASIRKLKD+RLINTSETHETGKC +CIESKFHKKPFKPVEYR TELLELIHS+LADFRTTASRGGKNYYVSFVDDYSRF KIYLI+TK
Subjt:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK

Query:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------
        NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM             
Subjt:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------

Query:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR
         IP+KRLDKTPYELWKGHAPNLSYLKVWGCL KVP PALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDK+INESRDAEFFEHVFPLKQSLYAPSLSNR
Subjt:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR

Query:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT
        MHDPEIVSE PVSETVDTPNLSCELE RRSKRQR EKSFGPDFLSTFIVE RDEIDCNFTNL+LIDEDPKTYQEALNSVDS MWKEAIKSELDSL MNHT
Subjt:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT

Query:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE
        WELVDLPMGNKPIR                                                                                      
Subjt:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE

Query:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV
                                                                                                      LGEADV
Subjt:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV

Query:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD
        ILGVKIRKNKTSLSLCQSHYVEKILKKF SFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMN TRPDIAYAVSRLSRYTHNPNRYHWD
Subjt:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD

TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

95.11

Show/hide

Query:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
        MGNSAT GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
Subjt:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA

Query:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK
        NLWHGRLGHVNFASIRKLKD+RLINTSETHETGKC +CIESKFHKKPFKPVEYR TELLELIHS+LADFRTTASRGGKNYYVSFVDDYSR+ KIYLI+TK
Subjt:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK

Query:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------
        NEAVSMF+KFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM             
Subjt:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------

Query:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR
         IP+KRLDKTPYELWKGHAPNLSYLKVWGCL KVP PALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDK+INESRDAEFFEHVFPLKQSLYAPSLSNR
Subjt:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR

Query:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT
        MHDPEIVSE PVSETVDTPNLSCELE RRSKRQR EKSFGPDFLSTFIVE RDEIDCNFTNL+LIDEDPKTYQEALNSVDS MWKEAIKSELDSL MNHT
Subjt:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT

Query:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE
        WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNG+LEEEIYMTQPE
Subjt:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE

Query:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV
        GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTK+FLSSHFEMKDLGEADV
Subjt:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV

Query:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD
        ILGVKIRKNKTSLSLCQSHYVEKILKKF SFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMN TRPDIAYAVSRLSRYTHNPNRYHWD
Subjt:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD

TYK11299.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

73.02

Show/hide

Query:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
        MGNSAT GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDF+GKGYLSNGLFVLNTISMNANASSSAYLIESA
Subjt:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA

Query:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK
        NLWHGRLGHVNFASIRKLKD+RLINTSETHETGKC +CIESKFHKKPFKPVEYR TELLELIHS+LADFRTTASRGGKNYYVSFVDDYSRF KIYLIKTK
Subjt:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK

Query:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------
        NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM             
Subjt:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------

Query:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR
         IP+KRLDKTPYELWKGHAPNLSYLKVWGCL KVP PALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDK+INESRDAEFFEHVFPLKQSLYAPSLSNR
Subjt:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR

Query:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT
        MHDPEIVSE PVSETVDTPNLSCELE RRSKRQR EKSFGPDFLSTFIVE RDEIDCNFTNL+LIDEDPKTYQEALNSVDS MWKEAIKSELDSL MNHT
Subjt:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT

Query:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE
        WELVDLPMGNKPIR                                                                                      
Subjt:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE

Query:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV
                                                                                                      LGEADV
Subjt:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV

Query:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD
        ILGVKIRKNKTSLSLCQSHYVEKILKKF SFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMN TRPDIAYAVSRLSRYTHNPNRYHWD
Subjt:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD

TrEMBL top hits

e value

%identity

Alignment

A0A5D3BZI1 Ty1-copia retrotransposon protein

0.0e+00

73.15

Show/hide

Query:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
        MGNSAT GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
Subjt:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA

Query:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK
        NLWHGRLGHVNFASIRKLKD+RLINTSETHETGKCP+CIESKFHKKPFKPVEYR TELLELIHS+LADFRTTASRGGKNYYVSFVDDYSRF KIYLI+TK
Subjt:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK

Query:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------
        NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM             
Subjt:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------

Query:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR
         IP+KRLDKTPYELWKGHAPNLSYLKVWGCL KVP PALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDK+INESRDAEFFEHVFPLKQSLYAPSLSNR
Subjt:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR

Query:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT
        MHDPEIVSE PVSETVDTPNLSCELE RRSKRQR EKSFGPDFLSTFIVE RDEIDCNFTNL+LIDEDPKTYQEALNSVDS MWKEAIKSELDSL MNHT
Subjt:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT

Query:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE
        WELVDLPMGNKPIR                                                                                      
Subjt:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE

Query:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV
                                                                                                      LGEADV
Subjt:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV

Query:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD
        ILGVKIRKNKTSLSLCQSHYVEKILKKF SFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMN TRPDIAYAVSRLSRYTHNPNRYHWD
Subjt:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD

A0A5D3C1A6 Ty1-copia retrotransposon protein

0.0e+00

73.02

Show/hide

Query:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
        MGNSAT GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
Subjt:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA

Query:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK
        NLWHGRLGHVNFASIRKLKD+RLINTSETHETGKC +CIESKFHKKPFKPVEYR TELLELIHS+LADFRTTASRGGKNYYVSFVDDYSRF KIYLI+TK
Subjt:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK

Query:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------
        NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM             
Subjt:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------

Query:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR
         IP+KRLDKTPYELWKGHAPNLSYLKVWGCL KVP PALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDK+INESRDAEFFEHVFPLKQSLYAPSLSNR
Subjt:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR

Query:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT
        MHDPEIVSE PVSETVDTPNLSCELE RRSKRQR EKSFGPDFLSTFIVE RDEIDCNFTNL+LIDEDPKTYQEALNSVDS MWKEAIKSELDSL MNHT
Subjt:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT

Query:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE
        WELVDLPMGNKPIR                                                                                      
Subjt:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE

Query:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV
                                                                                                      LGEADV
Subjt:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV

Query:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD
        ILGVKIRKNKTSLSLCQSHYVEKILKKF SFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMN TRPDIAYAVSRLSRYTHNPNRYHWD
Subjt:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD

A0A5D3C5T2 Ty1-copia retrotransposon protein

0.0e+00

95.11

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Query:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
        MGNSAT GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
Subjt:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA

Query:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK
        NLWHGRLGHVNFASIRKLKD+RLINTSETHETGKC +CIESKFHKKPFKPVEYR TELLELIHS+LADFRTTASRGGKNYYVSFVDDYSR+ KIYLI+TK
Subjt:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK

Query:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------
        NEAVSMF+KFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM             
Subjt:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------

Query:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR
         IP+KRLDKTPYELWKGHAPNLSYLKVWGCL KVP PALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDK+INESRDAEFFEHVFPLKQSLYAPSLSNR
Subjt:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR

Query:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT
        MHDPEIVSE PVSETVDTPNLSCELE RRSKRQR EKSFGPDFLSTFIVE RDEIDCNFTNL+LIDEDPKTYQEALNSVDS MWKEAIKSELDSL MNHT
Subjt:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT

Query:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE
        WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNG+LEEEIYMTQPE
Subjt:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE

Query:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV
        GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTK+FLSSHFEMKDLGEADV
Subjt:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV

Query:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD
        ILGVKIRKNKTSLSLCQSHYVEKILKKF SFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMN TRPDIAYAVSRLSRYTHNPNRYHWD
Subjt:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD

A0A5D3CM58 Ty1-copia retrotransposon protein

0.0e+00

73.02

Show/hide

Query:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
        MGNSAT GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDF+GKGYLSNGLFVLNTISMNANASSSAYLIESA
Subjt:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA

Query:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK
        NLWHGRLGHVNFASIRKLKD+RLINTSETHETGKC +CIESKFHKKPFKPVEYR TELLELIHS+LADFRTTASRGGKNYYVSFVDDYSRF KIYLIKTK
Subjt:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK

Query:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------
        NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM             
Subjt:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------

Query:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR
         IP+KRLDKTPYELWKGHAPNLSYLKVWGCL KVP PALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDK+INESRDAEFFEHVFPLKQSLYAPSLSNR
Subjt:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR

Query:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT
        MHDPEIVSE PVSETVDTPNLSCELE RRSKRQR EKSFGPDFLSTFIVE RDEIDCNFTNL+LIDEDPKTYQEALNSVDS MWKEAIKSELDSL MNHT
Subjt:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT

Query:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE
        WELVDLPMGNKPIR                                                                                      
Subjt:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE

Query:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV
                                                                                                      LGEADV
Subjt:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV

Query:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD
        ILGVKIRKNKTSLSLCQSHYVEKILKKF SFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMN TRPDIAYAVSRLSRYTHNPNRYHWD
Subjt:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD

A0A5D3DSQ3 Ty1-copia retrotransposon protein

0.0e+00

72.77

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Query:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
        MGNSAT GVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
Subjt:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA

Query:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK
        NLWHGRLGHVNFASIRKLKD+RLINTSETHETGKC +CIESKFHKKPFKPVEYR TELLELIHS+LADFRTTASRGGKNYYVSFVDDYSR+ KIYLI+TK
Subjt:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK

Query:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------
        NEAVSMF+KFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM             
Subjt:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNM-------------

Query:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR
         IP+KRLDKTPYELWKGHAPNLSYLKVWGCL KVP PALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDK+INESRDAEFFEHVFPLKQSLYAPSLSNR
Subjt:  -IPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNR

Query:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT
        MHDPEIVSE PVSETVDTPNLSCELE RRSKRQR EKSFGPDFLSTFIVE RDEIDCNFTNL+LIDEDPKTYQEALNSVDS MWKEAIKSELDSL MNHT
Subjt:  MHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHT

Query:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE
        WELVDLPMGNKPIR                                                                                      
Subjt:  WELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPE

Query:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV
                                                                                                      LGEADV
Subjt:  GFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADV

Query:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD
        ILGVKIRKNKTSLSLCQSHYVEKILKKF SFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMN TRPDIAYAVSRLSRYTHNPNRYHWD
Subjt:  ILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

1.6e-98

30.31

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Query:  ILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGY-LSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFAS
        I++L +   ++L +VL+      NL+S   L  AG+ I  +   V ++KNG  V K   + N + V+N  + + NA        +  LWH R GH++   
Subjt:  ILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGY-LSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHVNFAS

Query:  IRKLK------DLRLINTSETHETGKCPVCIESKFHKKPFKPVEYR--ITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTKNEAVSM
        + ++K      D  L+N  E      C  C+  K  + PFK ++ +  I   L ++HS++    T  +   KNY+V FVD ++ +   YLIK K++  SM
Subjt:  IRKLK------DLRLINTSETHETGKCPVCIESKFHKKPFKPVEYR--ITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTKNEAVSM

Query:  FVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSD--------------NMIPYKR
        F  F A+SE     ++  L  D G EY    +++FC   GI +  T P++PQ NG++ER  RT+ E    M+  + L                N IP + 
Subjt:  FVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSD--------------NMIPYKR

Query:  L---DKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQN------SAAYRFMCLNDKSINESR----DAEFFEHVFPLKQSLY
        L    KTPYE+W    P L +L+V+G    V     K+     K+F  IF+GY  N      +   +F+   D  ++E+      A  FE VF LK S  
Subjt:  L---DKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQN------SAAYRFMCLNDKSINESR----DAEFFEHVFPLKQSLY

Query:  A-----------------PSLSNRMHDPEIVSETPVSETVDTPNLSCEL---------------------------------------------------
        +                 P+ S    + + + ++  SE  + PN S ++                                                   
Subjt:  A-----------------PSLSNRMHDPEIVSETPVSETVDTPNLSCEL---------------------------------------------------

Query:  EARRSKRQRIEKSFGPDFLS----TFIVEMRDE----------------IDCNFTNLYLIDED-PKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELV
        E+R S+     K  G D  +      I+  R E                ++    N + I  D P ++ E     D S W+EAI +EL++  +N+TW + 
Subjt:  EARRSKRQRIEKSFGPDFLS----TFIVEMRDE----------------IDCNFTNLYLIDED-PKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELV

Query:  DLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPEGFKI
          P     +  +W+F  K    G   RYKARLV  G+TQK  +DY +T++PV +I++ R +++L   +NL +HQMDVKTAFLNG L+EEIYM  P+G  I
Subjt:  DLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPEGFKI

Query:  SGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVG--ADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVIL
        S   + VCKL K++YGLKQA + W+E F   L    F  +S D C+Y    G   + I + LYVDD++I   +M  + + K +L   F M DL E    +
Subjt:  SGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVG--ADCILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVIL

Query:  GVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHW
        G++I   +  + L QS YV+KIL KF   + + V TP  +  + +    D         +IG +MY+M CTRPD+  AV+ LSRY+   N   W
Subjt:  GVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHW

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

6.3e-143

36.97

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Query:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA
        MGN++   + G G + +K   G TL L +V +VP LR NL+SG  L+R G +      K  LTK    + KG     L+  N        +++   I S 
Subjt:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESA

Query:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK
        +LWH R+GH++   ++ L    LI+ ++      C  C+  K H+  F+    R   +L+L++S++       S GG  Y+V+F+DD SR   +Y++KTK
Subjt:  NLWHGRLGHVNFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTK

Query:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSD--------------N
        ++   +F KF A  E + G+++KRLRSD GGEY+ +  +E+C S+GI HE T P +PQ NG+AER NRT+ E + +ML  + L                N
Subjt:  NEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSD--------------N

Query:  MIPYKRLD-KTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFP------------
          P   L  + P  +W     + S+LKV+GC      P  ++T +  K+  CIFIGY      YR      K +  SRD  F E                
Subjt:  MIPYKRLD-KTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFP------------

Query:  -LKQSLYAPSLSNRMHDPEIVSETPVSETVDTPNLSCE----------------------LEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYL
         +   +  PS SN     E  ++  VSE  + P    E                         RRS+R R+E    P   ST  V + D           
Subjt:  -LKQSLYAPSLSNRMHDPEIVSETPVSETVDTPNLSCE----------------------LEARRSKRQRIEKSFGPDFLSTFIVEMRDEIDCNFTNLYL

Query:  IDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRA
         D +P++ +E L+  + +   +A++ E++SL  N T++LV+LP G +P++CKW+FK K   +  + RYKARLVV G+ QK+G+D+ + +SPV K+T+IR 
Subjt:  IDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRA

Query:  LIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGA-DCILIC
        +++LAA  +L + Q+DVKTAFL+GDLEEEIYM QPEGF+++G+++ VCKL KSLYGLKQAP+QWY KF++ + +  +    SD CVY K     + I++ 
Subjt:  LIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGA-DCILIC

Query:  LYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTS--LSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKK--------NKGDS
        LYVDDMLI G +  LI   K  LS  F+MKDLG A  ILG+KI + +TS  L L Q  Y+E++L++F   +  PV TP      L K         KG+ 
Subjt:  LYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTS--LSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKK--------NKGDS

Query:  VSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD
           P Y+  +GS+MY M CTRPDIA+AV  +SR+  NP + HW+
Subjt:  VSQPEYAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD

P25600 Putative transposon Ty5-1 protein YCL074W

9.7e-27

34.25

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Query:  MDVKTAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMEL
        MDV TAFLN  ++E IY+ QP GF      + V +L   +YGLKQAP  W E  NNTL   GF  +  +  +Y +      I I +YVDD+L+   + ++
Subjt:  MDVKTAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMEL

Query:  ITDTKFFLSSHFEMKDLGEADVILGVKIRKNKT-SLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQ-PEYAKIIGSVMYLMNCTRPD
            K  L+  + MKDLG+ D  LG+ I ++    ++L    Y+ K   +         +TP   SK L +     +     Y  I+G +++  N  RPD
Subjt:  ITDTKFFLSSHFEMKDLGEADVILGVKIRKNKT-SLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQ-PEYAKIIGSVMYLMNCTRPD

Query:  IAYAVSRLSRYTHNPNRYH
        I+Y VS LSR+   P   H
Subjt:  IAYAVSRLSRYTHNPNRYH

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

6.6e-92

28.56

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Query:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLL---NRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLF-----VLNTISMNANASS
        + + +T+ +   G   L  T  + L+L N+LYVP++ +NL+S   L   N   ++      +V     G  + +G   + L+         +S+ A+ SS
Subjt:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLL---NRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLF-----VLNTISMNANASS

Query:  SAYLIESANLWHGRLGHVNFASIRK-LKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRF
         A    + + WH RLGH   + +   + +  L   + +H+   C  C+ +K +K PF       T  LE I+S++       S     YYV FVD ++R+
Subjt:  SAYLIESANLWHGRLGHVNFASIRK-LKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRF

Query:  NKIYLIKTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMIPY-
          +Y +K K++    F+ FK   EN+   RI    SD GGE+    L E+   +GI H  + P++P+ NG++ERK+R + E    +L  + +     PY 
Subjt:  NKIYLIKTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMIPY-

Query:  --------KRLD------KTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQ
                 RL       ++P++   G +PN   L+V+GC          +  +  K+  C+F+GY+   +AY  + L    +  SR   F E+ FP   
Subjt:  --------KRLD------KTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQ

Query:  SLY------------------------------APSLSNRMH----------------------DPEIVSETPVS----------------------ETV
         L                               APS S+  H                      D    S  P S                      +T 
Subjt:  SLY------------------------------APSLSNRMH----------------------DPEIVSETPVS----------------------ETV

Query:  DTPNLSCELEARRSKRQRIEKSFGPDFLSTF------------------------------IVEMRDEIDCNFTNL------YLIDEDPK----------
         + N S       S  Q  +    P   S+                               IV   ++   N  ++       +I  +PK          
Subjt:  DTPNLSCELEARRSKRQRIEKSFGPDFLSTF------------------------------IVEMRDEIDCNFTNL------YLIDEDPK----------

Query:  -TYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPI-RCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIAL
           + A+ ++    W+ A+ SE+++ + NHTW+LV  P  +  I  C+WIF +K   +G + RYKARLV  GY Q+ G+DY +T+SPV K T+IR ++ +
Subjt:  -TYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPI-RCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALIAL

Query:  AAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDD
        A   +  I Q+DV  AFL G L +++YM+QP GF    + N VCKLRK+LYGLKQAP+ WY +  N L+T GF  + SDT ++    G   + + +YVDD
Subjt:  AAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDD

Query:  MLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSVM
        +LI G +  L+ +T   LS  F +KD  E    LG++ ++  T L L Q  Y+  +L +       PV TP   S  L    G  ++ P EY  I+GS+ 
Subjt:  MLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSVM

Query:  YLMNCTRPDIAYAVSRLSRYTHNPNRYH
        YL   TRPDI+YAV+RLS++ H P   H
Subjt:  YLMNCTRPDIAYAVSRLSRYTHNPNRYH

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

1.0e-92

28.01

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Query:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLL---NRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLF-----VLNTISMNANASS
        + + +T+ +   G   L  TS ++L L+ VLYVP++ +NL+S   L   NR  ++      +V     G  + +G   + L+         +SM A+  S
Subjt:  MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLL---NRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLF-----VLNTISMNANASS

Query:  SAYLIESANLWHGRLGHVNFA---SIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYS
         A    + + WH RLGH + A   S+     L ++N S  H+   C  C  +K HK PF       ++ LE I+S++       S     YYV FVD ++
Subjt:  SAYLIESANLWHGRLGHVNFA---SIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYS

Query:  RFNKIYLIKTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMIP
        R+  +Y +K K++    F+ FK+  EN+   RI  L SD GGE+    L+++   +GI H  + P++P+ NG++ERK+R + EM   +L  + +     P
Subjt:  RFNKIYLIKTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMIP

Query:  Y---------KRLD------KTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPL
        Y          RL       ++P++   G  PN   LKV+GC          +  +  K+  C F+GY+   +AY  + +    +  SR  +F E  FP 
Subjt:  Y---------KRLD------KTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTVGPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPL

Query:  --------------------------------------------------------------------KQSLYAPSLS---------------------N
                                                                              S+ +PS S                     +
Subjt:  --------------------------------------------------------------------KQSLYAPSLS---------------------N

Query:  RMHDPEIVSETPVSETVDTPNLSCELEAR-------RSKRQRIEKSFGPDFLSTF------------IVEMRDEIDCN--------------------FT
          + P + +  P S + ++PN +  L           +    I +   P   ST             I+++  +   N                    + 
Subjt:  RMHDPEIVSETPVSETVDTPNLSCELEAR-------RSKRQRIEKSFGPDFLSTF------------IVEMRDEIDCN--------------------FT

Query:  NLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPI-RCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKI
             + +P+T   A+ ++    W++A+ SE+++ + NHTW+LV  P  +  I  C+WIF +K   +G + RYKARLV  GY Q+ G+DY +T+SPV K 
Subjt:  NLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPI-RCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKI

Query:  TTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADC
        T+IR ++ +A   +  I Q+DV  AFL G L +E+YM+QP GF    + + VC+LRK++YGLKQAP+ WY +    L+T GF  + SDT ++    G   
Subjt:  TTIRALIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADC

Query:  ILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQP-E
        I + +YVDD+LI G +  L+  T   LS  F +K+  +    LG++ ++    L L Q  Y   +L +       PV TP   S  L  + G  +  P E
Subjt:  ILICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQP-E

Query:  YAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD
        Y  I+GS+ YL   TRPD++YAV+RLS+Y H P   HW+
Subjt:  YAKIIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWD

Arabidopsis top hits

e value

%identity

Alignment

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8

9.5e-70

40.12

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Query:  EDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALI
        ++P TY EA   +   +W  A+  E+ ++   HTWE+  LP   KPI CKW++K K   +G IERYKARLV  GYTQ++G+D+ +T+SPV K+T+++ ++
Subjt:  EDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRALI

Query:  ALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPEGFKI----SGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILI
        A++AI+N  +HQ+D+  AFLNGDL+EEIYM  P G+      S   N VC L+KS+YGLKQA +QW+ KF+ TLI  GF  + SD   + K+     + +
Subjt:  ALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPEGFKI----SGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILI

Query:  CLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNK-GDSVSQPEYAK
         +YVDD++I   N   + + K  L S F+++DLG     LG++I ++   +++CQ  Y   +L + G     P   P D S     +  GD V    Y +
Subjt:  CLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNK-GDSVSQPEYAK

Query:  IIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYH
        +IG +MYL   TR DI++AV++LS+++  P   H
Subjt:  IIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYH

ATMG00810.1 DNA/RNA polymerases superfamily protein

2.5e-17

35.04

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Query:  ICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAK
        + LYVDD+L+ G++  L+    F LSS F MKDLG     LG++I+ + + L L Q+ Y E+IL   G  D  P+ TP     +   +        ++  
Subjt:  ICLYVDDMLIFGTNMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAK

Query:  IIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWDV
        I+G++ YL   TRPDI+YAV+ + +  H P    +D+
Subjt:  IIGSVMYLMNCTRPDIAYAVSRLSRYTHNPNRYHWDV

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)

1.6e-16

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Query:  IDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRA
        I ++PK+   AL       W +A++ ELD+L  N TW LV  P+    + CKW+FK K   +G ++R KARLV  G+ Q++G+ + +TYSPV +  TIR 
Subjt:  IDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRA

Query:  LIALA
        ++ +A
Subjt:  LIALA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAAACTCAGCCACTGTAGGAGTAATCGGGAAAGGGAAGGTTATTTTAAAGCTAACTTCCGGCAAAACTTTATCTTTAAGTAATGTTCTATATGTCCCTTCCCTACG
TAGGAACCTGGTGTCTGGGAGTCTGTTGAATCGGGCTGGGCTTAAAATTGTGCTAGAAGGTGACAAAGTTGTCCTCACAAAAAATGGAGATTTTGTCGGTAAGGGGTATC
TGTCTAATGGTCTATTTGTGCTAAACACGATTTCTATGAATGCAAATGCTTCCAGTTCTGCTTACTTGATTGAATCTGCAAACTTATGGCATGGTAGACTAGGACATGTG
AACTTTGCATCAATTAGAAAACTTAAAGACTTGAGACTCATTAATACCTCTGAGACGCATGAAACTGGTAAATGTCCTGTTTGCATAGAAAGTAAATTCCATAAGAAGCC
CTTCAAACCAGTTGAATATAGAATTACTGAGCTGTTAGAATTAATTCACTCAAATCTAGCAGACTTTAGAACCACTGCTAGTAGAGGTGGTAAAAACTACTATGTATCCT
TTGTTGATGATTACTCTAGATTCAATAAGATATACCTGATAAAAACAAAAAATGAAGCTGTCAGTATGTTCGTAAAATTCAAGGCAGAATCTGAGAATCAGTTAGGAAAA
AGGATAAAAAGATTAAGATCAGATAGAGGTGGTGAGTATTCCGATAAAACTCTTAAAGAATTTTGTGAATCAAATGGTATCATCCATGAATTTACTGCTCCCTACTCACC
ACAACAAAATGGCATAGCAGAACGAAAAAATAGAACTCTTAAAGAAATGATGAATGCCATGTTATTAAGCTCCGGTCTATCTGATAATATGATTCCCTACAAAAGGCTAG
ACAAAACTCCATACGAACTCTGGAAAGGACATGCACCAAATCTTTCCTACCTAAAGGTCTGGGGATGCTTGCCTAAGGTACCATTTCCTGCATTGAAGAAAACTACGGTA
GGACCTAAAACCTTTGACTGCATTTTTATCGGGTATGCTCAAAATAGTGCTGCATATAGGTTTATGTGTTTAAATGACAAATCTATAAACGAATCTAGAGATGCAGAATT
CTTTGAGCATGTTTTTCCGTTAAAACAATCGTTGTATGCTCCTAGCCTATCTAACAGAATGCATGATCCTGAAATCGTTAGTGAAACACCTGTTTCTGAAACTGTTGATA
CTCCAAACCTAAGTTGTGAATTAGAAGCTAGGAGAAGTAAAAGACAAAGAATTGAGAAAAGTTTCGGTCCAGATTTCCTAAGCACCTTCATAGTGGAAATGCGTGATGAA
ATTGACTGTAACTTCACAAACTTGTACTTAATAGATGAGGATCCTAAAACTTACCAAGAAGCGCTAAACTCTGTAGATTCAAGTATGTGGAAAGAGGCCATTAAAAGTGA
ATTGGACTCACTGGTCATGAATCATACATGGGAACTGGTGGATCTTCCTATGGGAAACAAGCCAATTAGATGTAAGTGGATCTTTAAAAGGAAAACAAAACCAAATGGAT
TAATAGAAAGATACAAGGCTAGATTAGTGGTAGTAGGATATACCCAAAAACAAGGTGTTGACTATTTCGACACCTATTCCCCTGTAACTAAGATAACCACAATTAGGGCC
TTGATTGCTTTGGCCGCAATACATAATCTTCTTATTCATCAAATGGACGTAAAAACAGCCTTTTTAAATGGTGACTTAGAAGAAGAAATTTATATGACACAACCAGAAGG
CTTTAAAATCTCTGGGCAAGAAAACAAAGTGTGTAAACTGAGAAAGTCCCTATACGGTCTCAAGCAAGCTCCCAAACAGTGGTACGAAAAATTTAACAATACGTTGATAA
CCAATGGATTTAAAATAAATTCCTCTGACACATGTGTTTATTCAAAGATGGTTGGAGCTGATTGCATATTAATATGTCTATACGTTGACGACATGTTAATCTTTGGAACA
AACATGGAGTTAATAACTGACACTAAGTTTTTCCTCTCATCACACTTTGAAATGAAAGACCTGGGAGAAGCAGACGTAATTCTAGGTGTTAAAATCAGGAAAAACAAAAC
CAGTTTGTCTCTATGTCAATCTCATTACGTAGAGAAAATACTAAAGAAGTTTGGCTCCTTTGATGTTTCTCCTGTGAGAACTCCCTTTGACGCTAGTAAACATCTTAAGA
AGAATAAAGGAGATAGTGTGTCTCAACCAGAATATGCAAAGATCATAGGCAGTGTGATGTATTTAATGAACTGCACTAGACCAGATATTGCATATGCTGTCAGTAGATTG
AGTAGATATACACACAATCCTAATAGATACCACTGGGATGTAAGTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGNSATVGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGDFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHV
NFASIRKLKDLRLINTSETHETGKCPVCIESKFHKKPFKPVEYRITELLELIHSNLADFRTTASRGGKNYYVSFVDDYSRFNKIYLIKTKNEAVSMFVKFKAESENQLGK
RIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMIPYKRLDKTPYELWKGHAPNLSYLKVWGCLPKVPFPALKKTTV
GPKTFDCIFIGYAQNSAAYRFMCLNDKSINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSETPVSETVDTPNLSCELEARRSKRQRIEKSFGPDFLSTFIVEMRDE
IDCNFTNLYLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQGVDYFDTYSPVTKITTIRA
LIALAAIHNLLIHQMDVKTAFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGT
NMELITDTKFFLSSHFEMKDLGEADVILGVKIRKNKTSLSLCQSHYVEKILKKFGSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNCTRPDIAYAVSRL
SRYTHNPNRYHWDVS

Cmc07g0198111 (gene) of Melon (Charmono) v1.1 genome