| GenBank top hits | e value | %identity | Alignment |
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| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 3.2e-80 | 80.32 | Show/hide |
Query: GLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQY
G + + +KVCKL+KSIYGLKQASRSWNIRFDTAIKSYGFEQN+DEPCVYK+I+NS VAFLI+YVDDILL NDV +LTD+K+WL TQFQMKDL AQY
Subjt: GLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQY
Query: VLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
+LGIQIVRNRKNKTLAMSQ SYIDK+LSRYKMQNSKKG L +R+GIHLSK+QC K PQEVEDM NIPY+SAV SLMY MLCTRPDICY
Subjt: VLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-83 | 84.04 | Show/hide |
Query: GLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQY
G ++ + +KVCKL+KSIYGLKQASRSWNIRFDT IKSYGFEQN+DEPCVYKRIINSTVAFL++YVDDILL N+V HLTDIKEWL TQFQMKDL +AQY
Subjt: GLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQY
Query: VLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
VLGIQIV+NRKNKTLAMSQTSYIDKMLSRYKMQNSKKG+L YRYGIHLSK+QC K PQEV+DMSNIPYASAV SLMY MLC RPDICY
Subjt: VLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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| KAA0066797.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-80 | 78.84 | Show/hide |
Query: RGLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQ
+G ++ + +KVCKL+KSIYGLK ASRSWNIRFDTAIK YGFEQN+DEPCVYK+++NS VAFL++YVDDILL +NDV +L DIK+WL TQFQMKDLR+AQ
Subjt: RGLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQ
Query: YVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
YVLGIQIVRNRKN+TLAMSQ SYIDKMLSR KMQNSKKG+L YRYGIH SK+QC K P++VEDM NIPYASAVRSLMY MLCTRPDICY
Subjt: YVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 7.6e-82 | 85.16 | Show/hide |
Query: KNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQYVLGIQI
+ +K+CKL+KSIYGLKQASRS NIRFDTAIKSYG EQN+DEPCVYKRI+NSTVAFL++YVDDILL NDV HL DIK+WLA QFQMKDL NAQYVLG+QI
Subjt: KNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQYVLGIQI
Query: VRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
VRNRKNKTLAMSQTSYIDKMLSRYKM NSKKG+L YRYGIHLSK+QC K PQEVEDMSNIPYASAV SLMYVMLCTRP+ICY
Subjt: VRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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| TYK11050.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-84 | 84.57 | Show/hide |
Query: GLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQY
G ++ + +KVCKLKKSIYGLKQ +RSWNIRFDTAIKSYGFEQN+DEPCVYKR IN+TVAFL++YVDDILL NDV HLTDIKEWLATQFQMKDL NAQY
Subjt: GLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQY
Query: VLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
VLGIQIVRN KNKTLAMSQTSYIDKMLSRYKMQNSKKG+L YRYGIHLSK+QC K PQEVEDMSNIPYASA+ SLMY MLCTR DICY
Subjt: VLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 5.1e-84 | 84.04 | Show/hide |
Query: GLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQY
G ++ + +KVCKL+KSIYGLKQASRSWNIRFDT IKSYGFEQN+DEPCVYKRIINSTVAFL++YVDDILL N+V HLTDIKEWL TQFQMKDL +AQY
Subjt: GLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQY
Query: VLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
VLGIQIV+NRKNKTLAMSQTSYIDKMLSRYKMQNSKKG+L YRYGIHLSK+QC K PQEV+DMSNIPYASAV SLMY MLC RPDICY
Subjt: VLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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| A0A5A7VI37 Gag/pol protein | 1.5e-80 | 78.84 | Show/hide |
Query: RGLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQ
+G ++ + +KVCKL+KSIYGLK ASRSWNIRFDTAIK YGFEQN+DEPCVYK+++NS VAFL++YVDDILL +NDV +L DIK+WL TQFQMKDLR+AQ
Subjt: RGLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQ
Query: YVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
YVLGIQIVRNRKN+TLAMSQ SYIDKMLSR KMQNSKKG+L YRYGIH SK+QC K P++VEDM NIPYASAVRSLMY MLCTRPDICY
Subjt: YVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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| A0A5D3BX45 Gag/pol protein | 3.7e-82 | 85.16 | Show/hide |
Query: KNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQYVLGIQI
+ +K+CKL+KSIYGLKQASRS NIRFDTAIKSYG EQN+DEPCVYKRI+NSTVAFL++YVDDILL NDV HL DIK+WLA QFQMKDL NAQYVLG+QI
