; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0220111 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0220111
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionvacuolar protein sorting-associated protein 55 homolog isoform X1
Genome locationCMiso1.1chr08:8214565..8218351
RNA-Seq ExpressionCmc08g0220111
SyntenyCmc08g0220111
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595172.1 Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.3e-6492.52Show/hide
Query:  MLTNVLYLRWLVLLAVWCTWMDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST
        MLTNVL L WLV   V  TWM+LI  AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGAST
Subjt:  MLTNVLYLRWLVLLAVWCTWMDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

KAG6604338.1 Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.0e-6493.1Show/hide
Query:  LTNVLYLRWLVLLAVWCTWMDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVG
        LTNVL L  +V  AV  TWMDLI AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVG
Subjt:  LTNVLYLRWLVLLAVWCTWMDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVG

Query:  SLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        SLAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  SLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022926166.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita moschata]1.5e-6392.41Show/hide
Query:  LTNVLYLRWLVLLAVWCTWMDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVG
        LTNVL L  +V  AV  TWMDLI AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVG
Subjt:  LTNVLYLRWLVLLAVWCTWMDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVG

Query:  SLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        SLAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLC HRVSLEDDW
Subjt:  SLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022963366.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita moschata]2.3e-6492.52Show/hide
Query:  MLTNVLYLRWLVLLAVWCTWMDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST
        MLTNVL L WLV   V  TWM+LI  AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGAST
Subjt:  MLTNVLYLRWLVLLAVWCTWMDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022972744.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita maxima]1.4e-6492.52Show/hide
Query:  MLTNVLYLRWLVLLAVWCTWMDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST
        MLTNVL L W+V   V  TWMDLI  AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGAST
Subjt:  MLTNVLYLRWLVLLAVWCTWMDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

TrEMBL top hitse value%identityAlignment
A0A0A0KHI6 Uncharacterized protein3.6e-63100Show/hide
Query:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
Subjt:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

A0A1S3CIW0 vacuolar protein sorting-associated protein 55 homolog isoform X13.6e-63100Show/hide
Query:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
        MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM
Subjt:  MDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAM

Query:  FIEFVSFFIFVCTVLCFHRVSLEDDW
        FIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  FIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1EE43 vacuolar protein sorting-associated protein 55 homolog isoform X17.3e-6492.41Show/hide
Query:  LTNVLYLRWLVLLAVWCTWMDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVG
        LTNVL L  +V  AV  TWMDLI AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVG
Subjt:  LTNVLYLRWLVLLAVWCTWMDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVG

Query:  SLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        SLAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLC HRVSLEDDW
Subjt:  SLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1HFY6 vacuolar protein sorting-associated protein 55 homolog isoform X11.1e-6492.52Show/hide
Query:  MLTNVLYLRWLVLLAVWCTWMDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST
        MLTNVL L WLV   V  TWM+LI  AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGAST
Subjt:  MLTNVLYLRWLVLLAVWCTWMDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1ICF8 vacuolar protein sorting-associated protein 55 homolog isoform X16.6e-6592.52Show/hide
Query:  MLTNVLYLRWLVLLAVWCTWMDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST
        MLTNVL L W+V   V  TWMDLI  AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGAST
Subjt:  MLTNVLYLRWLVLLAVWCTWMDLIF-AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGAST

Query:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  VGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

SwissProt top hitse value%identityAlignment
P47111 Vacuolar protein sorting-associated protein 552.8e-0426.55Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGS---TQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEF
        +  L+   +   LL IL+CAL++N++PL   L+++L P+P   F  G+   T   +S         A FLTG      +A+P++  H  +I   +  +  
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGS---TQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEF

Query:  VSFFIFVCTVLCF
        +   I   +++ F
Subjt:  VSFFIFVCTVLCF

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog5.2e-2755.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

Q9UUH1 Vacuolar protein sorting-associated protein 559.6e-0525.21Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQF-LISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS
        + GL+ + +   +L IL+CAL+ NW+PLL  + ++L P+P L     ST    +  +    +   +F  GA+     A+PI+  +  +I T A  +  V 
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQF-LISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVS

Query:  FFIFVCTVLCFHRVSLEDD
          I    +  + +  ++ +
Subjt:  FFIFVCTVLCFHRVSLEDD

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein3.7e-2855.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein3.7e-2855.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein3.7e-2855.56Show/hide
Query:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF
        +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+
Subjt:  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSF

Query:  FIFVCTVL
         +F+  +L
Subjt:  FIFVCTVL

AT3G11530.1 Vacuolar protein sorting 55 (VPS55) family protein1.8e-5487.61Show/hide
Query:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT
        MFSSSILLQILACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFLISRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CT
Subjt:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT

Query:  VLCFHRVSLEDDW
        V+CFHR SL+DDW
Subjt:  VLCFHRVSLEDDW

AT3G11530.2 Vacuolar protein sorting 55 (VPS55) family protein1.8e-5487.61Show/hide
Query:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT
        MFSSSILLQILACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFLISRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CT
Subjt:  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCT

Query:  VLCFHRVSLEDDW
        V+CFHR SL+DDW
Subjt:  VLCFHRVSLEDDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAACTAATGTTCTATATCTTCGTTGGCTGGTGCTTCTTGCTGTTTGGTGTACATGGATGGATCTCATATTTGCAGTGTTAGCTGGGCTTGCGTTTATGTTTTCATC
TAGCATCTTGCTACAGATACTGGCTTGTGCACTATACAACAATTGGTGGCCTTTGTTATCAGCTTTGATGTACGTGCTTGTTCCAATGCCTTGTTTATTTTTTGGAGGTG
GGTCCACACAGTTTCTGATTAGCCGAGATGGTGGAGGATGGATAGGTGCTGCTAAGTTCTTGACGGGCGCCTCAACTGTCGGGAGTTTGGCAATTCCTATTATCCTGAGG
CATGCTCATATGATCGACACAGGAGCCATGTTCATAGAATTCGTTTCCTTCTTCATATTTGTTTGCACTGTGTTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTG
A
mRNA sequenceShow/hide mRNA sequence
GTTTCCCTTCTAAACCATAAAAACATCTATTGGTAATCAAAGTGTAAAGCGTGCCACATTCTATTCATAAGCGGCCTTCAAATATACCAAAAGTATCCCAAAGAAAGGGA
AAGAAAATTATCCGGTCACAGCTTAAATCTTGCCTTCTTCGTCGCGATTAAGGGCAAGAATCATCACGCATCACTGCGCCAGGAACTTCAAGCTTGTTATAATGGCGATG
ACATTGGAAGGTACAGTTTCCTAATTCCCCTCATAATTTTACTCCACTCAATTATTTTGATGGGTCTAATGTTCTTGTCGATTTTGGGGACGAGCGCTTTAGATTTTCTA
TGTAAACATGTGGCTTAGCTTAGTTTTATACCAGGTTTTCGAATGATGGGTTTTTCGTTGACTAACAATTCAGTTGTTCCCAGCTATTACTAAACGAGGGATTTGAGGGA
ATAACAGTTTTAGTTTATTGGGCAATTGTTCGGGATTTAATCTTTTATCTCCTTTCTGCATGTAAGAAAACGTCGAGGTTGGTCGAATTTGAATGAAGTTGTGGACATGG
GGAAAATCGTGTCTGTATAAGAAAGGCTGGTCTGGGAGAAATTTTCATTGATCTCAATTTTTTTGTTGAATTTCCATTGGTGTTCTTAGTTTTTGTTAAGATGGGGGGAG
AAGTGGCGTCTGTTTCGTTTGCATACTTTATTCCTACATAGATAGTTACAAGATATATGGAGCAAGAAAATGAAAACACCCTTTATATAGGGTATAGGATTGAAAATGAA
TCCATCAGCCTGAATTGAGTTTATCAGAGTGCAAAGCGTGAGTCTGTCTGTGAAAGTAGATAAACTTATATATAATAAGCTGCAAAATTAGATCAATTTGGTTAATTTGT
TGCTTAATTTGGCTTTTAGATTTTTCTTTCGTTTAATGTTAACTAATGTTCTATATCTTCGTTGGCTGGTGCTTCTTGCTGTTTGGTGTACATGGATGGATCTCATATTT
GCAGTGTTAGCTGGGCTTGCGTTTATGTTTTCATCTAGCATCTTGCTACAGATACTGGCTTGTGCACTATACAACAATTGGTGGCCTTTGTTATCAGCTTTGATGTACGT
GCTTGTTCCAATGCCTTGTTTATTTTTTGGAGGTGGGTCCACACAGTTTCTGATTAGCCGAGATGGTGGAGGATGGATAGGTGCTGCTAAGTTCTTGACGGGCGCCTCAA
CTGTCGGGAGTTTGGCAATTCCTATTATCCTGAGGCATGCTCATATGATCGACACAGGAGCCATGTTCATAGAATTCGTTTCCTTCTTCATATTTGTTTGCACTGTGTTG
TGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTGATAATTCCAGACCAATATAGTGAAGCAGATTTGAGTGCCGATGATTATAAAACCTTCCTTTGTTAAATTTTAATC
CTCGTCTTTTGAACACAATCGACACGAGACATTGTATAACAAGAAGAAACTTGCCCAGGAGAAAAGAAACCGAGCTCGAAGTTTCTCATATGTAAATCAATCTAATGTAT
GATAATAGTTATCTTTTTTAACCCCCTTCTTTTCTTGTTATGTCCAACGAAATTTGTGTTAAGTGAAAGGCTTAGGCAATACTAATTTTAAGAGTATATTCTGTGGTTTG
AACTTTCAAAACCTCTATTTATTTTGATTCCTTTCACATGTTTATTTGTTTTGAAGTTTCAATAAATAACTATTTTATGGTTCTT
Protein sequenceShow/hide protein sequence
MLTNVLYLRWLVLLAVWCTWMDLIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILR
HAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW