; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0208231 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0208231
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionhigh mobility group B protein 14
Genome locationCMiso1.1chr08:1114888..1118750
RNA-Seq ExpressionCmc08g0208231
SyntenyCmc08g0208231
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR009071 - High mobility group box domain
IPR036910 - High mobility group box domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581419.1 High mobility group B protein 14, partial [Cucurbita argyrosperma subsp. sororia]4.1e-2393.33Show/hide
Query:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID
        MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAM EYKKR ESG+ QESEEDWEID
Subjt:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID

XP_004134634.1 high mobility group B protein 14 [Cucumis sativus]8.3e-2495.08Show/hide
Query:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG
        MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKR ESGI QESEEDW IDG
Subjt:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG

XP_008439650.1 PREDICTED: high mobility group B protein 14 [Cucumis melo]3.0e-26100Show/hide
Query:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG
        MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG
Subjt:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG

XP_022146670.1 high mobility group B protein 14 isoform X1 [Momordica charantia]1.4e-2393.44Show/hide
Query:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG
        MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAM EYKKR ESGI +ESEEDWEIDG
Subjt:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG

XP_022926030.1 high mobility group B protein 14 [Cucurbita moschata]4.1e-2393.33Show/hide
Query:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID
        MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAM EYKKR ESG+ QESEEDWEID
Subjt:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID

TrEMBL top hitse value%identityAlignment
A0A0A0KKL8 HMG box domain-containing protein4.0e-2495.08Show/hide
Query:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG
        MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKR ESGI QESEEDW IDG
Subjt:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG

A0A1S3AZW3 high mobility group B protein 141.5e-26100Show/hide
Query:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG
        MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG
Subjt:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG

A0A6J1CXW3 high mobility group B protein 14 isoform X16.8e-2493.44Show/hide
Query:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG
        MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAM EYKKR ESGI +ESEEDWEIDG
Subjt:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG

A0A6J1EJV4 high mobility group B protein 142.0e-2393.33Show/hide
Query:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID
        MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAM EYKKR ESG+ QESEEDWEID
Subjt:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID

A0A6J1IKU3 high mobility group B protein 148.4e-2288.33Show/hide
Query:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID
        MRDVGKACG+KWKTMTYEEKVQYYDIA EKRAEFDKAM EYKKR ESG+ +ESEEDWEID
Subjt:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID

SwissProt top hitse value%identityAlignment
O49595 High mobility group B protein 11.2e-0440.35Show/hide
Query:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID
        VGKA G+KWK+M+  EK  Y + A +++AE++K M  Y K  E G  +  +   EI+
Subjt:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID

O49596 High mobility group B protein 25.8e-0437.74Show/hide
Query:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEED
        VGKA G+KWK+++  EK  Y   A +++ E++K +  Y K+ E G  ++ E D
Subjt:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEED

O64702 High mobility group B protein 144.9e-1978.57Show/hide
Query:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEED
        MR++GK CGEKWKTMTYEEKV+YYDIATEKR EF +AMTEY KR ESG H ESE D
Subjt:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEED

P40620 HMG1/2-like protein1.2e-0440.38Show/hide
Query:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEE
        VGKACGE+WK+++ EEK  Y D A +K+ E++  +  Y K+ E    +E  +
Subjt:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEE

P93047 High mobility group B protein 32.0e-0441.51Show/hide
Query:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEED
        VGKA GEKWK+++  EK  Y   A +++ E++K M  Y K+ E G  ++ E D
Subjt:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEED

Arabidopsis top hitse value%identityAlignment
AT2G34450.1 HMG-box (high mobility group) DNA-binding family protein3.5e-2078.57Show/hide
Query:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEED
        MR++GK CGEKWKTMTYEEKV+YYDIATEKR EF +AMTEY KR ESG H ESE D
Subjt:  MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEED

AT2G34450.2 HMG-box (high mobility group) DNA-binding family protein6.6e-1978.95Show/hide
Query:  MRDV-GKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEED
        MR+V GK CGEKWKTMTYEEKV+YYDIATEKR EF +AMTEY KR ESG H ESE D
Subjt:  MRDV-GKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEED

AT3G51880.1 high mobility group B18.3e-0640.35Show/hide
Query:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID
        VGKA G+KWK+M+  EK  Y + A +++AE++K M  Y K  E G  +  +   EI+
Subjt:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID

AT3G51880.2 high mobility group B18.3e-0640.35Show/hide
Query:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID
        VGKA G+KWK+M+  EK  Y + A +++AE++K M  Y K  E G  +  +   EI+
Subjt:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID

AT3G51880.3 high mobility group B18.3e-0640.35Show/hide
Query:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID
        VGKA G+KWK+M+  EK  Y + A +++AE++K M  Y K  E G  +  +   EI+
Subjt:  VGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTGATGTTGGCAAGGCATGTGGGGAGAAATGGAAAACAATGACATATGAGGAAAAAGTACAATATTATGATATTGCTACAGAGAAACGTGCAGAGTTTGACAAAGC
CATGACAGAATATAAGAAGAGGACGGAAAGTGGAATACACCAAGAATCTGAGGAAGATTGGGAGATTGATGGATAG
mRNA sequenceShow/hide mRNA sequence
GATTTCCGCAAGGAATTTCAAGAACAGAATCCAGATGTCAAGACGATGCGTGATGTTGGCAAGGCATGTGGGGAGAAATGGAAAACAATGACATATGAGGAAAAAGTACA
ATATTATGATATTGCTACAGAGAAACGTGCAGAGTTTGACAAAGCCATGACAGAATATAAGAAGAGGACGGAAAGTGGAATACACCAAGAATCTGAGGAAGATTGGGAGA
TTGATGGATAGAGCTGTGTGGCTGTTGTTCGTTATAGCTAGGATTCTGTAGGAAGAGATTGTTCAAGGACAACAATTCCCCCTTCTCTCTTAGTTGTTTAATTTATATTC
TGTATAAATTTCTCCAGTAAATGGTTTTTTTTTTTTTAAGTTAATGATAATTAGTTAGAACTTAAATTAAATCAGGAACTTCAAAGAGTTCAATTCAATGTTTATTTAGA
AGTTAGAACTCGCTTCTTTTGTTAACCAGATGTTCTGAAGACTATGGCTCCGAGTGGGATGAGGTTTGTCGGAGTAAAAAAATTATTGTGGGAGAATCTTACCGTCTACG
TTGTTTGTAAATTTGATTGTACATTAGCTTATATAAAATCACTTATCTTGATTTTAAATCCTACTTTCCTAGAAATTTCAAATCCGTTCTTTCATGTCTTTTCTTTTTAT
TGCTCATTCTCTATTCAATTCCTAGCCACCTTTTATTCTCTGGTTTAATTTTGATCAAATATTTTTAAATGAAATTATTTTCGATTTAAAGCGCTAAAAAAACAATTATC
TTGTATTGTATTTAATGTTAAATATCCGATGAAAAGATTAATGTTACATATAAATACGAAAATAGATGAAATGCCTAATTAAACACGACAGTTTAGCATTAATACTTGTA
TAAAAAACGATAATTTAGTGTTAATTTACCAAATAAGTAAGTTTAAAAAAGGAAAATTATTGTGAACCCGGCGTGAATCGAACACGCAACCTTCTGATCTGGAGTCAGAC
GCGCTACCATTGCGCCACGGATCCATGTTTGTTTGCATCTTTCTTAATTTTGTAAATGTTCTAGTATTATAATTTGTATGATGCCTTTCCCAAAATGCAACTGATTATTT
CAGAAGCGCAATTCCAACCTAAGCCTATGTCGATTGTATTCTGAGTTCAAATAATAGATATCTAAATAGTTTATATGCGCACCGCTACGAATTTAATCTGGCTAGAGGGT
TTCCTCTTTCGGTAGTATTTTTGTGTATTTTTTTTTGCTTTTCGATAAGAATCTTGCAGCATGGTTGAATTTACAGCTTTGGAATAGCATCTTGCTTCTGTACAGTAAAA
TCCTTACTGCTCTGGAAAATAGCATAATCTTTTAAACATGTGATGTGGTCCAATTGATCAAGAGTGTTTCTCAATAGGAATCGTTCTTTTGGAGTCTTAACAAAAAAGCA
TGTTATGGGGAAAGCCAAATGAAGGGATCTCATTTAAGGCAAATGTTTCCTACCGTGCGCTGGCAAAGGCAAGCTAATATTCGCATATGCACAAGAGAACCATAAATCTA
CAAATTCAAAAACGCGCTATTGGGTCTGCTTAGCTGGGCAGCTGATGGTGTTAAAGAATCAGCAATGCTCCTAACCTCTGCAATCATCGCTACGACATCATTGAGCTTGT
TAACTGCTGATCCCACGCCCTGCATTAGATAGACATCAACATCATTTCACTCTATTATACTCATAACAGAAACATTAACTCATAAACCCAGAATTCCAATCTGAGCAGAT
TATGTGGGGAGAGAGATCAGGAAGGAGTGGCATACCACGCCTGCAGCTCCAGCTGTGATAGCCATTGGTGCAGTGACAGCACTTAATCCAGACGAACACATAACGGGAAT
CTTAACAGCCCTTGAGATTGAATACGCAGCTGCTAGTGTAGGCGCTGCCTGTTATTATCAAATTCAAATAGGCCCTGCGAGATAAATATTGTAGAATTCTGACCAGTAGA
TTCTACATCCTACCTTCTCGATCAAGCCGAGGATGCCAGATTTTGAAGGATGAGAACATTTTCCTCCTTCAGTTTGTATAACATCGACACCTTCCTGTTCCAGCAACTCT
GCCAGCTTGACCTGTTAATATCTCAAAGTTTCAGTTAGCACAACAACAACGAGAATGGAATAAAAAAATCCTTAACTTGCATTAATAAGCCCCTGCTTTAACCTGATCAA
GAAGTCCAAGTGTGTGGGGCACGGTGACGGACAAGGCCACAGATGGCAGTAACCTCCTAGTCTCTTTTGTTAGATTTAATATCTACATCAAAGAAACATCATTCAAAAAT
TAGAACGAATGCATCAAGAAGTTGTATTCGCGAAAGATTGATTGAATTATTATACTCCGTTTGAGCATTTAGCCTCTTGGTCATTTGCTCATATTATTCGAGTTTTTAGT
ACTTGGAAATT
Protein sequenceShow/hide protein sequence
MRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRTESGIHQESEEDWEIDG