; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0220901 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0220901
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase
Genome locationCMiso1.1chr08:8759605..8760213
RNA-Seq ExpressionCmc08g0220901
SyntenyCmc08g0220901
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038926.1 integrase [Cucumis melo var. makuwa]2.9e-10595.54Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        MK EFEMSDM LIHYFLGIEVNQNEGEIVISQQKYAHDLLKK RMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        RFMTNP+RSHW AGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKS S YVFSMGS VFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Query:  LR
        LR
Subjt:  LR

KAA0039947.1 integrase [Cucumis melo var. makuwa]2.9e-10595.54Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        MK EFEMSDM LIHYFLGIEVNQNEGEIVISQQKYAHDLLKK RMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        RFMTNP+RSHW AGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKS S YVFSMGS VFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Query:  LR
        LR
Subjt:  LR

KAA0050825.1 integrase [Cucumis melo var. makuwa]9.9e-10695.54Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        MK EFEMSDM LIHYFLGIEVNQNEGEIVISQQKYAHDLLKK RMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        RFMTNP+RSHW AGKRVLRYILGTINFGIYYKKVSESV+FGFCD+DWGGNVDDHKS S YVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Query:  LR
        LR
Subjt:  LR

KAA0060377.1 integrase [Cucumis melo var. makuwa]2.9e-10595.54Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        MK EFEMSDM LIHYFLGIEVNQNEGEIVISQQKYAHDLLKK RMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        RFMTNP+RSHW AGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKS S YVFSMGS VFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Query:  LR
        LR
Subjt:  LR

TYJ95504.1 integrase [Cucumis melo var. makuwa]2.9e-10595.54Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        MK EFEMSDM LIHYFLGIEVNQNEGEIVISQQKYAHDLLKK RMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        RFMTNP+RSHW AGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKS S YVFSMGS VFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Query:  LR
        LR
Subjt:  LR

TrEMBL top hitse value%identityAlignment
A0A5A7UB30 Integrase4.8e-10695.54Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        MK EFEMSDM LIHYFLGIEVNQNEGEIVISQQKYAHDLLKK RMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        RFMTNP+RSHW AGKRVLRYILGTINFGIYYKKVSESV+FGFCD+DWGGNVDDHKS S YVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Query:  LR
        LR
Subjt:  LR

A0A5D3BQ81 Integrase1.4e-10595.54Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        MK EFEMSDM LIHYFLGIEVNQNEGEIVISQQKYAHDLLKK RMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        RFMTNP+RSHW AGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKS S YVFSMGS VFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Query:  LR
        LR
Subjt:  LR

A0A5D3CLV1 Integrase1.4e-10595.54Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        MK EFEMSDM LIHYFLGIEVNQNEGEIVISQQKYAHDLLKK RMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        RFMTNP+RSHW AGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKS S YVFSMGS VFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Query:  LR
        LR
Subjt:  LR

A0A5D3D538 Integrase1.4e-10595.54Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        MK EFEMSDM LIHYFLGIEVNQNEGEIVISQQKYAHDLLKK RMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        RFMTNP+RSHW AGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKS S YVFSMGS VFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Query:  LR
        LR
Subjt:  LR

A0A5D3E3T2 Integrase1.4e-10595.54Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        MK EFEMSDM LIHYFLGIEVNQNEGEIVISQQKYAHDLLKK RMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        RFMTNP+RSHW AGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKS S YVFSMGS VFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Query:  LR
        LR
Subjt:  LR

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.0e-3238.94Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDA--NLKLCKDDIGEAVDPSLYRSLVGSLMY-LTATRPDILFAVS
        + ++F M+D++ I +F+GI +   E +I +SQ  Y   +L K  MEN +  +TP+ +  N +L   D  +   P   RSL+G LMY +  TRPD+  AV+
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDA--NLKLCKDDIGEAVDPSLYRSLVGSLMY-LTATRPDILFAVS

Query:  MLSRFMTNPERSHWGAGKRVLRYILGTINFGIYYKK--VSESVLFGFCDSDWGGNVDDHKSISAYVFSM-GSDVFSWTSKKQSVVALSTTEAEYISLAAA
        +LSR+ +      W   KRVLRY+ GTI+  + +KK    E+ + G+ DSDW G+  D KS + Y+F M   ++  W +K+Q+ VA S+TEAEY++L  A
Subjt:  MLSRFMTNPERSHWGAGKRVLRYILGTINFGIYYKK--VSESVLFGFCDSDWGGNVDDHKSISAYVFSM-GSDVFSWTSKKQSVVALSTTEAEYISLAAA

Query:  GCQALWLR
          +ALWL+
Subjt:  GCQALWLR

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.8e-3438.39Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEV--NQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPS------LYRSLVGSLMY-LTATRPD
        + K F+M D+      LG+++   +   ++ +SQ+KY   +L++  M+NA P +TP+  +LKL K      V+         Y S VGSLMY +  TRPD
Subjt:  MKKEFEMSDMSLIHYFLGIEV--NQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPS------LYRSLVGSLMY-LTATRPD