Subjt: KNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQYVLGIQI
Query: VRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
VRNRKNKTLAMSQTSYIDKMLSRYKM NSKKG+L YRYGIHLSK+QC K PQEVEDMSNIPYASAV SLMYVMLCTRP+ICY
Subjt: VRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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| A0A5D3CI71 Gag/pol protein | 1.4e-84 | 84.57 | Show/hide |
Query: GLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQY
G ++ + +KVCKLKKSIYGLKQ +RSWNIRFDTAIKSYGFEQN+DEPCVYKR IN+TVAFL++YVDDILL NDV HLTDIKEWLATQFQMKDL NAQY
Subjt: GLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQY
Query: VLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
VLGIQIVRN KNKTLAMSQTSYIDKMLSRYKMQNSKKG+L YRYGIHLSK+QC K PQEVEDMSNIPYASA+ SLMY MLCTR DICY
Subjt: VLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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| E2GK51 Gag/pol protein (Fragment) | 1.5e-80 | 80.32 | Show/hide |
Query: GLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQY
G + + +KVCKL+KSIYGLKQASRSWNIRFDTAIKSYGFEQN+DEPCVYK+I+NS VAFLI+YVDDILL NDV +LTD+K+WL TQFQMKDL AQY
Subjt: GLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQY
Query: VLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
+LGIQIVRNRKNKTLAMSQ SYIDK+LSRYKMQNSKKG L +R+GIHLSK+QC K PQEVEDM NIPY+SAV SLMY MLCTRPDICY
Subjt: VLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.8e-22 | 34.62 | Show/hide |
Query: VCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVY---KRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQYVLGIQIV
VCKL K+IYGLKQA+R W F+ A+K F + + C+Y K IN + ++++YVDD+++ D++ + + K +L +F+M DL ++ +GI+I
Subjt: VCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVY---KRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQYVLGIQIV
Query: RNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEV---EDMSNIPYASAVRSLMYVMLCTRPDI
+ + +SQ++Y+ K+LS++ M+N +S SKI E+ ++ N P S + LMY+MLCTRPD+
Subjt: RNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEV---EDMSNIPYASAVRSLMYVMLCTRPDI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.8e-36 | 43.72 | Show/hide |
Query: KNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVY-KRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQYVLGIQ
K VCKL KS+YGLKQA R W ++FD+ +KS + + +PCVY KR + L++YVDD+L+ D + +K L+ F MKDL AQ +LG++
Subjt: KNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVY-KRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQYVLGIQ
Query: IVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
IVR R ++ L +SQ YI+++L R+ M+N+K + LSKK C +E +M+ +PY+SAV SLMY M+CTRPDI +
Subjt: IVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.1e-09 | 29.21 | Show/hide |
Query: VCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQYVLGIQIVRNR
V +L +YGLKQA WN + +K GF ++ E +Y R + ++ VYVDD+L+ +K+ L + MKDL LG+ I
Subjt: VCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLRNAQYVLGIQIVRNR
Query: KNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
N + +S YI K S ++ K L + + SK ++D++ PY S V L++ RPDI Y
Subjt: KNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.8e-16 | 31.77 | Show/hide |
Query: SNQRGLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLR
S G + + VCKL+K++YGLKQA R+W + + + GF ++ + ++ ++ +++VYVDDIL+T ND + L + + L+ +F +KD
Subjt: SNQRGLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLR
Query: NAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
Y LGI+ R L +SQ YI +L+R M +K LS +K+ E Y V SL Y+ TRPDI Y
Subjt: NAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.4e-16 | 31.25 | Show/hide |
Query: SNQRGLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLR
S G + + VC+L+K+IYGLKQA R+W + T + + GF +I + ++ ++ +++VYVDDIL+T ND L + L+ +F +K+
Subjt: SNQRGLYKRVKNKKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNIDEPCVYKRIINSTVAFLIVYVDDILLTENDVSHLTDIKEWLATQFQMKDLR
Query: NAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
+ Y LGI+ R + L +SQ Y +L+R M +K L+ +K+P E Y V SL Y+ TRPD+ Y
Subjt: NAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGMLLYRYGIHLSKKQCSKIPQEVEDMSNIPYASAVRSLMYVMLCTRPDICY
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