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Cmc08g0218641 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0218641
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
Genome locationCMiso1.1chr08:6841405..6844564
RNA-Seq ExpressionCmc08g0218641
SyntenyCmc08g0218641
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647470.1 hypothetical protein Csa_004096 [Cucumis sativus]3.4e-5381.01Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTE ADPPEKQ TNPPETEKQI+PLPEEKPSENNPPEP VSDSVTEN T
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT

Query:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        V      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

XP_004148639.1 neurofilament medium polypeptide isoform X2 [Cucumis sativus]3.4e-5381.01Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTE ADPPEKQ TNPPETEKQI+PLPEEKPSENNPPEP VSDSVTEN T
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT

Query:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        V      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

XP_008441002.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo]4.0e-7090.23Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSEN
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK                KEGNKEKTEGADPPEKQ TNPPETEKQIDPLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

XP_008441003.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 [Cucumis melo]3.0e-7399.37Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQ TNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT

Query:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

XP_031744063.1 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis sativus]3.5e-5073.99Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK---------------KEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSENN
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDK               KEGNKEKTE ADPPEKQ TNPPETEKQI+PLPEEKPSENN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK---------------KEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSENN

Query:  PPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        PPEP VSDSVTEN TV      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  PPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

TrEMBL top hitse value%identityAlignment
A0A0A0KFS6 Uncharacterized protein1.7e-5073.99Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK---------------KEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSENN
        MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDK               KEGNKEKTE ADPPEKQ TNPPETEKQI+PLPEEKPSENN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK---------------KEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSENN

Query:  PPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        PPEP VSDSVTEN TV      METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Subjt:  PPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

A0A1S3B2F3 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X21.4e-7399.37Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQ TNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNT

Query:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  VISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

A0A1S3B2G7 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X11.9e-7090.23Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSEN
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK                KEGNKEKTEGADPPEKQ TNPPETEKQIDPLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

A0A5A7SHD6 Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X11.9e-7090.23Show/hide
Query:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSEN
        MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK                KEGNKEKTEGADPPEKQ TNPPETEKQIDPLPEEKPSEN
Subjt:  MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDK----------------KEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSEN

Query:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
        NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN
Subjt:  NPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN

A0A6J1GDB0 pollen-specific leucine-rich repeat extensin-like protein 12.0e-1444.78Show/hide
Query:  MGACATKPKGMKAESGEAPEELPA----------ETK-PDHVGDEKAKEIVVDDDKKE----------GNKEKTEGADPPEKQ-----------------
        MGACATKPK +K +SG+AP   PA          ETK  D   D +  EI VD+DK +           ++EKT  ADP EK+                 
Subjt:  MGACATKPKGMKAESGEAPEELPA----------ETK-PDHVGDEKAKEIVVDDDKKE----------GNKEKTEGADPPEKQ-----------------

Query:  --ATNPPETEKQIDPLPEEKPSENNP--PEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEV-KVI
           T PPETEK+I+P  EEKPSE NP  PEP VSDSVTEN   I                    E  IKVEV  EN  PPEKTES EKPTETE+ V KVI
Subjt:  --ATNPPETEKQIDPLPEEKPSENNP--PEPAVSDSVTENNTVISSEKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEV-KVI

Query:  N
        +
Subjt:  N

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTGTGCCACTAAGCCGAAGGGTATGAAGGCGGAGTCCGGCGAGGCTCCGGAGGAGTTGCCGGCCGAAACCAAACCGGATCATGTCGGTGATGAAAAGGCGAA
GGAGATCGTGGTCGACGATGACAAGAAAGAAGGTAATAAGGAGAAGACAGAAGGTGCAGATCCACCGGAGAAGCAAGCGACCAACCCACCGGAAACTGAAAAGCAAATAG
ACCCACTACCGGAGGAGAAGCCGTCCGAAAACAACCCACCGGAGCCAGCAGTTTCGGACTCTGTTACAGAAAACAACACTGTAATCTCATCAGAGAAATTAATGGAAACC
CCAAATGAGGAAAACAAAGAAATTGACCCGAAAAATGAAGACAAGATCAAAGTGGAAGTTACCACTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCATCGGAGAAACC
AACTGAAACAGAGAAAGAAGTGAAGGTAATTAATTAA
mRNA sequenceShow/hide mRNA sequence
TTGCCGAAAATCCCTCTTTATAAATTATTAAACCCATTTTCTCTTTGTTTCTCACTTTCATTCATTCATTCACACACACACACACAACGACAACAGAAGAAAAAAAAAGA
AAAGATGGGAGCTTGTGCCACTAAGCCGAAGGGTATGAAGGCGGAGTCCGGCGAGGCTCCGGAGGAGTTGCCGGCCGAAACCAAACCGGATCATGTCGGTGATGAAAAGG
CGAAGGAGATCGTGGTCGACGATGACAAGAAAGAAGGTAATAAGGAGAAGACAGAAGGTGCAGATCCACCGGAGAAGCAAGCGACCAACCCACCGGAAACTGAAAAGCAA
ATAGACCCACTACCGGAGGAGAAGCCGTCCGAAAACAACCCACCGGAGCCAGCAGTTTCGGACTCTGTTACAGAAAACAACACTGTAATCTCATCAGAGAAATTAATGGA
AACCCCAAATGAGGAAAACAAAGAAATTGACCCGAAAAATGAAGACAAGATCAAAGTGGAAGTTACCACTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCATCGGAGA
AACCAACTGAAACAGAGAAAGAAGTGAAGGTAATTAATTAATAAATAATTTTCAAAACAAAAATCCCTTCATTAGTTAATTACGCTGAGGAACCAATATCCAAATTGTTT
CATTTTCGTCTTCCTTTTTTCCTTTTAGGTATGTTATGAATTATGGGGAAAAATACATACCTTCATCTTTACTTCTCTCTTAACTACGTACTCTTTGTTTCTACTTTATG
TTTCTGTCTCTGTT
Protein sequenceShow/hide protein sequence
MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPEKQATNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNTVISSEKLMET
PNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN