| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004134991.2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 [Cucumis sativus] | 6.1e-109 | 95.93 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
MSEKGEKGFSVQK+PAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDA NTFSMKYSGKNGD+GKGGKGANTKAS+AKEPQ+LELKIEQ EL
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYG+TDSEICVIANVCPDTTDEVFALLPSLK K
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Query: RSKLSEPLNNVLSELAKVKSS
RSKLSEP+NNVLSELAKVKSS
Subjt: RSKLSEPLNNVLSELAKVKSS
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| XP_008440955.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform X1 [Cucumis melo] | 1.3e-111 | 99.1 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPN+FSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQ EL
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Query: RSKLSEPLNNVLSELAKVKSS
RSKLSEPLNNVLSELAKVKSS
Subjt: RSKLSEPLNNVLSELAKVKSS
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| XP_008440960.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform X2 [Cucumis melo] | 5.2e-108 | 97.29 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
MSEKGEKGFSVQKKPAKSSLKSSALKD GKDDSLSKLKKGRKVQFDAQGSVDAPN+FSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQ EL
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Query: RSKLSEPLNNVLSELAKVKSS
RSKLSEPLNNVLSELAKVKSS
Subjt: RSKLSEPLNNVLSELAKVKSS
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| XP_011658103.1 DNA-directed RNA polymerases IV and V subunit 4 isoform X2 [Cucumis sativus] | 2.4e-105 | 94.12 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
MSEKGEKGFSVQK+PAKSSLKSSALKD GKDDSLSKLKKGRKVQFDAQGSVDA NTFSMKYSGKNGD+GKGGKGANTKAS+AKEPQ+LELKIEQ EL
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYG+TDSEICVIANVCPDTTDEVFALLPSLK K
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Query: RSKLSEPLNNVLSELAKVKSS
RSKLSEP+NNVLSELAKVKSS
Subjt: RSKLSEPLNNVLSELAKVKSS
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| XP_038881037.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Benincasa hispida] | 4.5e-104 | 92.76 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
MS+KGEKGF VQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDA +TFSMKYSGKNGD+GKGGKG NTKAS AKEPQ LELKIEQ EL
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
PKNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIPTSFDRGLQYAKRANHYVN+ESVRPVLETLKK+G+T+SEICVIANVCPDTTDEVFALLPSLK K
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Query: RSKLSEPLNNVLSELAKVKSS
RSKLSEPLNNVL ELAKVKSS
Subjt: RSKLSEPLNNVLSELAKVKSS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KH45 RPOL4c domain-containing protein | 3.0e-109 | 95.93 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
MSEKGEKGFSVQK+PAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDA NTFSMKYSGKNGD+GKGGKGANTKAS+AKEPQ+LELKIEQ EL
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYG+TDSEICVIANVCPDTTDEVFALLPSLK K
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Query: RSKLSEPLNNVLSELAKVKSS
RSKLSEP+NNVLSELAKVKSS
Subjt: RSKLSEPLNNVLSELAKVKSS
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| A0A1S3B2C2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 | 6.4e-112 | 99.1 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPN+FSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQ EL
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Query: RSKLSEPLNNVLSELAKVKSS
RSKLSEPLNNVLSELAKVKSS
Subjt: RSKLSEPLNNVLSELAKVKSS
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| A0A1S3B2C7 DNA-directed RNA polymerases IV and V subunit 4 isoform X2 | 2.5e-108 | 97.29 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
MSEKGEKGFSVQKKPAKSSLKSSALKD GKDDSLSKLKKGRKVQFDAQGSVDAPN+FSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQ EL
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQGEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Query: RSKLSEPLNNVLSELAKVKSS
RSKLSEPLNNVLSELAKVKSS
Subjt: RSKLSEPLNNVLSELAKVKSS
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| A0A6J1EJD9 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 | 3.2e-95 | 86.49 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGAN-TKASVAKEPQSLELKIEQGE
