| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0063818.1 RNA polymerase sigma factor sigF [Cucumis melo var. makuwa] | 5.6e-292 | 99.81 | Show/hide |
Query: VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
Subjt: VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
Query: SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQ+RRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
Subjt: SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
Query: KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
Subjt: KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
Query: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
Subjt: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
Query: KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
Subjt: KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
Query: YKLKRCCNSQGLGAYADLLT
YKLKRCCNSQGLGAYADLLT
Subjt: YKLKRCCNSQGLGAYADLLT
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| TYK07306.1 RNA polymerase sigma factor sigF [Cucumis melo var. makuwa] | 1.4e-290 | 99.81 | Show/hide |
Query: MFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESY
MFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESY
Subjt: MFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESY
Query: NAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKF
NAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQ+RRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKF
Subjt: NAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKF
Query: DPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGR
DPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGR
Subjt: DPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGR
Query: GLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKL
GLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKL
Subjt: GLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKL
Query: MFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYK
MFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYK
Subjt: MFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYK
Query: LKRCCNSQGLGAYADLLT
LKRCCNSQGLGAYADLLT
Subjt: LKRCCNSQGLGAYADLLT
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| XP_016902883.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Cucumis melo] | 1.9e-292 | 100 | Show/hide |
Query: VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
Subjt: VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
Query: SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
Subjt: SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
Query: KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
Subjt: KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
Query: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
Subjt: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
Query: KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
Subjt: KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
Query: YKLKRCCNSQGLGAYADLLT
YKLKRCCNSQGLGAYADLLT
Subjt: YKLKRCCNSQGLGAYADLLT
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| XP_016902885.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Cucumis melo] | 1.9e-292 | 100 | Show/hide |
Query: VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
Subjt: VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
Query: SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
Subjt: SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
Query: KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
Subjt: KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
Query: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
Subjt: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
Query: KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
Subjt: KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
Query: YKLKRCCNSQGLGAYADLLT
YKLKRCCNSQGLGAYADLLT
Subjt: YKLKRCCNSQGLGAYADLLT
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| XP_031742499.1 RNA polymerase sigma factor sigF, chloroplastic [Cucumis sativus] | 3.3e-292 | 93.77 | Show/hide |
Query: MEAGLNLLSSSSPFISRCLPRNFLPPSCSS----SSSSSSSSVYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEG
MEAGLNLLSSSSPFISRC PR+FL PSCSS SSSSSSSSVYMF EQASPARYFSTSFLSQEQHHECRPQSQILKDDR+SQMTL+RRLIERSVPIDEG
Subjt: MEAGLNLLSSSSPFISRCLPRNFLPPSCSS----SSSSSSSSVYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEG
Query: SRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEG
SR DHDHLIWELKHQAVEWP LLSSWP +QMEEYKISS EKESYNA GEMLVKDEPENVIALAKKALSASKQAALLVDE+ELVGTSLDYSSLDDSLSKEG
Subjt: SRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEG
Query: RTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVE
RTVRSTRLQDRRSKKRKVPKHVTTI E SNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQF REPTLVE
Subjt: RTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVE
Query: WAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLP
WAEALGITCQ LQSQLH F+TSREKLINANLRMVVHIAKQY GRGLSLHDLLQ GSLGLMKSVEKFKPQAGCRF SYAYWWIRHSI KAIFQHSRTIRLP
Subjt: WAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLP
Query: ENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSP
ENVYALLGKVTEAKNY VRAGNYKPSKEELAA VGITVER DKLMFMSRIPRSLQQPVWADQ+TT+QEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Subjt: ENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Query: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
KERRIIRLRFGIEDG+EKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
Subjt: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KEQ6 RNA polymerase sigma factor | 1.6e-292 | 93.77 | Show/hide |
Query: MEAGLNLLSSSSPFISRCLPRNFLPPSCSS----SSSSSSSSVYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEG
MEAGLNLLSSSSPFISRC PR+FL PSCSS SSSSSSSSVYMF EQASPARYFSTSFLSQEQHHECRPQSQILKDDR+SQMTL+RRLIERSVPIDEG
Subjt: MEAGLNLLSSSSPFISRCLPRNFLPPSCSS----SSSSSSSSVYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEG
Query: SRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEG
SR DHDHLIWELKHQAVEWP LLSSWP +QMEEYKISS EKESYNA GEMLVKDEPENVIALAKKALSASKQAALLVDE+ELVGTSLDYSSLDDSLSKEG
Subjt: SRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEG
Query: RTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVE
RTVRSTRLQDRRSKKRKVPKHVTTI E SNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQF REPTLVE
Subjt: RTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVE
Query: WAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLP
WAEALGITCQ LQSQLH F+TSREKLINANLRMVVHIAKQY GRGLSLHDLLQ GSLGLMKSVEKFKPQAGCRF SYAYWWIRHSI KAIFQHSRTIRLP
Subjt: WAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLP
Query: ENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSP
ENVYALLGKVTEAKNY VRAGNYKPSKEELAA VGITVER DKLMFMSRIPRSLQQPVWADQ+TT+QEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Subjt: ENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Query: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
KERRIIRLRFGIEDG+EKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
Subjt: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| A0A1S4E3S8 RNA polymerase sigma factor sigF, chloroplastic isoform X1 | 9.2e-293 | 100 | Show/hide |
Query: VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
Subjt: VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
Query: SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
Subjt: SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
Query: KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
Subjt: KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
Query: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
Subjt: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
Query: KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
Subjt: KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
Query: YKLKRCCNSQGLGAYADLLT
YKLKRCCNSQGLGAYADLLT
Subjt: YKLKRCCNSQGLGAYADLLT
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| A0A1S4E4I4 RNA polymerase sigma factor sigF, chloroplastic isoform X2 | 9.2e-293 | 100 | Show/hide |
Query: VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
Subjt: VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
Query: SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
Subjt: SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
Query: KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
Subjt: KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
Query: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
Subjt: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
Query: KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
Subjt: KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
Query: YKLKRCCNSQGLGAYADLLT
YKLKRCCNSQGLGAYADLLT
Subjt: YKLKRCCNSQGLGAYADLLT
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| A0A5A7V893 RNA polymerase sigma factor sigF | 2.7e-292 | 99.81 | Show/hide |
Query: VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
Subjt: VYMFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKE
Query: SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQ+RRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
Subjt: SYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSE
Query: KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
Subjt: KFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYL
Query: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
Subjt: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLD
Query: KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
Subjt: KLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRAL
Query: YKLKRCCNSQGLGAYADLLT
YKLKRCCNSQGLGAYADLLT
Subjt: YKLKRCCNSQGLGAYADLLT
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| A0A5D3CAF4 RNA polymerase sigma factor | 6.6e-291 | 99.81 | Show/hide |
Query: MFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESY
MFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESY
Subjt: MFSEQASPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIERSVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESY
Query: NAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKF
NAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQ+RRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKF
Subjt: NAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKF
Query: DPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGR
DPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGR
Subjt: DPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGR
Query: GLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKL
GLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKL
Subjt: GLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKL
Query: MFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYK
MFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYK
Subjt: MFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYK
Query: LKRCCNSQGLGAYADLLT
LKRCCNSQGLGAYADLLT
Subjt: LKRCCNSQGLGAYADLLT
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 1.4e-64 | 34.84 | Show/hide |
Query: EKESYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRK-VPKHVTTIHETSNFRGKDSRR
EKE +G + V D N I K SAS + ++ +L + L + VRSTR +R++++ K + K + I +R
Subjt: EKESYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRK-VPKHVTTIHETSNFRGKDSRR
Query: KTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIA
+++ D NDPLR + KLLT +EE +L IQDL+ L+ ++ +L + GR+PT +WA A G+ + L+ ++H ++K+I +N+R+V+ IA
Subjt: KTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIA
Query: KQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITV
K Y G G++L DL+QEG GL++ EKF G +F++YA+WWI+ ++ K++ SR IRLP ++ +V EA+ L P EE+A G+++
Subjt: KQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITV
Query: ERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLE
+RL ++ + PRSL Q + +Q+ E+ AD E T + + +E MR+ + +L L +E+++IR RFG+EDG+ KTL EIG M G+S+ERVRQ+E
Subjt: ERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLE
Query: NRALYKLKRCCNSQGLGAY
+ A KLK + L Y
Subjt: NRALYKLKRCCNSQGLGAY
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| P26683 RNA polymerase sigma factor SigA | 1.0e-62 | 39.62 | Show/hide |
Query: SRRKT--SEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRM
SRR+T +K D +RL+L +LL A EE +L +I DL+ L+ V+ +L + R+P EWAEA+ + + +LH R +++K++ +NLR+
Subjt: SRRKT--SEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRM
Query: VVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAH
VV IAK+Y+ RGLS DL+QEGSLGL+++ EKF + G +F++YA WWIR +I +AI SRTIRLP ++Y + ++ + L + KP++EE+A
Subjt: VVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAH
Query: VGITVERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKER
+ +T+E+L + +++P SL+ P+ ++D+ + +S+ +TP+ V + L+R + +L LSP+ER ++RLR+G++DG+ KTL EIG +F +++ER
Subjt: VGITVERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKER
Query: VRQLENRALYKLK
+RQ+E +AL KL+
Subjt: VRQLENRALYKLK
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| P38023 RNA polymerase sigma factor SigA1 | 2.1e-60 | 36.55 | Show/hide |
Query: ESELVGTSLDYSSLDDSLS-KEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFD-------------PNDPLRLFLWGPETKKLLT
E E G + LD +L E + RS+ R+ V + TTI T++ D E D D +RL+L +LL
Subjt: ESELVGTSLDYSSLDDSLS-KEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFD-------------PNDPLRLFLWGPETKKLLT
