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Cmc07g0203111 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc07g0203111
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionsnRNA-activating protein complex subunit-like
Genome locationCMiso1.1chr07:24956966..24958516
RNA-Seq ExpressionCmc07g0203111
SyntenyCmc07g0203111
Gene Ontology termsGO:0042795 - snRNA transcription by RNA polymerase II (biological process)
GO:0042796 - snRNA transcription by RNA polymerase III (biological process)
GO:0005634 - nucleus (cellular component)
GO:0019185 - snRNA-activating protein complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001006 - RNA polymerase III type 3 promoter sequence-specific DNA binding (molecular function)
GO:0001046 - core promoter sequence-specific DNA binding (molecular function)
GO:0003681 - bent DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044534.1 snRNA-activating protein complex subunit-like [Cucumis melo var. makuwa]2.1e-35100Show/hide
Query:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLLFFERLVQLLGDVSNVKKRRERGGE
        MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLLFFERLVQLLGDVSNVKKRRERGGE
Subjt:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLLFFERLVQLLGDVSNVKKRRERGGE
TYK17049.1 snRNA-activating protein complex subunit-like isoform X1 [Cucumis melo var. makuwa]3.8e-21100Show/hide
Query:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
        MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
Subjt:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
TYK29378.1 snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo var. makuwa]8.5e-2198.15Show/hide
Query:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
        MEARDRAGAS+EIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
Subjt:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
XP_008459095.1 PREDICTED: snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo]8.5e-2198.15Show/hide
Query:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
        MEARDRAGAS+EIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
Subjt:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
XP_016901523.1 PREDICTED: snRNA-activating protein complex subunit-like [Cucumis melo]3.8e-21100Show/hide
Query:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
        MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
Subjt:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
TrEMBL top hitse value%identityAlignment
A0A1S3CAL2 snRNA-activating protein complex subunit-like isoform X34.1e-2198.15Show/hide
Query:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
        MEARDRAGAS+EIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
Subjt:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
A0A1S4DZX0 snRNA-activating protein complex subunit-like1.8e-21100Show/hide
Query:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
        MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
Subjt:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
A0A5A7TN54 snRNA-activating protein complex subunit-like1.0e-35100Show/hide
Query:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLLFFERLVQLLGDVSNVKKRRERGGE
        MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLLFFERLVQLLGDVSNVKKRRERGGE
Subjt:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLLFFERLVQLLGDVSNVKKRRERGGE
A0A5D3D338 snRNA-activating protein complex subunit-like isoform X11.8e-21100Show/hide
Query:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
        MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
Subjt:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
A0A5D3E0W6 snRNA-activating protein complex subunit-like isoform X34.1e-2198.15Show/hide
Query:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
        MEARDRAGAS+EIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
Subjt:  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGAGAGACAGGGCTGGAGCTTCAGAGGAGATTGGTCTTAATGGAGATGGCCTCTCAATTCCTTTGGGTGGGCCTATATATGCACCCAACTTGGTTGGT
CCCCTCACCAGGGTCCCTCACTTTGAGTCTTCTGTTGTTCAAGAATTTCAGAGTCTTCTGTTCTTCGAACGACTGGTTCAACTACTGGGGGATGTCAGTAACGTG
AAGAAAAGGAGAGAGAGAGGCGGTGAGTGA
mRNA sequenceShow/hide mRNA sequence
CTTCCGTTGTGTAGATCGACGGATTTTGTAGGTTTTGGAGCAATTTCTCCATGGCTGCGATCCCGGCGGTGGCGGCAGTGACGGGTTCAGTTTCTCCTAGGTAAA
CGGGTGGTTGCAACGCGGGCCTAGGGAACAGATTAGTCAAAAGTTGGGTCGTTACCAGAGCCATGGAGGCGAGAGACAGGGCTGGAGCTTCAGAGGAGATTGGTC
TTAATGGAGATGGCCTCTCAATTCCTTTGGGTGGGCCTATATATGCACCCAACTTGGTTGGTCCCCTCACCAGGGTCCCTCACTTTGAGTCTTCTGTTGTTCAAG
AATTTCAGAGTCTTCTGTTCTTCGAACGACTGGTTCAACTACTGGGGGATGTCAGTAACGTGAAGAAAAGGAGAGAGAGAGGCGGTGAGTGAAGAAAGAGAAGGA
GAAAAGAGTCGGATCTAACCTGAAGAAACGGAGGGAGAGACGTTGCATTGCGTGTGAAGGGGAGAAGACAGAGATATGAATCTCATTCTTTTTGTATTAAGCATA
CATGTCAAAGGCCACTATGTGACAAAAACATATATAATATTAAAGATATATATTAGGG
Protein sequenceShow/hide protein sequence
MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLLFFERLVQLLGDVSNVKKRRERGGE