| GenBank top hits | e value | %identity | Alignment |
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| KAG6600626.1 DNA-directed RNA polymerases II, IV and V subunit 8B, partial [Cucurbita argyrosperma subsp. sororia] | 2.6e-68 | 88.36 | Show/hide |
Query: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MA LLF+D+FKVKCVNPDGKKYDKVSRI+ARSEKLSM MLLDVNTEIYPIDEG+K+LMVLSPTLNYDG+PVT Y Q+GKKSLADKFEYIMHGK YKL+D
Subjt: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQM+LKGDP++CAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
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| XP_004149143.1 DNA-directed RNA polymerases II, IV and V subunit 8B isoform X1 [Cucumis sativus] | 1.1e-74 | 97.26 | Show/hide |
Query: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAGLLFND+FKVKCVNPDGKKYDKVSRI+ARSEKLSM MLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Subjt: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMLLKGDPI+CAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
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| XP_008453774.1 PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like [Cucumis melo] | 2.0e-76 | 100 | Show/hide |
Query: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Subjt: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
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| XP_022929200.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita moschata] | 1.7e-70 | 93.79 | Show/hide |
Query: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MA LLFNDVFKVKCVNPDGKKYDKVSRI+ARSEKLSM MLLDVNTEIYPIDEGEK+LMVLSPTLNYDG+PVTSY QEGKKSLADKFEYIMHGK YKLSD
Subjt: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMLLKGDPI+CAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKL
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| XP_022983196.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita maxima] | 7.0e-69 | 89.04 | Show/hide |
Query: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MA +LF+D+FKVKCVNPDGKKYDKVSRI+ARSEKLSM MLLDVNTEIYPIDEG+K+LMVLSPTLNYDG+PVTSY QEGKKSLADKFEYIMHGK YKL+D
Subjt: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQM+LKGDP++CAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KZC2 Uncharacterized protein | 5.4e-75 | 97.26 | Show/hide |
Query: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAGLLFND+FKVKCVNPDGKKYDKVSRI+ARSEKLSM MLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Subjt: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMLLKGDPI+CAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
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| A0A1S3BY97 DNA-directed RNA polymerases II and V subunit 8A-like | 9.8e-77 | 100 | Show/hide |
Query: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Subjt: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
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| A0A5A7TNG5 DNA-directed RNA polymerases II and V subunit 8A-like | 9.8e-77 | 100 | Show/hide |
Query: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Subjt: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKLT
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| A0A6J1ETP8 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 8.0e-71 | 93.79 | Show/hide |
Query: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MA LLFNDVFKVKCVNPDGKKYDKVSRI+ARSEKLSM MLLDVNTEIYPIDEGEK+LMVLSPTLNYDG+PVTSY QEGKKSLADKFEYIMHGK YKLSD
Subjt: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMLLKGDPI+CAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKL
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| A0A6J1J454 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 8.0e-71 | 93.79 | Show/hide |
Query: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MA LLFNDVFKVKCVNPDGKKYDKVSRI+ARSEKLSM MLLDVNTEIYPIDEGEK+LMVLSPTLNYDG+PVTSY QEGKKSLADKFEYIMHGK YKLSD
Subjt: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKL
EGSGSDLKVEVYASFGGLQMLLKGDPI+CAKFRVDQNMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XT81 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 9.2e-32 | 44.14 | Show/hide |
Query: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAG++F+D+F VK V+PDGKK+D+VSR +E M +++D+N++IYP+ + +K +VL+ TL DG D + + ++EY+M+GK Y+L D
Subjt: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSD-LKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRK
+ SG+D ++ YASFGGL M LKG+ IN F VD N++LL++K
Subjt: EGSGSD-LKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRK
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| O81097 DNA-directed RNA polymerases II and V subunit 8A | 1.4e-40 | 57.04 | Show/hide |
Query: LLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSDEGS
+LF D+F V ++PDGKK+DKV+R+ A S L M M LDVNTE+YP+ G+K + L+PTLN DG+P T Y KK+LADK+EYIMHGK YK+S E
Subjt: LLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSDEGS
Query: GSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKL
G K E+Y SFGGL MLLKGDP + + F +DQ +FLL+RKL
Subjt: GSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKL
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| P52434 DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 1.0e-30 | 42.57 | Show/hide |
Query: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGS-PVTSYKDQEGKKSLADKFEYIMHGKTYKLS
MAG+LF D+F VK ++P+GKK+D+VSR+ SE M ++LDVN +IYP+D G+K +V++ TL DG+ Y + + S AD+FEY+M+GK Y++
Subjt: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGS-PVTSYKDQEGKKSLADKFEYIMHGKTYKLS
Query: DEGSGSD--LKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKL
+ + ++ ++ Y S+GGL M L+GD N F VD ++LL++KL
Subjt: DEGSGSD--LKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKL
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| Q19826 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 1.4e-32 | 44.83 | Show/hide |
Query: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
MAG++F+D+FKVK V+PDGKK+D+VSR +E M +++D+N++IYP+ + +K+ +VL+ TL DG D + + ++EY+M+GK Y+L D
Subjt: MAGLLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD
Query: EGSGSD-LKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRK
+ +G+D K+ YASFGGL M LKG+ IN F VD N++LL++K
Subjt: EGSGSD-LKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRK
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| Q9M1A8 DNA-directed RNA polymerases II, IV and V subunit 8B | 1.4e-40 | 55.63 | Show/hide |
Query: LLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSDEGS
++F D+F V ++PDGKK+DKV+R++ARS L M M LDVNTE+YP+ G+K + ++PTLN DG+P T Y KK+LADK+EYIMHGK YK+S E
Subjt: LLFNDVFKVKCVNPDGKKYDKVSRIDARSEKLSMSMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSDEGS
Query: GSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKL
G K E+Y SFGGL MLL+GDP + + F +DQ +FLL+RKL
Subjt: GSDLKVEVYASFGGLQMLLKGDPINCAKFRVDQNMFLLLRKL
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