Query: AQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVE
A EE +L QI DL+ L+ ++ +L Q R P+ EWA A+ + + +L R +++K++ +NLR+VV IAK+Y+ RGLS DL+QEGSLGL+++ E
Subjt: AQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVE
Query: KFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIPRSLQQPVWADQDT
KF + G +F++YA WWIR +I +AI SRTIRLP ++Y + ++ + L + KP++EE+A + +T+E+L + +++P SL+ P+ ++D+
Subjt: KFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIPRSLQQPVWADQDT
Query: TYQE-ITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLK
+ I AD E TP+ V + L+R + +LS LSP+ER ++RLR+G++DG+ KTL EIG +F +++ER+RQ+E +AL KL+
Subjt: TYQE-ITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLK
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| Q31ME3 RNA polymerase sigma factor SigA2 | 2.7e-55 | 38.87 | Show/hide |
Query: TSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAK
+S ++ P D +R +L +LLTA+EE Q+Q LM+L + + +L+ + G EP+ EWA A+ + + L Q+ + ++ K+I ANLR+VV IAK
Subjt: TSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAK
Query: QYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVE
+Y R + DL+QEG+LGL + VEKF P G +F++YAYWWIR +I +AI Q SRTIRLP ++ L K+ + + L + + ELA + + +E
Subjt: QYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVE
Query: RLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLEN
++ + + M+R P SL V QDT QE+ D E +P VE+E +RR +RNL++ L+P+++ +I LR+G+++G +L ++G +S+ERVR+LE
Subjt: RLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLEN
Query: RALYKLKRCCNSQGLGAYA
+A+ L+R S+ L YA
Subjt: RALYKLKRCCNSQGLGAYA
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| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 3.0e-147 | 54.1 | Show/hide |
Query: MEAGLNLLSSSSPFISRCLPRNFLPPSCSSSSSSSSSSVYMFSEQA-----------SPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIER
MEA NL+SSS F ++ + SS SS SSV M +Q S +R+F S LSQE E RP S L+DDRTSQ+TL+RR +
Subjt: MEAGLNLLSSSSPFISRCLPRNFLPPSCSSSSSSSSSSVYMFSEQA-----------SPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIER
Query: SVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESEL-----VGTSLD
V E + + +L H W L+S S E K+ AV L E +V+ALA+KALSASKQAALLVD++E + SL
Subjt: SVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESEL-----VGTSLD
Query: YSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKL
SS SL ++G VRS R +RR+K R+ PK E + +++K + D +D L+LFLWGPETK+LLTA+EE++LI IQ L+ L+ VK KL
Subjt: YSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKL
Query: QSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINK
+SQ G EPT+ EWAEA+GI+ L+S +H R+SREKLI ANLR+VVHIAKQY RGL+ DLLQEGS+GLMKSVEKFKPQ+GCRFA+YAYWWIR SI K
Subjt: QSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINK
Query: AIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMR
+IFQ+SRTIRLPENVY LLGKV+EA+ V+ GNY+PSKEELA HVG++ E+LDKL++ +R P S+QQP+W+DQDTT+QEIT DS ++TP +SV ++LMR
Subjt: AIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMR
Query: RHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL
H+RNLL++LSPKERRII+LRFGI+ GK+++L EIG ++GLSKERVRQLE+RALY+LK+ NS GL AYADLL
Subjt: RHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.0e-65 | 34.84 | Show/hide |
Query: EKESYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRK-VPKHVTTIHETSNFRGKDSRR
EKE +G + V D N I K SAS + ++ +L + L + VRSTR +R++++ K + K + I +R
Subjt: EKESYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRK-VPKHVTTIHETSNFRGKDSRR
Query: KTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIA
+++ D NDPLR + KLLT +EE +L IQDL+ L+ ++ +L + GR+PT +WA A G+ + L+ ++H ++K+I +N+R+V+ IA
Subjt: KTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIA
Query: KQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITV
K Y G G++L DL+QEG GL++ EKF G +F++YA+WWI+ ++ K++ SR IRLP ++ +V EA+ L P EE+A G+++
Subjt: KQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITV
Query: ERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLE
+RL ++ + PRSL Q + +Q+ E+ AD E T + + +E MR+ + +L L +E+++IR RFG+EDG+ KTL EIG M G+S+ERVRQ+E
Subjt: ERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLE
Query: NRALYKLKRCCNSQGLGAY
+ A KLK + L Y
Subjt: NRALYKLKRCCNSQGLGAY
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| AT1G64860.1 sigma factor A | 4.0e-30 | 27.59 | Show/hide |
Query: EKESYNAVGEMLVKDEPENVIALAKKALSASKQAAL-LVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRR
E+E Y+ + L+ E ++ L K L S + SE G ++ G + R R+ +KK+ HV + + S+ GK
Subjt: EKESYNAVGEMLVKDEPENVIALAKKALSASKQAAL-LVDESELVGTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRR
Query: KTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIA
+R ++ G ++ +L+ E L +I+ + LD+ K++L+ + G EP+ + A +L I+ +LQ+ L +REKL +N+R+V+ IA
Subjt: KTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIA
Query: KQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITV
++Y G + DL+Q G +GL++ +EKF G R ++Y YWWIR +++A+ +SRT+RLP +++ LG + AK L G PS + +A + ++
Subjt: KQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITV
Query: ERLDKLMFMSRIPRSLQQPVWADQD----TTYQEITADSEVD-TPDVSVERELMRRHIRNLLS-ILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKE
+++ SL + + + T+ AD+ ++ P + ++ + L+S L +E+ IIRL +G+ D + T +I GLS+E
Subjt: ERLDKLMFMSRIPRSLQQPVWADQD----TTYQEITADSEVD-TPDVSVERELMRRHIRNLLS-ILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKE
Query: RVRQLENRALYKLKRCCNSQGLGA
RVRQ+ AL KLK + + A
Subjt: RVRQLENRALYKLKRCCNSQGLGA
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| AT2G36990.1 RNApolymerase sigma-subunit F | 2.1e-148 | 54.1 | Show/hide |
Query: MEAGLNLLSSSSPFISRCLPRNFLPPSCSSSSSSSSSSVYMFSEQA-----------SPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIER
MEA NL+SSS F ++ + SS SS SSV M +Q S +R+F S LSQE E RP S L+DDRTSQ+TL+RR +
Subjt: MEAGLNLLSSSSPFISRCLPRNFLPPSCSSSSSSSSSSVYMFSEQA-----------SPARYFSTSFLSQEQHHECRPQSQILKDDRTSQMTLDRRLIER
Query: SVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESEL-----VGTSLD
V E + + +L H W L+S S E K+ AV L E +V+ALA+KALSASKQAALLVD++E + SL
Subjt: SVPIDEGSRSDHDHLIWELKHQAVEWPDLLSSWPSLQMEEYKISSFEKESYNAVGEMLVKDEPENVIALAKKALSASKQAALLVDESEL-----VGTSLD
Query: YSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKL
SS SL ++G VRS R +RR+K R+ PK E + +++K + D +D L+LFLWGPETK+LLTA+EE++LI IQ L+ L+ VK KL
Subjt: YSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIHETSNFRGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESDLIVQIQDLMILDNVKAKL
Query: QSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINK
+SQ G EPT+ EWAEA+GI+ L+S +H R+SREKLI ANLR+VVHIAKQY RGL+ DLLQEGS+GLMKSVEKFKPQ+GCRFA+YAYWWIR SI K
Subjt: QSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFASYAYWWIRHSINK
Query: AIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMR
+IFQ+SRTIRLPENVY LLGKV+EA+ V+ GNY+PSKEELA HVG++ E+LDKL++ +R P S+QQP+W+DQDTT+QEIT DS ++TP +SV ++LMR
Subjt: AIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIPRSLQQPVWADQDTTYQEITADSEVDTPDVSVERELMR
Query: RHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL
H+RNLL++LSPKERRII+LRFGI+ GK+++L EIG ++GLSKERVRQLE+RALY+LK+ NS GL AYADLL
Subjt: RHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL
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| AT3G53920.1 RNApolymerase sigma-subunit C | 1.2e-37 | 27.42 | Show/hide |
Query: KKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEGSLGL
K+ ++ E+++ ++ + ++ ++ +L+ + G+ +L WA A G+ + L LH R++L+ + +V+ +A+ Y G G++ DL+Q G +G+
Subjt: KKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEGSLGL
Query: MKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYK-PSKEELAAHVGITVERLDKLMFMSRIPRSLQQPV
++ E+F G +F++Y +WIR S++ + +H+R + +P ++ + + +A+ L + K + EE+A G +V+++ ++ S+ + V
Subjt: MKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYK-PSKEELAAHVGITVERLDKLMFMSRIPRSLQQPV
Query: WADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY
T + E T D+ +++P+ +V R+ RR I +LL L P+E++++ LR+G++D + K+L EIG + +SKE +R++E RA+ KL+ N++ L Y
Subjt: WADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY
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| AT5G13730.1 sigma factor 4 | 1.3e-41 | 34.44 | Show/hide |
Query: GPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEG
G L+ EE L + +++ L+N+ ++ E V A G + L + +REK+ R+VV IA Y G+GL+L DL+QEG
Subjt: GPETKKLLTAQEESDLIVQIQDLMILDNVKAKLQSQFGREPTLVEWAEALGITCQQLQSQLHSFRTSREKLINANLRMVVHIAKQYLGRGLSLHDLLQEG
Query: SLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIPRSLQ
S+GL++ E+F P G + ++Y YWWI+ +I +AI SR ++LP +++ L KV EA N L R +PS EE+A H+ + V + + SR P SL
Subjt: SLGLMKSVEKFKPQAGCRFASYAYWWIRHSINKAIFQHSRTIRLPENVYALLGKVTEAKNYLVRAGNYKPSKEELAAHVGITVERLDKLMFMSRIPRSLQ
Query: QPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLG
+ + T QEI + P+ V+RE M+ I LL L+ +E R++ L FG+ + EIG LS+ERVRQ+ AL KL+ N L
Subjt: QPVWADQDTTYQEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLG
Query: AY
Y
Subjt: AY
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