CuGenDBv2

Gene ID	Cmc08g0216501
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Mannan endo-1,4-beta-mannosidase
Genome location	CMiso1.1chr08:5647252..5647679
RNA-Seq Expression	Cmc08g0216501
Synteny	Cmc08g0216501
Gene Ontology terms	GO:0071704 - organic substance metabolic process (biological process) GO:0005576 - extracellular region (cellular component) GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
InterPro domains	IPR045053 - Mannan endo-1,4-beta-mannosidase-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004143522.1 mannan endo-1,4-beta-mannosidase 7 [Cucumis sativus]

2.8e-21

96.55

Show/hide

Query:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
        MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRI+ARMRNIERWKRARAARG+RIGN
Subjt:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN

XP_008440745.1 PREDICTED: mannan endo-1,4-beta-mannosidase 7 isoform X2 [Cucumis melo]

5.7e-22

100

Show/hide

Query:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
        MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
Subjt:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN

XP_016899238.1 PREDICTED: mannan endo-1,4-beta-mannosidase 7 isoform X1 [Cucumis melo]

5.7e-22

100

Show/hide

Query:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
        MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
Subjt:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN

XP_022132624.1 mannan endo-1,4-beta-mannosidase 7 [Momordica charantia]

2.1e-21

98.28

Show/hide

Query:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
        MDSFRDGYEIILSQNPSTANVI QQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
Subjt:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN

XP_038883714.1 mannan endo-1,4-beta-mannosidase 7-like [Benincasa hispida]

5.7e-22

100

Show/hide

Query:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
        MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
Subjt:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJ64 Mannan endo-1,4-beta-mannosidase

1.4e-21

96.55

Show/hide

Query:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
        MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRI+ARMRNIERWKRARAARG+RIGN
Subjt:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN

A0A1S3B1W1 Mannan endo-1,4-beta-mannosidase

2.7e-22

100

Show/hide

Query:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
        MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
Subjt:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN

A0A1S4DTF5 Mannan endo-1,4-beta-mannosidase

2.7e-22

100

Show/hide

Query:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
        MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
Subjt:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN

A0A5D3CKZ0 Mannan endo-1,4-beta-mannosidase

2.7e-22

100

Show/hide

Query:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
        MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
Subjt:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN

A0A6J1BTM7 Mannan endo-1,4-beta-mannosidase

1.0e-21

98.28

Show/hide

Query:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
        MDSFRDGYEIILSQNPSTANVI QQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN
Subjt:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN

SwissProt top hits

e value

%identity

Alignment

Q0JKM9 Mannan endo-1,4-beta-mannosidase 1

1.3e-05

Show/hide

Query:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGK
        MDS+RDGYE++  + PST  VIT  SRRL  + + FAR R      +A+ ARGK
Subjt:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGK

Q9FJZ3 Mannan endo-1,4-beta-mannosidase 7

9.4e-12

60.32

Show/hide

Query:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRAR-----AARGKRIGN
        +D+F+DGY IILSQ+ ST NVI+QQSR+L  IR+IFARM N+E+WKRAR       RG +I N
Subjt:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRAR-----AARGKRIGN

Arabidopsis top hits

e value

%identity

Alignment

AT5G66460.1 Glycosyl hydrolase superfamily protein

6.7e-13

60.32

Show/hide

Query:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRAR-----AARGKRIGN
        +D+F+DGY IILSQ+ ST NVI+QQSR+L  IR+IFARM N+E+WKRAR       RG +I N
Subjt:  MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRAR-----AARGKRIGN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATTCTTTTCGCGATGGGTACGAAATAATTCTGAGCCAAAACCCTTCAACGGCGAACGTGATTACTCAACAATCTCGAAGACTGTATCAAATCAGAAGGATTTTTGC
TAGAATGCGAAATATCGAGAGGTGGAAGAGGGCAAGGGCGGCAAGGGGGAAACGAATAGGAAATTGA

mRNA sequence

Show/hide mRNA sequence

GCTGGAGGCCTATTCTGGCAGCTACTGACGGAAGGAATGGATTCTTTTCGCGATGGGTACGAAATAATTCTGAGCCAAAACCCTTCAACGGCGAACGTGATTACTCAACA
ATCTCGAAGACTGTATCAAATCAGAAGGATTTTTGCTAGAATGCGAAATATCGAGAGGTGGAAGAGGGCAAGGGCGGCAAGGGGGAAACGAATAGGAAATTGAGAAGAGA
AAAGAACTTACCTGCAAAATGGAGAATCTGGGGTTGTGTTTTAATGGCGGATGAAGAGGTTTGGGGAAGGGTTTCTGTCTTTGAGATGAATCATTCTTTCGTCCAGGAAG
AAAGCTGAAACTTTTTTTGTGGTTTTTGATTTGGGGTTTGCAAGTTCTTATAGATATAAGTATAAATCATATAATAGAAAGAAACTGAAAGTAGGATC

Protein sequence

Show/hide protein sequence

MDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIFARMRNIERWKRARAARGKRIGN

Cmc08g0216501 (gene) of Melon (Charmono) v1.1 genome