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Cmc07g0199251 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0199251
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A .
Genome locationCMiso1.1chr07:22250683..22254926
RNA-Seq ExpressionCmc07g0199251
SyntenyCmc07g0199251
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044831.1 uncharacterized protein E6C27_scaffold74G001230 [Cucumis melo var. makuwa]1.2e-51100Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLR
        VLDAATKGNRYINSSLR
Subjt:  VLDAATKGNRYINSSLR
KAG7015189.1 hypothetical protein SDJN02_22822 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4681.88Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNST-----TSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAG
        MEQSP+DSS +SIE   QIPATSPNS      T S +EDCT+ +SSLS T+I +AI+VVEKDSLAIAESFTSLFASLRS LSEVTSNSIDHMHCFNDAAG
Subjt:  MEQSPADSSTTSIETECQIPATSPNST-----TSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAG

Query:  RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQLF
        RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL+
Subjt:  RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQLF
TYK16633.1 uncharacterized protein E5676_scaffold21G004610 [Cucumis melo var. makuwa]1.2e-51100Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLR
        VLDAATKGNRYINSSLR
Subjt:  VLDAATKGNRYINSSLR
XP_004146523.1 uncharacterized protein LOC101210623 [Cucumis sativus]1.1e-5796.21Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQ QIL+AIEVVEKDSLA+AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
XP_008452025.1 PREDICTED: uncharacterized protein LOC103493156 [Cucumis melo]3.2e-60100Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
TrEMBL top hitse value%identityAlignment
A0A0A0KWT2 Uncharacterized protein5.4e-5896.21Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQ QIL+AIEVVEKDSLA+AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
A0A1S3BTP0 uncharacterized protein LOC1034931561.5e-60100Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  VLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
A0A5A7TTI6 Uncharacterized protein5.8e-52100Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLR
        VLDAATKGNRYINSSLR
Subjt:  VLDAATKGNRYINSSLR
A0A5D3CXL4 Uncharacterized protein5.8e-52100Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  VLDAATKGNRYINSSLR
        VLDAATKGNRYINSSLR
Subjt:  VLDAATKGNRYINSSLR
A0A6J1EUG1 uncharacterized protein LOC1114376681.6e-4682.48Show/hide
Query:  MEQSPADSSTTSIETECQIPATSPNST-----TSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAG
        MEQSP+DSS +SIE   QIPATSPNS      T S +EDCT+ +SSLS T+I +AI+VVEKDSLAIAESFTSLFASLRS LSEVTSNSIDHMHCFNDAAG
Subjt:  MEQSPADSSTTSIETECQIPATSPNST-----TSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAG

Query:  RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
Subjt:  RLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23330.1 BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1)2.3e-2472.15Show/hide
Query:  SSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRL
        SSL+Q +IL+ +  VEKDS AIAESF+SLF SLRS LSE T +S+DHM CF +AAGRLQE+ LDAATKGNRYINS LRL
Subjt:  SSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRL
AT4G23330.2 unknown protein2.8e-3070.97Show/hide
Query:  SSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL
        SSL+Q +IL+ +  VEKDS AIAESF+SLF SLRS LSE T +S+DHM CF +AAGRLQE+ LDAATKGNRYINS LRLN+E+KG++NLAA+L
Subjt:  SSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAATCTCCGGCGGATTCTTCCACGACGAGCATCGAAACTGAATGTCAGATTCCAGCGACATCTCCAAATTCGACCACTTCTTCTGACGTTGAAGATTGCACCAA
AACCCAATCTTCTTTGAGCCAAACCCAGATTCTCGAAGCCATTGAAGTCGTTGAGAAGGATTCTCTCGCCATTGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTGCGCT
CGGTCCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCAGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCAACGAAGGGCAATCGA
TACATTAATTCTTCCTTGAGATTAAATCAGGAAATGAAAGGCATGGATAATCTAGCTGCTCAGCTGTTTTGA
mRNA sequenceShow/hide mRNA sequence
TCCCTAAATTCAACTACCAACTCCAACCCATTTATTGAACTTCACAAAAGAAACTAAAATCTAACCACCAATGAATTACTAAGAGAAGCGCTTTGGTGGAGCAATGGCCT
GGTCCTAATGGGAACTCAAAAGAAACCCAATTTTCGAATTGATTTTCAAGACTCTTTGAGAAATGGAGCAATCTCCGGCGGATTCTTCCACGACGAGCATCGAAACTGAA
TGTCAGATTCCAGCGACATCTCCAAATTCGACCACTTCTTCTGACGTTGAAGATTGCACCAAAACCCAATCTTCTTTGAGCCAAACCCAGATTCTCGAAGCCATTGAAGT
CGTTGAGAAGGATTCTCTCGCCATTGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTGCGCTCGGTCCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCT
TCAACGATGCAGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCAACGAAGGGCAATCGATACATTAATTCTTCCTTGAGATTAAATCAGGAAATGAAAGGCATGGAT
AATCTAGCTGCTCAGCTGTTTTGAGGAAGAATGTGGATGAACTTGACTTGGCTGTGAACAAGCTCCTTAATTTTCCATGAGCTCCGCTTGGTCGTATCGTCGCTCTTGCA
AGCTTAAGGATTTTTGTTTTCCCCAAAGAGAAAATACAGTTCATGAAGAAAAATATTCATTCCATAGCTTCCTTCACATTTTACTCTAGGAAGCATCTCATTGCATGTTA
GGTTCTTTGATGTATTTATCCAGAAATAGATTTTCTTGATCGCTTAATAATGTATACTGGTTTGTGGTTTCGATAGTTATAAGGGTCTCTTTTCCTTGGAGGCTATTCAG
CTTTTGAGAGTTTTGTTCATAGACGCTATATATTATATTTATTTATATTTTTATCTTTTTTAAAAAAAATTAAA
Protein sequenceShow/hide protein sequence
MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNR
YINSSLRLNQEMKGMDNLAAQLF