CuGenDBv2

Gene ID	Cmc08g0219351
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr08:7471887..7474527
RNA-Seq Expression	Cmc08g0219351
Synteny	Cmc08g0219351
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043227 - membrane-bounded organelle (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037901.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.33

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIV+SFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------
        VSVDPAKIEAVTGWTRP+TVSEVRSFLGLAGYYRR VENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSF           
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------

Query:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFA KIW HYLYGEKIQIF DHK+LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT
        LSRKVSHSA LITRQAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCV  DSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR+VAEFVSRCLVCQQVKAPRQKPAGLLQPL IP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQTDGQT RLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFA NNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK
        ERR KLSPRFVGPFEILE+IGP+AYRLALPPSLSTVHDVFH+SMLRK
Subjt:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK

KAA0040699.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.64

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV

Query:  RSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSFGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
        RSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAS           GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
Subjt:  RSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSFGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI

Query:  WRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQL
        WRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQL
Subjt:  WRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQL

Query:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFV
        TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFV
Subjt:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFV

Query:  SRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA
        SRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA
Subjt:  SRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA

Query:  RFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRL
        RFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRL
Subjt:  RFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRL

Query:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH
        MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH
Subjt:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH

Query:  ISMLRK
        ISMLRK
Subjt:  ISMLRK

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.15

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSF           
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------

Query:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHK+LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVP DS VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKR+VAEFVSRCLVCQQVKAPRQKPAGLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMG+RLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK
        ERR KLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFH+SMLRK
Subjt:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.56

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSF           
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------

Query:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHK+LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVP DSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR+VAEFVS+CLVCQQVK PRQKPAGLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK
        ERR KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH+SMLRK
Subjt:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.68

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSF           
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------

Query:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHK+LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVP DSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKR+VAEFVS+CLVCQQVKAPRQKPAGLLQPLSIP+WKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK
        ERR KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH+SMLRK
Subjt:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T8G8 Reverse transcriptase

0.0e+00

92.33

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIV+SFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------
        VSVDPAKIEAVTGWTRP+TVSEVRSFLGLAGYYRR VENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSF           
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------

Query:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFA KIW HYLYGEKIQIF DHK+LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT
        LSRKVSHSA LITRQAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCV  DSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR+VAEFVSRCLVCQQVKAPRQKPAGLLQPL IP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQTDGQT RLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFA NNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK
        ERR KLSPRFVGPFEILE+IGP+AYRLALPPSLSTVHDVFH+SMLRK
Subjt:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK

A0A5A7THF3 Reverse transcriptase

0.0e+00

98.64

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV

Query:  RSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSFGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
        RSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAS           GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
Subjt:  RSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSFGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI

Query:  WRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQL
        WRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQL
Subjt:  WRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQL

Query:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFV
        TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFV
Subjt:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFV

Query:  SRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA
        SRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA
Subjt:  SRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA

Query:  RFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRL
        RFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRL
Subjt:  RFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRL

Query:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH
        MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH
Subjt:  MGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH

Query:  ISMLRK
        ISMLRK
Subjt:  ISMLRK

A0A5A7U330 Reverse transcriptase

0.0e+00

93.15

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSF           
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------

Query:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHK+LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVP DS VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKR+VAEFVSRCLVCQQVKAPRQKPAGLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMG+RLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK
        ERR KLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFH+SMLRK
Subjt:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK

A0A5A7UAA8 Reverse transcriptase

0.0e+00

92.56

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSF           
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------

Query:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHK+LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVP DSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKR+VAEFVS+CLVCQQVK PRQKPAGLLQPLSIP+WKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK
        ERR KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH+SMLRK
Subjt:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK

A0A5A7UP94 Pol protein

0.0e+00

92.68

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM                       VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRM-----------------------VSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGSGSF           
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSF-----------

Query:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF DHK+LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  -------GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVP DSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPLDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKR+VAEFVS+CLVCQQVKAPRQKPAGLLQPLSIP+WKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK
        ERR KLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFH+SMLRK
Subjt:  ERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.0e-124

31.48

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSG-----------SF
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+  VL   D S            + 
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSG-----------SF

Query:  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKTLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G V            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH+ L    T +    N R  RW   ++D++ EI Y P
Subjt:  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKTLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGF
        + +P D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   +  WE++SMDFIT LP +  G+
Subjt:  LCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHISMLRK
         +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FH+S L K
Subjt:  FLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHISMLRK

P0CT35 Transposon Tf2-2 polyprotein

1.0e-124

31.48

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSG-----------SF
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+  VL   D S            + 
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSG-----------SF

Query:  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKTLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G V            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH+ L    T +    N R  RW   ++D++ EI Y P
Subjt:  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKTLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGF
        + +P D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   +  WE++SMDFIT LP +  G+
Subjt:  LCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHISMLRK
         +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FH+S L K
Subjt:  FLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHISMLRK

P0CT36 Transposon Tf2-3 polyprotein

1.0e-124

31.48

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSG-----------SF
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+  VL   D S            + 
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSG-----------SF

Query:  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKTLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G V            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH+ L    T +    N R  RW   ++D++ EI Y P
Subjt:  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKTLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGF
        + +P D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   +  WE++SMDFIT LP +  G+
Subjt:  LCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHISMLRK
         +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FH+S L K
Subjt:  FLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHISMLRK

P0CT37 Transposon Tf2-4 polyprotein

1.0e-124

31.48

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSG-----------SF
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+  VL   D S            + 
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSG-----------SF

Query:  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKTLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G V            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH+ L    T +    N R  RW   ++D++ EI Y P
Subjt:  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKTLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGF
        + +P D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   +  WE++SMDFIT LP +  G+
Subjt:  LCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHISMLRK
         +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FH+S L K
Subjt:  FLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHISMLRK

P0CT41 Transposon Tf2-12 polyprotein

1.0e-124

31.48

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++                        V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR-----------------------MVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSG-----------SF
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+  VL   D S            + 
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSG-----------SF

Query:  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKTLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G V            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I  DH+ L    T +    N R  RW   ++D++ EI Y P
Subjt:  GKV------------VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFMDHKTLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGF
        + +P D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   +  WE++SMDFIT LP +  G+
Subjt:  LCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHISMLRK
         +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FH+S L K
Subjt:  FLKVAPMRGVLRFERREKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHISMLRK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

7.1e-20

45.92

Show/hide

Query:  VSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPD
        +++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T  VL +PD
Subjt:  VSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAA
GAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTAC
AGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCAGGATATCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTAC
GAGTTTATTGTAATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGA
CGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTA
AGATAGAGGCAGTTACCGGTTGGACCCGACCTTCCACTGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATA
GCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCATCGGTTCT
TACTGTACCTGATGGTTCTGGCAGTTTTGGTAAGGTGGTCGCTTATGCGTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAG
TGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCATGGATCATAAGACCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATG
AGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCGGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTC
GGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAATCACTATGCAGTTAGCCCAGTTGACGGTACAGC
CGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGAT
GGTGGACTTTTGTTCGAGAGACGCCTCTGTGTGCCGTTGGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTAC
GAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGAAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGC
AGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGAAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTCAGGGGTTTTACAGTG
ATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATT
GCATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCTCGAGGTTAGACTTTAGTACAGCTT
TCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTG
ATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGA
GCAGAGATTAATGGGCCCTGAGTTAGTTCAGTCTACCAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGA
GGCGGAAGGATCTCGAATTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAGGGAAAAACTGAGTCCTCGTTTTGTT
GGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTGGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCACGATGTGTTTCATATCTCTATGTTGAGGAAGTG
A

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHY
EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRI
ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTASVLTVPDGSGSFGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFMDHKTLKYFFTQKELNM
RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSD
GGLLFERRLCVPLDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKRKVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPKWKWENVSMDFITGLPRTLRGFTV
IWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHL
MEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERREKLSPRFV
GPFEILERIGPVAYRLALPPSLSTVHDVFHISMLRK

Cmc08g0219351 (gene) of Melon (Charmono) v1.1 genome