MSEKGEKGF VQKKP KSSLKSSA KDASLKGKDDSLSK KKGRKVQFDAQGSVDA S+K+SGKNGD+GKGGKG N KASV+KE Q LELKIEQ E
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGAN-TKASVAKEPQSLELKIEQGE
Query: LPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKN
LPKNVKCQCLMDCEAAQLLQGIQDQM LSADPTIKIPTSFDRGLQYAKRANHYVN E VRPVLETLKKYG+ DSEICVIANVCPDTTDEVF+L+PSLK+
Subjt: LPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKN
Query: KRSKLSEPLNNVLSELAKVKSS
KRSKL+EPLNNVL ELAK+KSS
Subjt: KRSKLSEPLNNVLSELAKVKSS
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| A0A6J1KMD1 DNA-directed RNA polymerases IV and V subunit 4-like | 8.4e-96 | 87.39 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGAN-TKASVAKEPQSLELKIEQGE
MSEKGEKGF VQKKP KSSLKS A KDASLKGKDDSLSK KKGRKVQFDAQGSVDA SMK+ GKNGD+GKGGKG N KASV+KE Q LELKIEQ E
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGKNGDMGKGGKGAN-TKASVAKEPQSLELKIEQGE
Query: LPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKN
LPKNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIPTSFDRGLQYAKRANHYVN ESVRPVLETLKKYG+ DSEICVIANVCPDT DEVFAL+PSLK+
Subjt: LPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKN
Query: KRSKLSEPLNNVLSELAKVKSS
KRSKL+EPLNNVLSELAK+KSS
Subjt: KRSKLSEPLNNVLSELAKVKSS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O15514 DNA-directed RNA polymerase II subunit RPB4 | 1.5e-04 | 25.35 | Show/hide |
Query: ASVAKEPQSLELKIEQGEL--PKNVK-CQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICV
A+ +P++ +++ + +L PK + + L++ E LL+ + Q SA+ ++ F + L Y R + + N E++ V L + + E+
Subjt: ASVAKEPQSLELKIEQGEL--PKNVK-CQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICV
Query: IANVCPDTTDEVFALLPSLKNKRSKLSEPLNNVLSELAKVKS
+AN+CP+T +E AL+PSL+ + E L +L ++ +S
Subjt: IANVCPDTTDEVFALLPSLKNKRSKLSEPLNNVLSELAKVKS
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| O48890 DNA-directed RNA polymerase II subunit 4 | 6.1e-19 | 37.04 | Show/hide |
Query: KEPQSLELKIEQGELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPD
+E + ELKI + +K +CLM+CE + +L+ +Q+ +S DP ++ F++ LQY KR + Y N ++VR V E L ++ +T+ E+CV+ N+CP+
Subjt: KEPQSLELKIEQGELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPD
Query: TTDEVFALLPSLKNK-RSKLSEPLNNVLSELAKVK
T +E A++PSLK K R+ E + +L++L+ VK
Subjt: TTDEVFALLPSLKNK-RSKLSEPLNNVLSELAKVK
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| Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 1.6e-06 | 28.15 | Show/hide |
Query: ELPKNVK-CQCLMDCEAAQLLQ---GIQDQ----------MVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCP
+ P+++K + L++ E A LL+ GI + ++ L + I +F + L YA++ + Y N S++ V L K + + EI +AN+CP
Subjt: ELPKNVK-CQCLMDCEAAQLLQ---GIQDQ----------MVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCP
Query: DTTDEVFALLPSLKNKRSKLSEPLNNVLSELAKVK
+ +DE +L+PSLK + L +L EL+ ++
Subjt: DTTDEVFALLPSLKNKRSKLSEPLNNVLSELAKVK
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| Q6DBA5 DNA-directed RNA polymerases IV and V subunit 4 | 5.0e-37 | 45.74 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGK--NGDMGKGGKGANTKASVAKEPQSLELKIEQG
MSEKG KG KSSLKS KD GKD S +KLKKGRK+ FD + ++ + K GK S S ELK
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNTFSMKYSGK--NGDMGKGGKGANTKASVAKEPQSLELKIEQG
Query: ELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLK
+LP+N +C+MDCEA Q+L GI+ Q+V LS DP+IKIP S+DR L Y + HY N +SVR VLE LK YGI+D E+CVIAN ++ DEV A +PSLK
Subjt: ELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLK
Query: NKRSKLSEPLNNVLSELAKVKSS
K+ +++PL + L EL+K+K S
Subjt: NKRSKLSEPLNNVLSELAKVKSS
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| Q9D7M8 DNA-directed RNA polymerase II subunit RPB4 | 1.5e-04 | 25.35 | Show/hide |
Query: ASVAKEPQSLELKIEQGEL--PKNVK-CQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICV
A+ +P++ +++ + +L PK + + L++ E LL+ + Q SA+ ++ F + L Y R + + N E++ V L + + E+
Subjt: ASVAKEPQSLELKIEQGEL--PKNVK-CQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICV
Query: IANVCPDTTDEVFALLPSLKNKRSKLSEPLNNVLSELAKVKS
+AN+CP+T +E AL+PSL+ + E L +L ++ +S
Subjt: IANVCPDTTDEVFALLPSLKNKRSKLSEPLNNVLSELAKVKS
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