; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0214441 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0214441
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationCMiso1.1chr08:4581576..4585751
RNA-Seq ExpressionCmc08g0214441
SyntenyCmc08g0214441
Gene Ontology termsGO:0051568 - histone H3-K4 methylation (biological process)
GO:0016020 - membrane (cellular component)
GO:0048188 - Set1C/COMPASS complex (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
GO:0042393 - histone binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR019775 - WD40 repeat, conserved site
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143426.1 COMPASS-like H3K4 histone methylase component WDR5A [Cucumis sativus]1.1e-4998Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE
        LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYI SGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKG EE
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE

XP_008440490.1 PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Cucumis melo]1.0e-5099Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE
        LRLWNFSTGKFLKTYTGHTNSKFCI+STFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE

XP_022133170.1 COMPASS-like H3K4 histone methylase component WDR5A [Momordica charantia]7.6e-4695.79Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQ
        LRLWNFSTGKFLKTYTGH NSKFCISSTFSVTNG+YIVSGSEDNCVYLWELQTRQIVQKLEGHSD VISVSCHPSENMIASGA+GNDKTVKIWTQ
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQ

XP_022950714.1 COMPASS-like H3K4 histone methylase component WDR5A [Cucurbita moschata]4.5e-4693.75Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK
        LRLWNFSTGKFLKTYTGH NSKFCI+STFSVTNG+YIVSGSEDNCVYLWELQTR+IVQKLEGHSDTVISVSCHPSEN+IASGA+GNDKTVKIWTQK
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK

XP_038883363.1 COMPASS-like H3K4 histone methylase component WDR5A [Benincasa hispida]1.1e-4797.92Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK
        LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNG+YIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGA+GNDKTVKIWTQK
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK

TrEMBL top hitse value%identityAlignment
A0A0A0KGK9 WD_REPEATS_REGION domain-containing protein5.5e-5098Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE
        LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYI SGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKG EE
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE

A0A1S3B1Z0 COMPASS-like H3K4 histone methylase component WDR5A5.0e-5199Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE
        LRLWNFSTGKFLKTYTGHTNSKFCI+STFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE

A0A5A7SYL9 COMPASS-like H3K4 histone methylase component WDR5A5.0e-5199Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE
        LRLWNFSTGKFLKTYTGHTNSKFCI+STFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE

A0A6J1GGN2 COMPASS-like H3K4 histone methylase component WDR5A2.2e-4693.75Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK
        LRLWNFSTGKFLKTYTGH NSKFCI+STFSVTNG+YIVSGSEDNCVYLWELQTR+IVQKLEGHSDTVISVSCHPSEN+IASGA+GNDKTVKIWTQK
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK

A0A6J1ILQ0 COMPASS-like H3K4 histone methylase component WDR5A2.2e-4693.75Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK
        LRLWNFSTGKFLKTYTGH NSKFCI+STFSVTNG+YIVSGSEDNCVYLWELQTR+IVQKLEGHSDTVISVSCHPSEN+IASGA+GNDKTVKIWTQK
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK

SwissProt top hitse value%identityAlignment
P61964 WD repeat-containing protein 55.3e-3466.67Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIW
        L+LW++S GK LKTYTGH N K+CI + FSVT G++IVSGSEDN VY+W LQT++IVQKL+GH+D VIS +CHP+EN+IAS A+ NDKT+K+W
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIW

P61965 WD repeat-containing protein 55.3e-3466.67Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIW
        L+LW++S GK LKTYTGH N K+CI + FSVT G++IVSGSEDN VY+W LQT++IVQKL+GH+D VIS +CHP+EN+IAS A+ NDKT+K+W
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIW

Q2KIG2 WD repeat-containing protein 55.3e-3466.67Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIW
        L+LW++S GK LKTYTGH N K+CI + FSVT G++IVSGSEDN VY+W LQT++IVQKL+GH+D VIS +CHP+EN+IAS A+ NDKT+K+W
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIW

Q9M2Z2 COMPASS-like H3K4 histone methylase component WDR5A5.7e-3668.75Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK
        LRLWN S+ KFLKTYTGH N+++CISS FSVTNG+ IVSGSEDNCV++WEL +++++QKLEGH++TV++V+CHP+EN+IASG++  DKTV+IWTQK
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK

Q9SY00 COMPASS-like H3K4 histone methylase component WDR5B1.8e-3469.47Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQ
        L+L N++TGKFLK YTGHTN  FCI+S FSVTNG+YIVSGSEDNCVYLW+LQ R I+Q+LEGH+D VISVSCHP +N I+S     DKT++IW Q
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQ

Arabidopsis top hitse value%identityAlignment
AT3G49660.1 Transducin/WD40 repeat-like superfamily protein4.0e-3768.75Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK
        LRLWN S+ KFLKTYTGH N+++CISS FSVTNG+ IVSGSEDNCV++WEL +++++QKLEGH++TV++V+CHP+EN+IASG++  DKTV+IWTQK
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQK

AT4G02730.1 Transducin/WD40 repeat-like superfamily protein1.3e-3569.47Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQ
        L+L N++TGKFLK YTGHTN  FCI+S FSVTNG+YIVSGSEDNCVYLW+LQ R I+Q+LEGH+D VISVSCHP +N I+S     DKT++IW Q
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQ

AT5G08560.1 transducin family protein / WD-40 repeat family protein5.9e-1238.95Show/hide
Query:  LRLWNF-STGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSE-NMIASGAVGNDKTVKIW
        +RLWN     K +  Y GH  S+F I S F      +I SGSED+ VY+W   T +++ +L GH+  V  VS  P+  +M+AS +  +D T++IW
Subjt:  LRLWNF-STGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSE-NMIASGAVGNDKTVKIW

AT5G08560.2 transducin family protein / WD-40 repeat family protein5.9e-1238.95Show/hide
Query:  LRLWNF-STGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSE-NMIASGAVGNDKTVKIW
        +RLWN     K +  Y GH  S+F I S F      +I SGSED+ VY+W   T +++ +L GH+  V  VS  P+  +M+AS +  +D T++IW
Subjt:  LRLWNF-STGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSE-NMIASGAVGNDKTVKIW

AT5G52820.1 WD-40 repeat family protein / notchless protein, putative9.1e-1334.41Show/hide
Query:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIW
        +RLWN  TG+F+  + GH    + +S +    + R ++SGS+D+ + +WE++T+++ Q L GH+D V +V   P    + SG  G D+ +K+W
Subjt:  LRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCTACTGAGATTATGGAACTTCTCTACTGGAAAATTTCTGAAGACTTATACGGGCCATACCAATTCAAAATTCTGCATCTCCTCCACCTTCTCCGTAACAAATGG
GAGGTATATTGTGAGTGGTTCAGAAGACAATTGTGTATACCTATGGGAGCTGCAGACCAGGCAGATAGTTCAAAAACTGGAAGGTCACTCTGATACAGTTATATCAGTAT
CTTGTCATCCCAGCGAGAACATGATTGCTTCTGGAGCTGTGGGAAATGACAAAACTGTGAAGATCTGGACCCAGAAGGGTCCAGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
GGTAAGGGATTTGGGATGCGTCTACTGAGATTATGGAACTTCTCTACTGGAAAATTTCTGAAGACTTATACGGGCCATACCAATTCAAAATTCTGCATCTCCTCCACCTT
CTCCGTAACAAATGGGAGGTATATTGTGAGTGGTTCAGAAGACAATTGTGTATACCTATGGGAGCTGCAGACCAGGCAGATAGTTCAAAAACTGGAAGGTCACTCTGATA
CAGTTATATCAGTATCTTGTCATCCCAGCGAGAACATGATTGCTTCTGGAGCTGTGGGAAATGACAAAACTGTGAAGATCTGGACCCAGAAGGGTCCAGAAGAATGACTA
ATTTATTTGTCAAAGCAATCCACGATCAAGGTTTGAACATATAACTCTGTCGTGGTGGCACAGTTCTTGTAGCTTAGTTTAATTAATTATAAACTGTTGAGAACATAACT
TTTGAAAAGGTTAGCATGTAAGTTTTGTTTCTATTCTCGGCATCTCTGTTATCATCACCCCAACGTCTGCTATCACAGATTTGGTGGCGTTTATGGATGTAAAGTAGTTG
GTTTGCTCCATCCAAGAGTTAGGAATGGTATTTTCTTTCTGTTTGCTTTAATTTCCCCAGAATGTTGTATAAGTATGAGTTTCGGGCTGTAAGAAGGAGAGTGGTAGTGG
CTAGTGAGCCCCAAGAATGCCTCTTCAGGACCTCCGATGTACTTATAATTAGGGTTGTACAGGGAATGAATGACGCAGAACGCACTGAAGCTGAGAAATGGTCCACAAAA
ACGCTGACCCTGTGGAAATAATTGATTCCAACAGTATTCGCTTTGTGGACATAACAAAAGAAGAAAATAAGAGTACAAGACTTTGGTTTAGATATAGATGGATGTGTCGA
CTGAGGCACAAACTAACTGC
Protein sequenceShow/hide protein sequence
MRLLRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIVSGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIWTQKGPEE