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Cmc08g0207681 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0207681
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionF-box domain-containing protein
Genome locationCMiso1.1chr08:785446..786297
RNA-Seq ExpressionCmc08g0207681
SyntenyCmc08g0207681
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052509.1 F-box protein SKIP19-like [Cucumis melo var. makuwa]3.6e-4497.73Show/hide
Query:  MESASMIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG
        MESASMIRKPEAPARNWLELPADVIFMILQKLG IEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAV+RTCG
Subjt:  MESASMIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG

KAF7842921.1 F-box protein SKIP19-like [Senna tora]7.3e-2168Show/hide
Query:  RNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDH-LEIMCKHAVKRTCG
        RNWL+LP DV   IL KLGAIEIL +AQ VC LW +ICKDPL+W  IDMHNS DL S +H LEIMC+HA+ R+CG
Subjt:  RNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDH-LEIMCKHAVKRTCG

XP_011658525.1 putative F-box/LRR-repeat protein 23 [Cucumis sativus]4.0e-3586.75Show/hide
Query:  MIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG
        MI+K E PARNWLELPA+VIF+IL KLGAIEILTTAQNVC LWYKICKDP LW VIDMHNSGDLNSFDHLEIMCKHAV R+CG
Subjt:  MIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG

XP_021285555.1 LOW QUALITY PROTEIN: putative F-box/LRR-repeat protein 23 [Herrania umbratica]2.1e-2067.09Show/hide
Query:  EAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFD-HLEIMCKHAVKRTCG
        EA  RNWLELP DV   IL +LGAIEIL  AQNVC  W KICKDPL+W  IDMHN GD+   D  LEIMC HAV R+CG
Subjt:  EAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFD-HLEIMCKHAVKRTCG

XP_038883506.1 F-box protein SKIP19-like [Benincasa hispida]1.3e-2570.79Show/hide
Query:  MESASMIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDH-LEIMCKHAVKRTCG
        MES S+I+  EA ARNWL+LPA+V+ MIL KLGAIEILT+AQNVC  W KICKDPL+W VIDM NSG+L   DH LEIMC+HAV R+CG
Subjt:  MESASMIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDH-LEIMCKHAVKRTCG

TrEMBL top hitse value%identityAlignment
A0A0A0KI84 F-box domain-containing protein1.9e-3586.75Show/hide
Query:  MIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG
        MI+K E PARNWLELPA+VIF+IL KLGAIEILTTAQNVC LWYKICKDP LW VIDMHNSGDLNSFDHLEIMCKHAV R+CG
Subjt:  MIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG

A0A0A0KP25 F-box domain-containing protein2.2e-2364.52Show/hide
Query:  MESASMIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVID------MHNSGDLNSFDHLEIMCKHAVKRTC
        ME ASMIRK EAPARNWLELPA+V+ +ILQKLGA+EILTTAQNVC L YKICKDP LW VI+      +HN  D N   + + +CK AV R C
Subjt:  MESASMIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVID------MHNSGDLNSFDHLEIMCKHAVKRTC

A0A5D3CNY7 F-box protein SKIP19-like1.7e-4497.73Show/hide
Query:  MESASMIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG
        MESASMIRKPEAPARNWLELPADVIFMILQKLG IEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAV+RTCG
Subjt:  MESASMIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG

A0A6J1AFD6 LOW QUALITY PROTEIN: putative F-box/LRR-repeat protein 231.0e-2067.09Show/hide
Query:  EAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFD-HLEIMCKHAVKRTCG
        EA  RNWLELP DV   IL +LGAIEIL  AQNVC  W KICKDPL+W  IDMHN GD+   D  LEIMC HAV R+CG
Subjt:  EAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFD-HLEIMCKHAVKRTCG

A0A6J1CXS5 F-box protein SKIP19-like1.7e-2066.67Show/hide
Query:  ARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG
        ARNWLELPAD+  MIL KLGAIEIL++AQ+VC LW KICKDPL+W V+DMHN G+ +    LE MC  AV R+CG
Subjt:  ARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 222.4e-1140.24Show/hide
Query:  IRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG
        + K E    NW ELP D++  IL +L  +EIL  A+ VC  W ++ KDPL+W  IDM N   L     +E  C+H V  + G
Subjt:  IRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG

Q9M0U7 Putative F-box protein At4g054753.3e-0833.72Show/hide
Query:  SASMIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG
        S   ++K +    NW++LP ++   IL +L   +IL  A+ +C  W +ICKDP +W  I++ +   +  FD  E MC+H V  + G
Subjt:  SASMIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG

Q9M0U9 F-box protein SKIP199.2e-1958.11Show/hide
Query:  NWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDH-LEIMCKHAVKRTCG
        NW ELP ++   IL +LGAIEIL  AQ VC  W ++CKDP +W  IDMHN GDL+  D+ LEIMC+HAV R+ G
Subjt:  NWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDH-LEIMCKHAVKRTCG

Q9S9V8 Putative F-box/LRR-repeat protein 97.8e-1041.67Show/hide
Query:  MESASMIRKPEA----PARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDL-NS---FDHLEIMCKHAVKRTCG
        M S+S    P+A      RNW ELP ++   IL +LGAIEIL  AQ VC  W ++C+DP +W  ID+    +L NS   F  +E +C  AV  + G
Subjt:  MESASMIRKPEA----PARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDL-NS---FDHLEIMCKHAVKRTCG

Q9S9V9 Putative F-box/LRR-repeat protein 231.6e-1552Show/hide
Query:  RNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDH-LEIMCKHAVKRTCG
        RNW ELP+ +   IL +LGAIEIL  AQ VC  W+++CKDP +W  ID+ N  D  +F + LE MC+HAV R+ G
Subjt:  RNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDH-LEIMCKHAVKRTCG

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein6.5e-2058.11Show/hide
Query:  NWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDH-LEIMCKHAVKRTCG
        NW ELP ++   IL +LGAIEIL  AQ VC  W ++CKDP +W  IDMHN GDL+  D+ LEIMC+HAV R+ G
Subjt:  NWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDH-LEIMCKHAVKRTCG

AT4G05470.1 RNI-like superfamily protein4.0e-0940.54Show/hide
Query:  RNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG
        RNW++LP ++   IL +L   +IL  AQ VC  W +ICKDP +W  I+  +    N FD +  MC+H V  + G
Subjt:  RNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG

AT4G05475.1 RNI-like superfamily protein2.3e-0933.72Show/hide
Query:  SASMIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG
        S   ++K +    NW++LP ++   IL +L   +IL  A+ +C  W +ICKDP +W  I++ +   +  FD  E MC+H V  + G
Subjt:  SASMIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG

AT4G05490.1 RNI-like superfamily protein1.7e-1240.24Show/hide
Query:  IRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG
        + K E    NW ELP D++  IL +L  +EIL  A+ VC  W ++ KDPL+W  IDM N   L     +E  C+H V  + G
Subjt:  IRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG

AT4G05497.1 RNI-like superfamily protein5.6e-1141.67Show/hide
Query:  MESASMIRKPEA----PARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDL-NS---FDHLEIMCKHAVKRTCG
        M S+S    P+A      RNW ELP ++   IL +LGAIEIL  AQ VC  W ++C+DP +W  ID+    +L NS   F  +E +C  AV  + G
Subjt:  MESASMIRKPEA----PARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDL-NS---FDHLEIMCKHAVKRTCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCGGCCTCCATGATTCGGAAGCCGGAAGCCCCAGCGAGGAATTGGCTTGAACTGCCCGCAGACGTAATCTTTATGATTCTGCAGAAGCTAGGCGCTATTGAAAT
ACTTACCACGGCTCAAAATGTCTGCTTTTTGTGGTATAAGATCTGCAAGGATCCTCTTTTGTGGTGTGTCATCGATATGCACAACTCTGGTGATTTGAATAGTTTTGATC
ATTTGGAGATTATGTGTAAACACGCTGTCAAACGTACTTGTGGTTAG
mRNA sequenceShow/hide mRNA sequence
TTGTGGAACATTTTTTTTTTATATAATTTAGCCAAGAACAAACGTTTCAATTTCCGTCACCAAATATGGATGCATACATCAGATATTTCAATGGATAGCATGTTCGGCCC
TATTTCCCAACAGTCCATATATTCTTCATTCGCCAATGCAGAATATCAATCCCATCATTTACTGCGATTTCATGGCCAAGCCCTAATCTCCATTTCAATATTCTTCTCAC
AAATGCTATATATATATATATATACACACGCGCGCGCGCGTCATACAGTCCTTCCGTTTTTTAGTATATTTTCATTTAGTCCAATCCCAATCTCATGGAATCGGCCTCCA
TGATTCGGAAGCCGGAAGCCCCAGCGAGGAATTGGCTTGAACTGCCCGCAGACGTAATCTTTATGATTCTGCAGAAGCTAGGCGCTATTGAAATACTTACCACGGCTCAA
AATGTCTGCTTTTTGTGGTATAAGATCTGCAAGGATCCTCTTTTGTGGTGTGTCATCGATATGCACAACTCTGGTGATTTGAATAGTTTTGATCATTTGGAGATTATGTG
TAAACACGCTGTCAAACGTACTTGTGGTTAGTTGGTTGACATCAACATTGAGCATTTTGGCTCCGATGAGTTGCTCCTATACATCGCTAACAGTTCAAAGCAACTTAGAA
GACTT
Protein sequenceShow/hide protein sequence
MESASMIRKPEAPARNWLELPADVIFMILQKLGAIEILTTAQNVCFLWYKICKDPLLWCVIDMHNSGDLNSFDHLEIMCKHAVKRTCG