; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0215601 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0215601
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionprotein TAPETUM DETERMINANT 1-like
Genome locationCMiso1.1chr08:5235703..5236912
RNA-Seq ExpressionCmc08g0215601
SyntenyCmc08g0215601
Gene Ontology termsNA
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026828.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-4372.13Show/hide
Query:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI
        MA  +KL AALL +S +  GNCQCV N+I ISQKMTGFQIHGMTEW+VTI+NNC+CSQS++KLDCKGF TT SIDPSIL+++D ECLVNNG PIF S P+
Subjt:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI

Query:  TFKYAQTPKFNFKPISSQISCS
         F YAQ PKF+FK ISSQI+CS
Subjt:  TFKYAQTPKFNFKPISSQISCS

XP_008440637.1 PREDICTED: protein TAPETUM DETERMINANT 1-like [Cucumis melo]4.5e-6199.18Show/hide
Query:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI
        MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNG+PIFNSKPI
Subjt:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI

Query:  TFKYAQTPKFNFKPISSQISCS
        TFKYAQTPKFNFKPISSQISCS
Subjt:  TFKYAQTPKFNFKPISSQISCS

XP_022962948.1 uncharacterized protein At1g05835-like [Cucurbita moschata]1.4e-4372.95Show/hide
Query:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI
        MA S KL AALL +SF+S  N QC L+NITI Q MTGFQIHGMTEW+ T++NNC+CSQS++KLDC+GF TT SIDP IL+I+D ECLVNNG PIFNS PI
Subjt:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI

Query:  TFKYAQTPKFNFKPISSQISCS
        TF YAQ P+FNFKPISSQI+CS
Subjt:  TFKYAQTPKFNFKPISSQISCS

XP_031742370.1 uncharacterized protein At1g05835-like [Cucumis sativus]3.1e-5489.34Show/hide
Query:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI
        M I  KLLAALLVLS ISTGNCQC LNNI ISQ MTGFQIHGMTEW VTITNNCICSQSDLKLDCKGFATTLSIDPSIL+ISD+ECLVNNGQPIFNS+PI
Subjt:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI

Query:  TFKYAQTPKFNFKPISSQISCS
        TFKYAQ+PKFNFKP+SSQISCS
Subjt:  TFKYAQTPKFNFKPISSQISCS

XP_038881121.1 uncharacterized protein At1g05835-like [Benincasa hispida]3.0e-4980.33Show/hide
Query:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI
        MAI VKL+ ALLVLS +STGNCQC+LNNITISQ+MTGFQIHGMTEW VTI+NNC CSQS++K+DCKGF TT SIDPSIL++ D ECLVNNG PIFNS PI
Subjt:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI

Query:  TFKYAQTPKFNFKPISSQISCS
        TF YAQ P+FNFKPISSQISCS
Subjt:  TFKYAQTPKFNFKPISSQISCS

TrEMBL top hitse value%identityAlignment
A0A0A0KLZ6 Uncharacterized protein1.5e-5489.34Show/hide
Query:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI
        M I  KLLAALLVLS ISTGNCQC LNNI ISQ MTGFQIHGMTEW VTITNNCICSQSDLKLDCKGFATTLSIDPSIL+ISD+ECLVNNGQPIFNS+PI
Subjt:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI

Query:  TFKYAQTPKFNFKPISSQISCS
        TFKYAQ+PKFNFKP+SSQISCS
Subjt:  TFKYAQTPKFNFKPISSQISCS

A0A1S3B1L8 protein TAPETUM DETERMINANT 1-like2.2e-6199.18Show/hide
Query:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI
        MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNG+PIFNSKPI
Subjt:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI

Query:  TFKYAQTPKFNFKPISSQISCS
        TFKYAQTPKFNFKPISSQISCS
Subjt:  TFKYAQTPKFNFKPISSQISCS

A0A5D3CMA8 Protein TAPETUM DETERMINANT 1-like2.2e-6199.18Show/hide
Query:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI
        MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNG+PIFNSKPI
Subjt:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI

Query:  TFKYAQTPKFNFKPISSQISCS
        TFKYAQTPKFNFKPISSQISCS
Subjt:  TFKYAQTPKFNFKPISSQISCS

A0A6J1HGA0 uncharacterized protein At1g05835-like7.0e-4472.95Show/hide
Query:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI
        MA S KL AALL +SF+S  N QC L+NITI Q MTGFQIHGMTEW+ T++NNC+CSQS++KLDC+GF TT SIDP IL+I+D ECLVNNG PIFNS PI
Subjt:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI

Query:  TFKYAQTPKFNFKPISSQISCS
        TF YAQ P+FNFKPISSQI+CS
Subjt:  TFKYAQTPKFNFKPISSQISCS

A0A6J1KP98 protein TAPETUM DETERMINANT 1-like2.3e-3967.21Show/hide
Query:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI
        MA   KL AALL +S +  GNCQCV N+I I Q M+GFQIHGMTEW+VTI+N C+CSQS++KLDC+GF TT SIDPS+L+++D+ECLVNNG PIF S  I
Subjt:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI

Query:  TFKYAQTPKFNFKPISSQISCS
        TF YA  PKF+FK ISSQI+CS
Subjt:  TFKYAQTPKFNFKPISSQISCS

SwissProt top hitse value%identityAlignment
A8MS78 Uncharacterized protein At1g058357.3e-0630.17Show/hide
Query:  ALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNC-ICSQSDLKLDCKGFATTLSIDPS---ILSISDNECLVNNGQPIFNSKPITFKYA
        ALL+L   S   C+   +   + Q  T  +     ++ V + N C +C   +L+L C+GF  +L +DP+   +LS S   C+VN+G P+   + ++F Y+
Subjt:  ALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNC-ICSQSDLKLDCKGFATTLSIDPS---ILSISDNECLVNNGQPIFNSKPITFKYA

Query:  QTPKFNFKPISSQISC
         T +F  +P+S    C
Subjt:  QTPKFNFKPISSQISC

Q1G3T1 TPD1 protein homolog 11.1e-0426.02Show/hide
Query:  AISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCI--CSQSDLKLDCKGFATTLSIDPSILSISD-NECLVNNGQPIFNSK
        A+S KLL +  +    +     C  ++I + Q  T     G+  + V I N+C+  C+ +++ + C  F++   ++P +    D ++CLVN+GQP+   +
Subjt:  AISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCI--CSQSDLKLDCKGFATTLSIDPSILSISD-NECLVNNGQPIFNSK

Query:  PITFKYAQTPKFNFKPISSQISC
         ++F+YA +  F++    + +SC
Subjt:  PITFKYAQTPKFNFKPISSQISC

Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein5.2e-0730.17Show/hide
Query:  ALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNC-ICSQSDLKLDCKGFATTLSIDPS---ILSISDNECLVNNGQPIFNSKPITFKYA
        ALL+L   S   C+   +   + Q  T  +     ++ V + N C +C   +L+L C+GF  +L +DP+   +LS S   C+VN+G P+   + ++F Y+
Subjt:  ALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNC-ICSQSDLKLDCKGFATTLSIDPS---ILSISDNECLVNNGQPIFNSKPITFKYA

Query:  QTPKFNFKPISSQISC
         T +F  +P+S    C
Subjt:  QTPKFNFKPISSQISC

AT1G32583.1 FUNCTIONS IN: molecular_function unknown7.5e-0626.02Show/hide
Query:  AISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCI--CSQSDLKLDCKGFATTLSIDPSILSISD-NECLVNNGQPIFNSK
        A+S KLL +  +    +     C  ++I + Q  T     G+  + V I N+C+  C+ +++ + C  F++   ++P +    D ++CLVN+GQP+   +
Subjt:  AISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCI--CSQSDLKLDCKGFATTLSIDPSILSISD-NECLVNNGQPIFNSK

Query:  PITFKYAQTPKFNFKPISSQISC
         ++F+YA +  F++    + +SC
Subjt:  PITFKYAQTPKFNFKPISSQISC

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein3.0e-1535.25Show/hide
Query:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI
        MA ++K    +L+LS +S G C C    I I    TG +I G  EW VT+ N C C Q  + L C GFA    + P +L    N CL+  G  +      
Subjt:  MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPI

Query:  TFKYAQTPKFNFKPISSQISCS
         F YA  P + F+P+ S++  S
Subjt:  TFKYAQTPKFNFKPISSQISCS

AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein2.2e-1335.04Show/hide
Query:  KLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNC-ICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPITFKY
        K+L  +L L+F++ G   C LN +++ Q  TG  +    EW+V +TN C  C     KL C GF +   +  S+LS S + CL+N G  IF      F Y
Subjt:  KLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNC-ICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPITFKY

Query:  AQTPKFNFKPISSQISC
             F+ K I   I C
Subjt:  AQTPKFNFKPISSQISC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCTCTGTCAAGCTTCTCGCTGCCCTTCTTGTCCTCTCTTTCATTTCCACAGGAAACTGCCAGTGTGTATTGAATAATATAACAATCAGCCAAAAGATGACAGG
ATTTCAGATCCATGGAATGACAGAATGGGATGTAACAATAACCAACAACTGCATATGTTCTCAATCTGATTTGAAACTAGATTGCAAAGGCTTTGCAACTACTCTAAGCA
TCGATCCTTCAATCTTATCCATTTCTGATAACGAGTGTTTAGTCAACAATGGCCAACCTATTTTCAATTCCAAACCCATCACCTTCAAGTATGCACAAACCCCCAAATTC
AATTTCAAGCCTATCTCCTCCCAGATTTCTTGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
AGAAAGAAAAGGAAAATAGTAATCACTATAACACAATCACACAATGGCCATCTCTGTCAAGCTTCTCGCTGCCCTTCTTGTCCTCTCTTTCATTTCCACAGGAAACTGCC
AGTGTGTATTGAATAATATAACAATCAGCCAAAAGATGACAGGATTTCAGATCCATGGAATGACAGAATGGGATGTAACAATAACCAACAACTGCATATGTTCTCAATCT
GATTTGAAACTAGATTGCAAAGGCTTTGCAACTACTCTAAGCATCGATCCTTCAATCTTATCCATTTCTGATAACGAGTGTTTAGTCAACAATGGCCAACCTATTTTCAA
TTCCAAACCCATCACCTTCAAGTATGCACAAACCCCCAAATTCAATTTCAAGCCTATCTCCTCCCAGATTTCTTGTTCTTAAAAATCTTATTCATCTATCTTCCTTACGC
CCTCTTCTCATTTATGACTTAGTTCAAAGTTAGTGTCT
Protein sequenceShow/hide protein sequence
MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGQPIFNSKPITFKYAQTPKF
NFKPISSQISCS