; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0217731 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0217731
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionSerine/arginine-rich splicing factor SR45a
Genome locationCMiso1.1chr08:6340880..6344572
RNA-Seq ExpressionCmc08g0217731
SyntenyCmc08g0217731
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0004620 - phospholipase activity (molecular function)
GO:0008081 - phosphoric diester hydrolase activity (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025634.1 serine/arginine-rich splicing factor SR45a [Cucumis melo var. makuwa]2.5e-13299.17Show/hide
Query:  IAKGTLDLLPPGELLQDQDPDLDHDRGPGPGPDHGQGQDPQVVEDQGPEVVGASSRDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPR
        I  GTLDLLPPGELLQDQDPDLDHDRGPGPGPDHGQGQDPQVVEDQGPEVVGASSRDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPR
Subjt:  IAKGTLDLLPPGELLQDQDPDLDHDRGPGPGPDHGQGQDPQVVEDQGPEVVGASSRDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPR

Query:  TRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYS
        TRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYS
Subjt:  TRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYS

Query:  PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
        PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
Subjt:  PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR

KAE8647621.1 hypothetical protein Csa_003197 [Cucumis sativus]3.2e-9596.81Show/hide
Query:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG
        R+HANNPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLG
Subjt:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG

Query:  LKSTRDSGYR-GDRG-SRYR-GGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
        LKSTRDSGYR GDRG SRYR GGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
Subjt:  LKSTRDSGYR-GDRG-SRYR-GGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR

XP_016899368.1 PREDICTED: serine/arginine-rich splicing factor SR45a [Cucumis melo]2.0e-100100Show/hide
Query:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG
        RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG
Subjt:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG

Query:  LKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
        LKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
Subjt:  LKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR

XP_031743118.1 serine/arginine-rich splicing factor SR45a [Cucumis sativus]3.2e-9596.81Show/hide
Query:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG
        R+HANNPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLG
Subjt:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG

Query:  LKSTRDSGYR-GDRG-SRYR-GGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
        LKSTRDSGYR GDRG SRYR GGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
Subjt:  LKSTRDSGYR-GDRG-SRYR-GGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR

XP_038881911.1 serine/arginine-rich splicing factor SR45a [Benincasa hispida]2.0e-9294.62Show/hide
Query:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG
        RDHA+NPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLG
Subjt:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG

Query:  LKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYS-PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
        LKSTRD+GYRGDRGSRYRGGGSFR+DYGYRRSPRRSPYRGAREYS PRHSPPY GGRSRRDHSRSPP   PPYGGSPDRRYPRGSR
Subjt:  LKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYS-PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR

TrEMBL top hitse value%identityAlignment
A0A0A0KMM4 RRM domain-containing protein1.6e-9596.81Show/hide
Query:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG
        R+HANNPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLG
Subjt:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG

Query:  LKSTRDSGYR-GDRG-SRYR-GGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
        LKSTRDSGYR GDRG SRYR GGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
Subjt:  LKSTRDSGYR-GDRG-SRYR-GGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR

A0A1S4DTT1 serine/arginine-rich splicing factor SR45a9.4e-101100Show/hide
Query:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG
        RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG
Subjt:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG

Query:  LKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
        LKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
Subjt:  LKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR

A0A5A7SJ12 Serine/arginine-rich splicing factor SR45a1.2e-13299.17Show/hide
Query:  IAKGTLDLLPPGELLQDQDPDLDHDRGPGPGPDHGQGQDPQVVEDQGPEVVGASSRDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPR
        I  GTLDLLPPGELLQDQDPDLDHDRGPGPGPDHGQGQDPQVVEDQGPEVVGASSRDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPR
Subjt:  IAKGTLDLLPPGELLQDQDPDLDHDRGPGPGPDHGQGQDPQVVEDQGPEVVGASSRDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPR

Query:  TRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYS
        TRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYS
Subjt:  TRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYS

Query:  PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
        PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
Subjt:  PRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR

A0A6J1GFF0 serine/arginine-rich splicing factor SR45a1.1e-8892.97Show/hide
Query:  DHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGL
        ++ NNPGNTLYVTGLSTRVTERDLE+HFSKEGKV+SCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLGL
Subjt:  DHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGL

Query:  KSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
        KSTRDSGYRG+RGSRYR GGSFREDYG+RRSPRRSPYRGAREYSPRHS PPYGGGRSRRDHSRS PPYSP  GGSPDRRYPRGSR
Subjt:  KSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR

A0A6J1INV2 serine/arginine-rich splicing factor SR45a1.1e-8892.97Show/hide
Query:  DHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGL
        ++ NNPGNTLYVTGLSTRVTERDLE+HFSKEGKV+SCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLGL
Subjt:  DHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGL

Query:  KSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR
        KSTRDSGYRG+RGSRYR GGSFREDYG+RRSPRRSPYRGAREYSPRHS PPYGGGRSRRDHSRS PPYSP  GGSPDRRYPRGSR
Subjt:  KSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR

SwissProt top hitse value%identityAlignment
P62995 Transformer-2 protein homolog beta1.4e-1641.36Show/hide
Query:  ASSRDHANN-----PGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRT
        ++ R H  N     P   L V GLS   TERDL + FSK G +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP T
Subjt:  ASSRDHANN-----PGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRT

Query:  PTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY
        PTPG Y+G  +      RD   RG DRG          YRGGG      G+R +  R      R  SP +S   GG RSR R  S SP  Y
Subjt:  PTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY

P62996 Transformer-2 protein homolog beta1.4e-1641.36Show/hide
Query:  ASSRDHANN-----PGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRT
        ++ R H  N     P   L V GLS   TERDL + FSK G +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP T
Subjt:  ASSRDHANN-----PGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRT

Query:  PTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY
        PTPG Y+G  +      RD   RG DRG          YRGGG      G+R +  R      R  SP +S   GG RSR R  S SP  Y
Subjt:  PTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY

Q10422 Uncharacterized RNA-binding protein C25G10.011.6e-1736.36Show/hide
Query:  SSRDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHY
        S+ + + N GN L+V+G+++R+ E +L+  FSK G V    ++ EP T+ SRGF F++   V++A   + +LN     GR + V+K++R RP +PTPG Y
Subjt:  SSRDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHY

Query:  LGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPR-RSPYRGA---REYSP------RHSPPYGGGRSRRDHSRS
        +G    R+S    D  S  + GG  R +Y  R S R R+ YR +   RE+SP      R++      R R  H RS
Subjt:  LGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPR-RSPYRGA---REYSP------RHSPPYGGGRSRRDHSRS

Q3ZBT6 Transformer-2 protein homolog beta1.4e-1641.36Show/hide
Query:  ASSRDHANN-----PGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRT
        ++ R H  N     P   L V GLS   TERDL + FSK G +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP T
Subjt:  ASSRDHANN-----PGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRT

Query:  PTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY
        PTPG Y+G  +      RD   RG DRG          YRGGG      G+R +  R      R  SP +S   GG RSR R  S SP  Y
Subjt:  PTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY

Q84TH4 Serine/arginine-rich splicing factor SR45a6.0e-3655.31Show/hide
Query:  ANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKS
        A NPGN+LYVTGLS RVTERDLEDHF+KEGKV    LV++P TR SRGF F++M +V DANRC++ L+ SVL+GR ITVEK+RR+R RTPTPG YLGL++
Subjt:  ANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKS

Query:  TRD-------SGYRGDRGSRYRG-------GGSFREDYGYR-RSPRRSP-YRGAREYSPRHSP-PYGGGRSRRDHSRSP
         R        S  R    SR R        G S+   YG R RS   SP YR  R YSP  SP P      RRD S SP
Subjt:  TRD-------SGYRGDRGSRYRG-------GGSFREDYGYR-RSPRRSP-YRGAREYSPRHSP-PYGGGRSRRDHSRSP

Arabidopsis top hitse value%identityAlignment
AT1G07350.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.3e-3755.31Show/hide
Query:  ANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKS
        A NPGN+LYVTGLS RVTERDLEDHF+KEGKV    LV++P TR SRGF F++M +V DANRC++ L+ SVL+GR ITVEK+RR+R RTPTPG YLGL++
Subjt:  ANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKS

Query:  TRD-------SGYRGDRGSRYRG-------GGSFREDYGYR-RSPRRSP-YRGAREYSPRHSP-PYGGGRSRRDHSRSP
         R        S  R    SR R        G S+   YG R RS   SP YR  R YSP  SP P      RRD S SP
Subjt:  TRD-------SGYRGDRGSRYRG-------GGSFREDYGYR-RSPRRSP-YRGAREYSPRHSP-PYGGGRSRRDHSRSP

AT4G35785.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-5163.83Show/hide
Query:  SSRDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHY
        S      NPG TLYVTGLSTRVT++DLE HF+KEGKVASCFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQSVLEGRYITVE+SRRKRPRTPTPGHY
Subjt:  SSRDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHY

Query:  LGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY-PRGSR
        LGLKS+RDS   G R S  RG    R+DY  RRSPR       R+YSPR        RS   H RSP   S       +RRY PRGSR
Subjt:  LGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY-PRGSR

AT4G35785.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.6e-5264.52Show/hide
Query:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG
        R    NPG TLYVTGLSTRVT++DLE HF+KEGKVASCFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQSVLEGRYITVE+SRRKRPRTPTPGHYLG
Subjt:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLG

Query:  LKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY-PRGSR
        LKS+RDS   G R S  RG    R+DY  RRSPR       R+YSPR        RS   H RSP   S       +RRY PRGSR
Subjt:  LKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY-PRGSR

AT4G35785.3 RNA-binding (RRM/RBD/RNP motifs) family protein7.5e-3477.38Show/hide
Query:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEK
        R    NPG TLYVTGLSTRVT++DLE HF+KEGKVASCFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQSVLEGRYITVE+
Subjt:  RDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEK

AT4G35785.4 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-3375.58Show/hide
Query:  SSRDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEK
        S      NPG TLYVTGLSTRVT++DLE HF+KEGKVASCFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQSVLEGRYITVE+
Subjt:  SSRDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSVLEGRYITVEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATCGCAAAAGGTACTCTCGATCTCCTTCCCCCTGGCGAGCTCCTTCAAGATCAAGATCCAGATCTAGATCACGATCGAGGCCCAGGTCCAGGTCCAGATCATGG
TCAAGGCCAAGATCCCCAAGTCGTGGAAGATCAAGGTCCAGAAGTCGTGGGAGCTTCTTCCAGGGACCATGCCAACAATCCTGGGAATACTCTTTATGTCACTGGTCTAT
CTACAAGAGTCACTGAAAGAGACCTTGAAGATCATTTTTCCAAGGAAGGCAAGGTAGCTTCTTGTTTTCTTGTGGTTGAGCCTCGAACACGGATTTCTCGTGGTTTTGCA
TTTGTTACTATGGACAATGTAGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAGTCAGTTCTAGAAGGTCGATATATAACTGTGGAGAAGTCGCGGCGGAAACGGCC
AAGAACTCCAACACCAGGACACTATTTGGGGTTGAAAAGCACTAGAGACTCTGGCTATCGTGGCGATCGAGGTAGTAGATATCGTGGTGGTGGCTCCTTCCGTGAAGACT
ATGGGTATCGTCGGTCTCCAAGACGCTCACCATATCGAGGGGCTCGTGAATACTCCCCTAGACACTCCCCCCCTTATGGTGGGGGGAGATCAAGGAGGGATCACTCAAGG
TCACCGCCACCTTACTCTCCTCCTTATGGTGGCAGCCCGGATAGGAGGTATCCTCGTGGCTCTAGATGA
mRNA sequenceShow/hide mRNA sequence
GCTAGGGATGTGAAGCGAGAGTGCACGAAAGTATAGCATGCACCCAATGTAGCAGATAATTATTAAGAAAAACAATACGGAAAAATTGTTCTCGCGAAGCCATAAAGTTT
CTCACCTGGGGCTCCTACAATTCACGACGGCGAGATTTTGACTGCTGAGGCTCGTAGGGAGGTCGTCTCCAGAAACCCTAAAAACTCATTTCTTTATCCGTACTCTTCTT
CAGCTTTTGCTGGCCGCCGTTTTTATTTTGATCTCATTGTGAAGAAATGGCCGATGTTCATCGCAAAAGGTACTCTCGATCTCCTTCCCCCTGGCGAGCTCCTTCAAGAT
CAAGATCCAGATCTAGATCACGATCGAGGCCCAGGTCCAGGTCCAGATCATGGTCAAGGCCAAGATCCCCAAGTCGTGGAAGATCAAGGTCCAGAAGTCGTGGGAGCTTC
TTCCAGGGACCATGCCAACAATCCTGGGAATACTCTTTATGTCACTGGTCTATCTACAAGAGTCACTGAAAGAGACCTTGAAGATCATTTTTCCAAGGAAGGCAAGGTAG
CTTCTTGTTTTCTTGTGGTTGAGCCTCGAACACGGATTTCTCGTGGTTTTGCATTTGTTACTATGGACAATGTAGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAG
TCAGTTCTAGAAGGTCGATATATAACTGTGGAGAAGTCGCGGCGGAAACGGCCAAGAACTCCAACACCAGGACACTATTTGGGGTTGAAAAGCACTAGAGACTCTGGCTA
TCGTGGCGATCGAGGTAGTAGATATCGTGGTGGTGGCTCCTTCCGTGAAGACTATGGGTATCGTCGGTCTCCAAGACGCTCACCATATCGAGGGGCTCGTGAATACTCCC
CTAGACACTCCCCCCCTTATGGTGGGGGGAGATCAAGGAGGGATCACTCAAGGTCACCGCCACCTTACTCTCCTCCTTATGGTGGCAGCCCGGATAGGAGGTATCCTCGT
GGCTCTAGATGAGGGTGAAGCCCCTTTTAATGTACTTTTATGGTTGCTGTTAGTCAAGGACCAAGTTGGATGGTTGTGTGTACTCGAATCTCTGTCTCGTAGTTGTAAGC
AGTCCAACTGGCCGAATGGTCATCATCGTATGCTTTTTTAGGTTCGGTGTTCTAACTTTCTTCTAGTAAACAATATTGTTACAAATATTGGTATGTGTCTTGTGAATCTT
ACTTTTCGCTTTTATCACTGGGGTTTATTAGACAATATGGTAAAGTAGTTTTTTCCCTTGCCATTTAAAGGTATTTTTACAATGCTTTATATTATTTTTATTAAAGAACT
ATGGGGTTATCATTAAGATAATGTGAAAATAGT
Protein sequenceShow/hide protein sequence
MFIAKGTLDLLPPGELLQDQDPDLDHDRGPGPGPDHGQGQDPQVVEDQGPEVVGASSRDHANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFA
FVTMDNVDDANRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSR
SPPPYSPPYGGSPDRRYPRGSR