CuGenDBv2

Gene ID	Cmc08g0221521
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr08:9333459..9335776
RNA-Seq Expression	Cmc08g0221521
Synteny	Cmc08g0221521
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043227 - membrane-bounded organelle (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.82

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEAGQAVEFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
        SKWAQLYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF
        GM PFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEF +GDKVFLKVAPMRGV+RFERRGKLSPRFV PF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.64

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
        SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRF+GPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.23

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
        SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFE+ DKVFLKVAPM+GV+RFERRGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.36

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT 
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
        SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF
        GMAPFEALY KCCRSP+CWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

KAA0066456.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.54

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRD KLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVS+GAVTMQLA+L VQPTLRQRIIDAQ NDPYLVEKRGL EAGQ  EFSLSSDGGLLFERRLCVPSDSAVK ELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTK+YQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
        SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF
        GMAPFEALYG+CCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

97.82

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEAGQAVEFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
        SKWAQLYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF
        GM PFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEF +GDKVFLKVAPMRGV+RFERRGKLSPRFV PF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7U330 Reverse transcriptase

0.0e+00

98.64

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
        SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRF+GPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7UAA8 Reverse transcriptase

0.0e+00

98.23

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
        SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFE+ DKVFLKVAPM+GV+RFERRGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7UP94 Pol protein

0.0e+00

98.36

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT 
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
        SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF
        GMAPFEALY KCCRSP+CWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

A0A5A7VJE2 Reverse transcriptase

0.0e+00

97.54

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRD KLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVS+GAVTMQLA+L VQPTLRQRIIDAQ NDPYLVEKRGL EAGQ  EFSLSSDGGLLFERRLCVPSDSAVK ELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTK+YQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
        SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF
        GMAPFEALYG+CCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQ RQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRLALPPSLSTVHDVFHVSMLRK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.4e-112

32.66

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLME
          VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVMRFE
         +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G +   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVMRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT35 Transposon Tf2-2 polyprotein

1.4e-112

32.66

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLME
          VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVMRFE
         +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G +   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVMRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT36 Transposon Tf2-3 polyprotein

1.4e-112

32.66

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLME
          VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVMRFE
         +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G +   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVMRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT37 Transposon Tf2-4 polyprotein

1.4e-112

32.66

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLME
          VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVMRFE
         +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G +   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVMRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

P0CT41 Transposon Tf2-12 polyprotein

1.4e-112

32.66

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLME
          VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVMRFE
         +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G +   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVMRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L K
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.4e-27

45.8

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Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTTTGGTTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTATTTATCGACGATATCTTGAT
ATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGC
AGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGT
AGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTCGTTTGGAGCAA
GGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGACGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGA
AGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTTGCGTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAATTGGCAGCA
GTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGACCATAAGAGCCTGAAATACTTCTTTACTCAGAAAGAATTGAATAT
GAGACAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATT
CGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGTGCAGTTACGATGCAGTTAGCCCAGTTGACAGTACAG
CCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCGTTATCCTCTGA
TGGTGGACTTTTGTTCGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTA
CGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGG
CAGAAACCAGCGGGTTTATTACAACCCTTGAGTATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGGACTCTGAGGGGTTTTACAGT
GATTTGGGTTGTGGTGGACAGGCTTACCAAGTCAGCACACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCCGAGATAGTGAGGT
TGCATGGGGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCT
TTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTT
GATGGAATTTGCCTATAATAACAGCTATCAGGCTACCATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTG
AGCAAGGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGTGTAGGCAGAAGAGTTATGCAGATGTG
AGGCGGAAGGATCTTGAGTTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCGCCTATGAGAGGTGTCATGCGTTTTGAAAGGAGAGGAAAGCTGAGTCCCCGTTTTGT
TGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAAG
GTGAAAACGTTGAGGAATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR
SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA
VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ
PTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPR
QKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA
FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQGLMGPELVQSTNEAIQKIRSRMHTAQCRQKSYADV
RRKDLEFEVGDKVFLKVAPMRGVMRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKGENVEE

Cmc08g0221521 (gene) of Melon (Charmono) v1.1 genome