Query:  ILFAVSMLSRFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISL
        I  AV ++SRF+ NP + HW A K +LRY+ GT    + +   S+ +L G+ D+D  G++D+ KS + Y+F+      SW SK Q  VALSTTEAEYI+ 
Subjt:  ILFAVSMLSRFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISL

Query:  AAAGCQALWLR
           G + +WL+
Subjt:  AAAGCQALWLR

P92519 Uncharacterized mitochondrial protein AtMg008101.2e-3437.5Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        +   F M D+  +HYFLGI++  +   + +SQ KYA  +L    M +  P +TP+   L        +  DPS +RS+VG+L YLT TRPDI +AV+++ 
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        + M  P  + +   KRVLRY+ GTI  G+Y  K S+  +  FCDSDW G     +S + +   +G ++ SW++K+Q  V+ S+TE EY +LA    +  W
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.4e-3842.29Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        + + F + D   +HYFLGIE  +    + +SQ++Y  DLL +  M  A P  TPM  + KL      +  DP+ YR +VGSL YL  TRPDI +AV+ LS
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        +FM  P   H  A KR+LRY+ GT N GI+ KK +   L  + D+DW G+ DD+ S + Y+  +G    SW+SKKQ  V  S+TEAEY S+A    +  W
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Query:  L
        +
Subjt:  L

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.1e-3841.29Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        + + F + +   +HYFLGIE  +    + +SQ++Y  DLL +  M  A P  TPM  + KL      +  DP+ YR +VGSL YL  TRPD+ +AV+ LS
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        ++M  P   HW A KRVLRY+ GT + GI+ KK +   L  + D+DW G+ DD+ S + Y+  +G    SW+SKKQ  V  S+TEAEY S+A    +  W
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Query:  L
        +
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.2e-3438.31Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        +K  F++ D+  + YFLG+E+ ++   I I Q+KYA DLL +  +    P + PMD ++       G+ VD   YR L+G LMYL  TR DI FAV+ LS
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        +F   P  +H  A  ++L YI GT+  G++Y   +E  L  F D+ +    D  +S + Y   +G+ + SW SKKQ VV+ S+ EAEY +L+ A  + +W
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW

Query:  L
        L
Subjt:  L

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.5e-1139.74Show/hide
Query:  MYLTATRPDILFAVSMLSRFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAY
        MYLT TRPD+ FAV+ LS+F +    +   A  +VL Y+ GT+  G++Y   S+  L  F DSDW    D  +S++ +
Subjt:  MYLTATRPDILFAVSMLSRFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAY

ATMG00810.1 DNA/RNA polymerases superfamily protein8.8e-3637.5Show/hide
Query:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS
        +   F M D+  +HYFLGI++  +   + +SQ KYA  +L    M +  P +TP+   L        +  DPS +RS+VG+L YLT TRPDI +AV+++ 
Subjt:  MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLS

Query:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW
        + M  P  + +   KRVLRY+ GTI  G+Y  K S+  +  FCDSDW G     +S + +   +G ++ SW++K+Q  V+ S+TE EY +LA    +  W
Subjt:  RFMTNPERSHWGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGGAATTTGAGATGAGTGATATGAGTCTCATCCACTACTTTCTCGGAATTGAAGTTAATCAAAATGAAGGAGAAATTGTCATTTCACAACAAAAGTATGCTCA
TGATTTACTAAAAAAAATTCGGATGGAAAATGCTTCACCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTT
TGTATCGAAGCTTAGTTGGAAGCTTAATGTACTTGACAGCAACAAGACCTGATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCGGAAAGAAGTCAT
TGGGGAGCAGGTAAAAGAGTTCTTCGTTACATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACTG
GGGTGGTAATGTGGATGATCATAAAAGTATATCTGCTTATGTTTTTAGTATGGGTTCAGATGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAA
CCGAAGCAGAATATATCTCGTTAGCTGCAGCTGGATGCCAAGCTTTATGGCTTCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAGGAATTTGAGATGAGTGATATGAGTCTCATCCACTACTTTCTCGGAATTGAAGTTAATCAAAATGAAGGAGAAATTGTCATTTCACAACAAAAGTATGCTCA
TGATTTACTAAAAAAAATTCGGATGGAAAATGCTTCACCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTT
TGTATCGAAGCTTAGTTGGAAGCTTAATGTACTTGACAGCAACAAGACCTGATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCGGAAAGAAGTCAT
TGGGGAGCAGGTAAAAGAGTTCTTCGTTACATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACTG
GGGTGGTAATGTGGATGATCATAAAAGTATATCTGCTTATGTTTTTAGTATGGGTTCAGATGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAA
CCGAAGCAGAATATATCTCGTTAGCTGCAGCTGGATGCCAAGCTTTATGGCTTCGGTAG
Protein sequenceShow/hide protein sequence
MKKEFEMSDMSLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKIRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPERSH
WGAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSISAYVFSMGSDVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLR