; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0210331 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0210331
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionVID27-like protein
Genome locationCMiso1.1chr08:2173507..2174867
RNA-Seq ExpressionCmc08g0210331
SyntenyCmc08g0210331
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052722.1 VID27-like protein [Cucumis melo var. makuwa]3.8e-38100Show/hide
Query:  MRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV
        MRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV
Subjt:  MRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV

TYK13103.1 VID27-like protein [Cucumis melo var. makuwa]7.9e-3697.62Show/hide
Query:  MRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV
        MRSNPMERYPSLSLYYPETDSDSSSAAA DEMENVCFMWDDEDRD ELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV
Subjt:  MRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV

XP_008441085.2 PREDICTED: VID27-like protein, partial [Cucumis melo]2.3e-112100Show/hide
Query:  SSSSSSSSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQREHQPITITNPQSIKLTQPPEHWSGSPISSCFEESF
        SSSSSSSSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQREHQPITITNPQSIKLTQPPEHWSGSPISSCFEESF
Subjt:  SSSSSSSSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQREHQPITITNPQSIKLTQPPEHWSGSPISSCFEESF

Query:  VQWNVRAPLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELI
        VQWNVRAPLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELI
Subjt:  VQWNVRAPLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELI

Query:  EIALDKKRVSSECFQLEEENLIEINISPTAFPTFV
        EIALDKKRVSSECFQLEEENLIEINISPTAFPTFV
Subjt:  EIALDKKRVSSECFQLEEENLIEINISPTAFPTFV

XP_011658193.1 uncharacterized protein LOC105435960 [Cucumis sativus]1.1e-8585.04Show/hide
Query:  SSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGAT----QREHQPITITNPQSIKLTQPPEHWSG-SPISSCFEESFV
        SSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSP+L+LAGFLFLSLLRLGAT    QR+HQPITITNPQ IK TQPPEH +G SPISSCFEESFV
Subjt:  SSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGAT----QREHQPITITNPQSIKLTQPPEHWSG-SPISSCFEESFV

Query:  QWNVRAPLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIE
        QWNVRAPLEVIYE YEEE+EEEEEEEE+EE E E  E +D  KDDGTV+HMR N MERYPSLSLYYPETDSDS S  A DEMENVCFMWDDEDRD ELIE
Subjt:  QWNVRAPLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIE

Query:  IALDKKRVSSECFQLEEENLIEINISPTAFPTFV
        IALDKKRVSSE FQLEEENLIEI+ISPTAFP F+
Subjt:  IALDKKRVSSECFQLEEENLIEINISPTAFPTFV

XP_038883304.1 uncharacterized protein LOC120074292 [Benincasa hispida]2.4e-4560.17Show/hide
Query:  SLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQRE-HQPITITNPQSIKLTQPPEHWSGSPISSCFEESFVQWNVRAPL
        S S  SHPLFS LLSF  LILL+FP FLWTSLLSP +LLAG LFLSLLRLGATQ +  Q  +  +PQ       P   S S  S+ FE+SFVQWNVRAPL
Subjt:  SLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQRE-HQPITITNPQSIKLTQPPEHWSGSPISSCFEESFVQWNVRAPL

Query:  EVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRD-EELIEIALD--K
        EVIYE YEEEEEEEE ++ +++ E                   R+  ++ YPSLSLYYPETDSDSSS    DEMENVCFMWD+ED D +ELIEI LD  K
Subjt:  EVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRD-EELIEIALD--K

Query:  KRVSSECFQL--EEENLIEINISPTAFPTFV
        K+  SE FQL  EE+NLIEI+ISPTAFP F+
Subjt:  KRVSSECFQL--EEENLIEINISPTAFPTFV

TrEMBL top hitse value%identityAlignment
A0A0A0KLD5 Uncharacterized protein5.3e-8685.04Show/hide
Query:  SSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGAT----QREHQPITITNPQSIKLTQPPEHWSG-SPISSCFEESFV
        SSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSP+L+LAGFLFLSLLRLGAT    QR+HQPITITNPQ IK TQPPEH +G SPISSCFEESFV
Subjt:  SSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGAT----QREHQPITITNPQSIKLTQPPEHWSG-SPISSCFEESFV

Query:  QWNVRAPLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIE
        QWNVRAPLEVIYE YEEE+EEEEEEEE+EE E E  E +D  KDDGTV+HMR N MERYPSLSLYYPETDSDS S  A DEMENVCFMWDDEDRD ELIE
Subjt:  QWNVRAPLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIE

Query:  IALDKKRVSSECFQLEEENLIEINISPTAFPTFV
        IALDKKRVSSE FQLEEENLIEI+ISPTAFP F+
Subjt:  IALDKKRVSSECFQLEEENLIEINISPTAFPTFV

A0A1S3B395 VID27-like protein1.1e-112100Show/hide
Query:  SSSSSSSSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQREHQPITITNPQSIKLTQPPEHWSGSPISSCFEESF
        SSSSSSSSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQREHQPITITNPQSIKLTQPPEHWSGSPISSCFEESF
Subjt:  SSSSSSSSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQREHQPITITNPQSIKLTQPPEHWSGSPISSCFEESF

Query:  VQWNVRAPLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELI
        VQWNVRAPLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELI
Subjt:  VQWNVRAPLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELI

Query:  EIALDKKRVSSECFQLEEENLIEINISPTAFPTFV
        EIALDKKRVSSECFQLEEENLIEINISPTAFPTFV
Subjt:  EIALDKKRVSSECFQLEEENLIEINISPTAFPTFV

A0A5A7UAD7 VID27-like protein1.8e-38100Show/hide
Query:  MRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV
        MRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV
Subjt:  MRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV

A0A5D3CMF2 VID27-like protein3.8e-3697.62Show/hide
Query:  MRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV
        MRSNPMERYPSLSLYYPETDSDSSSAAA DEMENVCFMWDDEDRD ELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV
Subjt:  MRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIEIALDKKRVSSECFQLEEENLIEINISPTAFPTFV

A0A6J1CME6 uncharacterized protein LOC1110124588.8e-3348.47Show/hide
Query:  SSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQREHQPITITNPQSIKL------TQPPEH-------------W
        S   ++S FS PLFS LL+FF LILL FP   W  L SP  LL G L LSLLRLGATQR  + I   N    ++        PPE               
Subjt:  SSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQREHQPITITNPQSIKL------TQPPEH-------------W

Query:  SGSPI-----SSCFEESFVQWNVRAPLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSS------
         G  I      +CFEESFVQWNVRAPLEVIYE YE E++++   E +   E E              V +R   +ERYPSLSLYYPETDSDSSS      
Subjt:  SGSPI-----SSCFEESFVQWNVRAPLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSS------

Query:  AAAADEMENVCFMWDDEDRDEELIEIALD----KKRVSSECFQLEEENLIEINISPTAFPTF
          A D ++++CFMWDD +  +ELIEIALD    K + SSE FQLEEENLIEI+ISPT    F
Subjt:  AAAADEMENVCFMWDDEDRDEELIEIALD----KKRVSSECFQLEEENLIEINISPTAFPTF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G05018.1 unknown protein1.8e-0634.78Show/hide
Query:  FSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQREHQPITITNPQSIKLTQPPEHWSGSPISSCFEESFVQWNVR--APLEVI
        FSHPLFS  +S +T+ LL+FP      L+S   LL G   +S L LG+T++     +I  P S + +  PE  +G  ++      F++WN +  APLEVI
Subjt:  FSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQREHQPITITNPQSIKLTQPPEHWSGSPISSCFEESFVQWNVR--APLEVI

Query:  YEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSD
        +              +EEEE+   G     VKD    V ++     R+PSLS++ PE+DS+
Subjt:  YEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSD

AT4G21500.1 unknown protein4.8e-2339Show/hide
Query:  FSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQREHQPITITNPQSIKLTQPPEHWSGSPISSCF--EES-----FVQWNVRA
        FSHPLFS  ++ ++LIL++FP  L    LSP LL++G L LSLLRLG+T+  +             TQP + +  S     F   ES     FV+WN+RA
Subjt:  FSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQREHQPITITNPQSIKLTQPPEHWSGSPISSCF--EES-----FVQWNVRA

Query:  PLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAAD----------EMENVCFMWDDEDRD-
        PLEVI+E YE+EEEEEEEE+                         R   MER+PSLSL YPE+DS+S SA++++            EN+ F W++++   
Subjt:  PLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAAD----------EMENVCFMWDDEDRD-

Query:  --EELIEIALD----KKRVSSEC---FQLEEENLIEINISP
          E LIEI LD     +++ S+    F  EE+ LIEI++ P
Subjt:  --EELIEIALD----KKRVSSEC---FQLEEENLIEINISP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACTGTCAATTTTCTCTCATCCTCT
GTTTTCAGCTCTTCTCTCTTTCTTCACTCTCATTCTCCTCTTCTTCCCTCCTTTTCTCTGGACTTCCCTCCTCTCTCCGTCGCTTCTCCTCGCCGGATTTCTCTTTCTCT
CCCTCCTCCGCCTCGGTGCAACTCAACGCGAACACCAACCCATCACCATCACCAACCCCCAATCCATCAAACTTACTCAACCACCAGAACACTGGAGTGGTTCTCCCATT
TCTTCCTGCTTCGAGGAATCTTTCGTACAATGGAATGTCAGAGCGCCGTTGGAGGTCATTTACGAAGTCTACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGA
AGAAGAAGAAGAAGAAGAAGAAGGAGAAGGTGAGGATCAGGTTAAGGATGATGGGACGGTAGTACACATGAGATCAAATCCAATGGAGAGGTATCCTTCTCTGTCGCTAT
ATTATCCGGAAACGGACTCCGATAGCTCGTCGGCGGCGGCGGCAGATGAGATGGAGAATGTGTGTTTTATGTGGGATGATGAAGATAGGGATGAAGAACTCATCGAGATA
GCTTTGGATAAGAAGAGAGTATCATCGGAGTGTTTTCAGTTGGAGGAGGAGAATTTGATCGAGATTAATATCTCTCCAACCGCTTTCCCAACGTTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
TGACAAATGGCGGACCACATCCACATTCTCATTCACATTCCCTACATCGCAAATTGCAAAGTGCATTGGCTTCATAAACCCTAAATAATCATACATTTAGTTCATTCTTC
TTTTTCTTCTTCTCATCTCCAATTTTCCACAAATGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TCTTCTTCACTGTCAATTTTCTCTCATCCTCTGTTTTCAGCTCTTCTCTCTTTCTTCACTCTCATTCTCCTCTTCTTCCCTCCTTTTCTCTGGACTTCCCTCCTCTCTCC
GTCGCTTCTCCTCGCCGGATTTCTCTTTCTCTCCCTCCTCCGCCTCGGTGCAACTCAACGCGAACACCAACCCATCACCATCACCAACCCCCAATCCATCAAACTTACTC
AACCACCAGAACACTGGAGTGGTTCTCCCATTTCTTCCTGCTTCGAGGAATCTTTCGTACAATGGAATGTCAGAGCGCCGTTGGAGGTCATTTACGAAGTCTACGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGTGAGGATCAGGTTAAGGATGATGGGACGGTAGTACACATGAGATCAAA
TCCAATGGAGAGGTATCCTTCTCTGTCGCTATATTATCCGGAAACGGACTCCGATAGCTCGTCGGCGGCGGCGGCAGATGAGATGGAGAATGTGTGTTTTATGTGGGATG
ATGAAGATAGGGATGAAGAACTCATCGAGATAGCTTTGGATAAGAAGAGAGTATCATCGGAGTGTTTTCAGTTGGAGGAGGAGAATTTGATCGAGATTAATATCTCTCCA
ACCGCTTTCCCAACGTTTGTTTAAATATATATAACAAAGGTTTTGTTTTTCTCATTTTCCATCAATTCATCTGCATCATATCCATTCCCTATTCAATTTGTTTTTCCAAT
TTGGATACTAAAGAAATTGTTTCTATACATAAATATGAATTTCCGGGCTGCATATGAGTTGGGCCAGCCCATCCAGGAGCGCATCCAACTACACCACGATACCAATTGAA
CCTTAATGATAAAATTATTTAATATCTTATAATCTTCATTTTATTACGCTGATAAACATAAATTTAGAGGTCGAAGTTCGACCACTAATCCCTACGATTGTTAGTAAAAT
TTTGTTACTTAACATAAAATTTTTTCATACTTCCTTCCCGACAGCCATAATAATTTAAATTTAATAAAGTATAATAATGGATTTGAGGGTGAGGGTGAGGGTAACAGTAA
GGATTAAGATAAGAATTAAATGAAGAAGTGAAGTGTGGAGT
Protein sequenceShow/hide protein sequence
MSSSSSSSSSSSSSSSSSSSSSSSSSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPSLLLAGFLFLSLLRLGATQREHQPITITNPQSIKLTQPPEHWSGSPI
SSCFEESFVQWNVRAPLEVIYEVYEEEEEEEEEEEEEEEEEEEEGEGEDQVKDDGTVVHMRSNPMERYPSLSLYYPETDSDSSSAAAADEMENVCFMWDDEDRDEELIEI
ALDKKRVSSECFQLEEENLIEINISPTAFPTFV