; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0212871 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0212871
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptioneukaryotic initiation factor 4A-I isoform X1
Genome locationCMiso1.1chr08:3603555..3606791
RNA-Seq ExpressionCmc08g0212871
SyntenyCmc08g0212871
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12893.1 ATP-dependent RNA helicase FAL1 isoform X2 [Cucumis melo var. makuwa]3.8e-108100Show/hide
Query:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
Subjt:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
        TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
Subjt:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI

Query:  AEMPIN
        AEMPIN
Subjt:  AEMPIN

XP_004141918.1 eukaryotic initiation factor 4A-I isoform X3 [Cucumis sativus]1.4e-10797.16Show/hide
Query:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDP EAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELDSVCSAVSNL YISLASLYSDLAEADR+LILEKFRQ
Subjt:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
        TTSRWSQKFSSLSEEKCE EKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

XP_008440274.1 PREDICTED: eukaryotic initiation factor 4A-I isoform X1 [Cucumis melo]1.2e-10999.53Show/hide
Query:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
Subjt:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
        TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
Subjt:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

XP_008440275.1 PREDICTED: ATP-dependent RNA helicase FAL1 isoform X2 [Cucumis melo]1.9e-10799.51Show/hide
Query:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
Subjt:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
        TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
Subjt:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI

Query:  AEMPIN
        AEMPIN
Subjt:  AEMPIN

XP_031742372.1 ATP-dependent RNA helicase eIF4A isoform X1 [Cucumis sativus]1.3e-10596.62Show/hide
Query:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDP EAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELDSVCSAVSNL YISLASLYSDLAEADR+LILEKFRQ
Subjt:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
        TTSRWSQKFSSLSEEKCE EKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI

Query:  AEMPINI
        AEMPIN+
Subjt:  AEMPINI

TrEMBL top hitse value%identityAlignment
A0A0A0KFR9 Uncharacterized protein7.0e-10897.16Show/hide
Query:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDP EAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELDSVCSAVSNL YISLASLYSDLAEADR+LILEKFRQ
Subjt:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
        TTSRWSQKFSSLSEEKCE EKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

A0A1S3B0P7 eukaryotic initiation factor 4A-I isoform X15.7e-11099.53Show/hide
Query:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
Subjt:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
        TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
Subjt:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

A0A1S3B1C4 ATP-dependent RNA helicase FAL1 isoform X29.1e-10899.51Show/hide
Query:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
Subjt:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
        TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
Subjt:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI

Query:  AEMPIN
        AEMPIN
Subjt:  AEMPIN

A0A5D3CLW0 ATP-dependent RNA helicase FAL1 isoform X21.8e-108100Show/hide
Query:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
Subjt:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
        TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
Subjt:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI

Query:  AEMPIN
        AEMPIN
Subjt:  AEMPIN

A0A6J1HF44 eukaryotic initiation factor 4A-I isoform X23.9e-10393.84Show/hide
Query:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAID IEAFSPPSH SSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELD+VCSAVSNLQYISLASLYSDLAEADRALILE FRQ
Subjt:  MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI
        TTSRWSQK +SLS++KCE E+ GEKSHMIVVTDACLPLLASGESPLSAHVLINYE+PTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWSQKFSSLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVI

Query:  AEMPINISEIL
        AEMPINISEIL
Subjt:  AEMPINISEIL

SwissProt top hitse value%identityAlignment
A1D7N3 ATP-dependent RNA helicase eIF4A3.8e-1023.04Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV
        + FY+AV++ ++K++TL  L +          ++ C++R ++D +   ++   + ++++++ D+ +A R +I+++FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL
             +++ TD    LLA G       ++INY++P  +E Y+ R+         G+ IN V   +V  ++ IE+     I EMP+N+++++
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL

A4QVP2 ATP-dependent RNA helicase eIF4A2.2e-1023.56Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV
        + FY+AV++ ++K++TL  L +          ++ C++R ++D +   ++   + ++++++ D+ +A R LI+++FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL
             +++ TD    LLA G       ++INY++P  +E Y+ R+         G+ IN V   +V  ++ IE+     I EMP+N+++++
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL

O02494 Eukaryotic initiation factor 4A6.2e-1327.23Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV
        R FYV V++ ++KM+TL+ L +       +  I+ C++R  +D +   +    + + +S++ D+ + DR +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL
             +++ TD    LLA G       ++INY++P   ETY+ R+         G+ IN V   ++V L+ IE +    I EMP+ I++IL
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL

Q4P331 ATP-dependent RNA helicase eIF4A4.5e-1124.08Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV
        + FYVAV++  +K++TL  L +          ++ C++R ++D +   +++ ++ ++++++ D+ +A R +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL
             +++ TD    LLA G       ++INY++P+ +E Y+ R+         G+ IN V   +V  L+ IE+     I EMP+N+++++
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL

Q7RV88 ATP-dependent RNA helicase eIF4A2.2e-1023.56Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV
        + FY+AV++ ++K++TL  L +          ++ C++R ++D +   ++   + ++++++ D+ +A R LI+++FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL
             +++ TD    LLA G       ++INY++P  +E Y+ R+         G+ IN V   +V  ++ IE+     I EMP+N+++++
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL

Arabidopsis top hitse value%identityAlignment
AT1G72730.1 DEA(D/H)-box RNA helicase family protein2.8e-0821.99Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV
        + FYV VD+ ++K+ETL  L +      S   ++  ++R ++D +   + +  + ++++ + D+ +  R +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL
             +++ TD    LLA G       ++IN+++PT+ E Y+ R+         G+ IN +   +   +  I+    +V+ E+P N++++L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL

AT3G13920.1 eukaryotic translation initiation factor 4A13.6e-0822.51Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV
        + FYV V++ ++K+ETL  L +      S   ++  ++R ++D +   + +  + ++++ + D+ +  R +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL
             +++ TD    LLA G       ++IN+++PT+ E Y+ R+         G+ IN V   +   L  I++   +V+ E+P N++++L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL

AT3G19760.1 eukaryotic initiation factor 4A-III1.9e-0921.99Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV
        + F+VAV++ ++K +TL  L D          ++ C+++ ++D +   + +  + +++S++ D+ + +R  I+ +FR   SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFSSLSEEKCEGEKV

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL
             +++ TD    + A G       ++INY++P  +E Y+ R+         G+ IN V   ++  L+ IE+     I EMP+N+++++
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL

AT4G37020.1 BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1)2.9e-7467.45Show/hide
Query:  IDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTT
        +D +EA S P  S S  SQQ HFY+AVDR QFKMET+V LL V GRRP LP++VCCSSRDELD+VCS++S L YISLA+LYSDLA+ +RA+++EKFRQ T
Subjt:  IDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTT

Query:  SRWSQKFSSLSEEKCEGEKVGEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLV
          W+Q+ +S+ EE  E  + G++   SH++VVTD CLPLL+SGES LSA VLINYE+PTKKETY RR+TTC AS GI+INMVVGGEV TLKS+EE+SG++
Subjt:  SRWSQKFSSLSEEKCEGEKVGEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLV

Query:  IAEMPINISEIL
        IAEMPINISEIL
Subjt:  IAEMPINISEIL

AT4G37020.2 FUNCTIONS IN: molecular_function unknown2.7e-7266.35Show/hide
Query:  IDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTT
        +D +EA S P  S S  SQQ HFY+AVDR QFKMET+V LL V GRRP LP++VCCSSRDELD+VCS++S L YISLA+LYSDLA+ +RA+++EKFRQ T
Subjt:  IDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTT

Query:  SRWSQKFSSLSEEKCEGEKVGEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLV
          W+Q+ +S+ EE  E  + G++   SH++VVTD CLPLL+SGES LSA VLINYE+PTKKETY RR+TTC AS GI+INMVVGGEV TLKS+EE+SG++
Subjt:  SRWSQKFSSLSEEKCEGEKVGEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLV

Query:  IAEMPINI
        IAEMPIN+
Subjt:  IAEMPINI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATCGATCCAATTGAAGCATTCTCGCCTCCCTCTCACTCATCTTCCCATTTCAGTCAACAGCGCCACTTCTATGTTGCCGTTGATAGGCTCCAGTTTAAGATGGA
AACCTTAGTGGGCTTGTTGGACGTGGCCGGTCGCCGTCCGTCGTTGCCGATGATTGTGTGTTGTAGTTCTCGTGACGAACTCGATTCTGTCTGCTCCGCCGTCTCCAACC
TCCAATACATCTCATTGGCCTCTTTGTACAGTGACCTTGCCGAAGCAGACCGTGCACTGATTTTAGAGAAATTTCGGCAAACAACATCAAGGTGGAGCCAAAAGTTCAGT
TCTCTATCAGAAGAAAAATGTGAGGGTGAGAAAGTTGGAGAAAAATCTCACATGATTGTAGTAACAGACGCCTGCCTTCCACTTCTTGCTTCTGGGGAGTCGCCTCTTTC
TGCCCATGTTTTGATAAATTATGAGATACCAACAAAGAAGGAAACATATATGAGGCGCATGACTACCTGCTCGGCCTCAGATGGGATCTTGATCAACATGGTTGTTGGAG
GAGAAGTGGTAACTCTCAAAAGCATTGAAGAAAATAGTGGCCTTGTTATTGCTGAGATGCCCATTAATATTTCTGAAATTTTGTAA
mRNA sequenceShow/hide mRNA sequence
GACTCGTCATACTCATAAGTCATAATATCTCAAACTTGGAAGCAAACGGACAAGGGCGCTGTGCTGTAGCGCAGCGACCATGGCAATCGATCCAATTGAAGCATTCTCGC
CTCCCTCTCACTCATCTTCCCATTTCAGTCAACAGCGCCACTTCTATGTTGCCGTTGATAGGCTCCAGTTTAAGATGGAAACCTTAGTGGGCTTGTTGGACGTGGCCGGT
CGCCGTCCGTCGTTGCCGATGATTGTGTGTTGTAGTTCTCGTGACGAACTCGATTCTGTCTGCTCCGCCGTCTCCAACCTCCAATACATCTCATTGGCCTCTTTGTACAG
TGACCTTGCCGAAGCAGACCGTGCACTGATTTTAGAGAAATTTCGGCAAACAACATCAAGGTGGAGCCAAAAGTTCAGTTCTCTATCAGAAGAAAAATGTGAGGGTGAGA
AAGTTGGAGAAAAATCTCACATGATTGTAGTAACAGACGCCTGCCTTCCACTTCTTGCTTCTGGGGAGTCGCCTCTTTCTGCCCATGTTTTGATAAATTATGAGATACCA
ACAAAGAAGGAAACATATATGAGGCGCATGACTACCTGCTCGGCCTCAGATGGGATCTTGATCAACATGGTTGTTGGAGGAGAAGTGGTAACTCTCAAAAGCATTGAAGA
AAATAGTGGCCTTGTTATTGCTGAGATGCCCATTAATATTTCTGAAATTTTGTAAGGATGTCGGCTACAGTGGAACATCTAAGGACAACACAGAAGGTTTGATTAGAAGG
TGTTTTACCCCTACCAACTGATCATTGTCAATGATAACTTATGTTGGTTGATCTGTACTTGAGAGAATTTTCCAGTCTATTGAACAGGGGGCTATTTATTGAGAGAATGG
AATGCTGAGATAATTTGGTGTTCAAATTTGGTTTATTTTTCTTTTCTAATATAGAAATTCAAGTTGGTAACCCTTTTT
Protein sequenceShow/hide protein sequence
MAIDPIEAFSPPSHSSSHFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDSVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWSQKFS
SLSEEKCEGEKVGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEENSGLVIAEMPINISEIL