; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc07g0198761 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0198761
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionarabinogalactan peptide 22-like
Genome locationCMiso1.1chr07:21839459..21840960
RNA-Seq ExpressionCmc07g0198761
SyntenyCmc07g0198761
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577157.1 Arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. sororia]6.9e-2287.14Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
        MAVSR SF  +AA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADLSN+
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN

XP_004149756.1 arabinogalactan protein 41 [Cucumis sativus]1.3e-2397.01Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSRSSF LLAATALIFAIFLPVAHP SLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

XP_008451971.1 PREDICTED: arabinogalactan peptide 22-like [Cucumis melo]1.4e-27100Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNL
        MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNL
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNL

XP_022931316.1 arabinogalactan peptide 22-like [Cucurbita moschata]4.1e-2287.14Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
        MAVSR+SF  +AA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADLSN+
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN

XP_038882280.1 arabinogalactan protein 22-like [Benincasa hispida]6.9e-2289.86Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSN
        MAVS +SF  LAA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSN
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSN

TrEMBL top hitse value%identityAlignment
A0A0A0KZS8 Uncharacterized protein6.1e-2497.01Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSRSSF LLAATALIFAIFLPVAHP SLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

A0A1S3BS55 arabinogalactan peptide 22-like7.0e-28100Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNL
        MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNL
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNL

A0A5D3CYF3 Arabinogalactan peptide 22-like7.0e-28100Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNL
        MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNL
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNL

A0A6J1C4C2 arabinogalactan peptide 22-like3.3e-2285.71Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
        MAVSR+SF  +AA ALIFAIFLPVAHP SL PAPAP+SDGTSIDQGIAYVLM+VALALTYLIHNADLSN+
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN

A0A6J1ETC6 arabinogalactan peptide 22-like2.0e-2287.14Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
        MAVSR+SF  +AA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADLSN+
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 167.2e-1462.69Show/hide
Query:  SRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
        SR+S    A  + +FA+ L +A   SLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH  D S++
Subjt:  SRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN

Q8L9T8 Arabinogalactan protein 418.5e-1568.25Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        M+ SR  F +    ++IFAI LP+AH  S APAPAPTSDGT+IDQGIAYVLM+VAL LTYLIH
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH

Q9FK16 Arabinogalactan protein 221.6e-1366.67Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        MA  +   E+LA   +I  I LP+A   S +PAPAPTSDGTSIDQGIAYVLMMVALALTY IH
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH

Q9M373 Arabinogalactan protein 201.1e-1462.69Show/hide
Query:  SRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
        SR+S  ++A  A +FA+  P A   SLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH  D S++
Subjt:  SRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 165.1e-1562.69Show/hide
Query:  SRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
        SR+S    A  + +FA+ L +A   SLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH  D S++
Subjt:  SRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN

AT3G61640.1 arabinogalactan protein 207.9e-1662.69Show/hide
Query:  SRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
        SR+S  ++A  A +FA+  P A   SLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH  D S++
Subjt:  SRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN

AT5G24105.1 arabinogalactan protein 416.0e-1668.25Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        M+ SR  F +    ++IFAI LP+AH  S APAPAPTSDGT+IDQGIAYVLM+VAL LTYLIH
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH

AT5G53250.1 arabinogalactan protein 221.1e-1466.67Show/hide
Query:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        MA  +   E+LA   +I  I LP+A   S +PAPAPTSDGTSIDQGIAYVLMMVALALTY IH
Subjt:  MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTCTAGGTCGTCTTTTGAACTTTTGGCTGCCACTGCCCTCATCTTTGCCATCTTCTTGCCCGTTGCTCACCCTCTTTCCTTGGCTCCCGCACCCGCT
CCCACCAGCGATGGGACATCCATAGATCAAGGAATAGCTTATGTATTGATGATGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCAAACAAC
CTCTAA
mRNA sequenceShow/hide mRNA sequence
TAACGGAAAGAAAAAGAGAGAATAAAGAATAAAAACCTAACCCTATAAAACGCAGTGGTTGAAAGATTTGATTTCCTCCGTCTCTCTCTCCCATCGCTAAACACT
TCCTCTGTTTCCGTTCAGAGATTTCTTCTTCATTTCGCCTTTCGAGGAGGGAAAGGAAAGAGAGATTCCTTTCTCTCTCTCTCTCTCTCTGCGATCCTCTTCAAC
CCATTGAAGCCCACACCCATCGCAGAGAGAGATCCTCCACACCACCATTCTCACTCCAATGGCGGTTTCTAGGTCGTCTTTTGAACTTTTGGCTGCCACTGCCCT
CATCTTTGCCATCTTCTTGCCCGTTGCTCACCCTCTTTCCTTGGCTCCCGCACCCGCTCCCACCAGCGATGGGACATCCATAGATCAAGGAATAGCTTATGTATT
GATGATGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCAAACAACCTCTAAAAGATTTTTATCAAAGCATTTGTAGAACATCTTTGATCAAA
GGGAGGGAAAGGATTTTAGTTAGAAATGAATGCAAGTGGGGTTTTTGAGGGAATTTGATTCTTTTTTTTTTTTTTTTTTTTTTTGCACATTGTAATTCCTTTGGA
ACCCTCTTTTGATCAAAGGAGAAGGGAATTTAGTTAGAAATGCAAATGGGTTTTGAGGGATTTTATTACTATTTTTTTTTTTTTTGTTTTAATTTTTCATAGTAG
TTCATTTGGGTGTTTCTGTTTTTTGGTCTTTATTTCTAATGATGAGTCTGATTGTGTGGTCTCTTTGTATTGCTATGTACAGTCTCCTAATTTGGAATGAGATTT
ATTGGGGTTTCCCTATTTTTCTTTATTCCTTCCTCCCTCTTATTTTTATCTTGTTTTTTTTTG
Protein sequenceShow/hide protein sequence
MAVSRSSFELLAATALIFAIFLPVAHPLSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNL