| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036644.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.7e-56 | 97.39 | Show/hide |
Query: MKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNP
MKDLGEADVIL VKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAY VSRLSRYTHNP
Subjt: MKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNP
Query: DRYHWDALRHLLRYL
+RYHWDALRHLLRYL
Subjt: DRYHWDALRHLLRYL
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| KAA0045144.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.0e-55 | 96.52 | Show/hide |
Query: MKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNP
MKDLGEADVIL VKIRKNKTSLSLCQSHYVEKILKKF+SFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAY VSRLSRYTHNP
Subjt: MKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNP
Query: DRYHWDALRHLLRYL
+RYHWDALRHLLRYL
Subjt: DRYHWDALRHLLRYL
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| KAA0049695.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-63 | 94.66 | Show/hide |
Query: MELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
MEL+T+TKFFLSSHFEMKDLGEADVIL VKIRKNKTSLSLCQSHYVEKILKKFD FDVSPVRTPFDASKHL KNKGDSVSQPEYAKIIGSVMYLMNYTRP
Subjt: MELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
Query: DIAYVVSRLSRYTHNPDRYHWDALRHLLRYL
DIAY VSRLSRYTHNPDRYHWD LRHLLRYL
Subjt: DIAYVVSRLSRYTHNPDRYHWDALRHLLRYL
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| KAA0049794.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.2e-55 | 94.78 | Show/hide |
Query: MKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNP
MKDLGEAD IL VKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIG+VMYLMNYTRPDIAY +SRLSRYTHNP
Subjt: MKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNP
Query: DRYHWDALRHLLRYL
+RYHWDALRHLLRYL
Subjt: DRYHWDALRHLLRYL
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| TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.7e-77 | 96.08 | Show/hide |
Query: MVEADCILICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDS
MV ADCILICLYVDDMLIFGTNMELIT+TK+FLSSHFEMKDLGEADVIL VKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDS
Subjt: MVEADCILICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDS
Query: VSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYL
VSQPEYAKIIGSVMYLMNYTRPDIAY VSRLSRYTHNP+RYHWDALRHLLRYL
Subjt: VSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SZD1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-56 | 97.39 | Show/hide |
Query: MKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNP
MKDLGEADVIL VKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAY VSRLSRYTHNP
Subjt: MKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNP
Query: DRYHWDALRHLLRYL
+RYHWDALRHLLRYL
Subjt: DRYHWDALRHLLRYL
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| A0A5A7TPU1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.9e-56 | 96.52 | Show/hide |
Query: MKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNP
MKDLGEADVIL VKIRKNKTSLSLCQSHYVEKILKKF+SFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAY VSRLSRYTHNP
Subjt: MKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNP
Query: DRYHWDALRHLLRYL
+RYHWDALRHLLRYL
Subjt: DRYHWDALRHLLRYL
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| A0A5A7U3G0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-55 | 94.78 | Show/hide |
Query: MKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNP
MKDLGEAD IL VKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIG+VMYLMNYTRPDIAY +SRLSRYTHNP
Subjt: MKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNP
Query: DRYHWDALRHLLRYL
+RYHWDALRHLLRYL
Subjt: DRYHWDALRHLLRYL
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| A0A5A7U7W6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.4e-64 | 94.66 | Show/hide |
Query: MELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
MEL+T+TKFFLSSHFEMKDLGEADVIL VKIRKNKTSLSLCQSHYVEKILKKFD FDVSPVRTPFDASKHL KNKGDSVSQPEYAKIIGSVMYLMNYTRP
Subjt: MELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
Query: DIAYVVSRLSRYTHNPDRYHWDALRHLLRYL
DIAY VSRLSRYTHNPDRYHWD LRHLLRYL
Subjt: DIAYVVSRLSRYTHNPDRYHWDALRHLLRYL
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| A0A5D3C5T2 Ty1-copia retrotransposon protein | 2.3e-77 | 96.08 | Show/hide |
Query: MVEADCILICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDS
MV ADCILICLYVDDMLIFGTNMELIT+TK+FLSSHFEMKDLGEADVIL VKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDS
Subjt: MVEADCILICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDS
Query: VSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYL
VSQPEYAKIIGSVMYLMNYTRPDIAY VSRLSRYTHNP+RYHWDALRHLLRYL
Subjt: VSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.6e-16 | 34.69 | Show/hide |
Query: ILICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEY
I + LYVDD++I +M + N K +L F M DL E + ++I + + L QS YV+KIL KF+ + + V TP + + + D
Subjt: ILICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEY
Query: AKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYL
+IG +MY+M TRPD+ V+ LSRY+ + W L+ +LRYL
Subjt: AKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.9e-25 | 42.86 | Show/hide |
Query: EADCILICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTS--LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKK-----
E + I++ LYVDDMLI G + LI K LS F+MKDLG A IL +KI + +TS L L Q Y+E++L++F+ + PV TP L K
Subjt: EADCILICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTS--LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKK-----
Query: ---NKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYL
KG+ P Y+ +GS+MY M TRPDIA+ V +SR+ NP + HW+A++ +LRYL
Subjt: ---NKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYL
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 9.6e-17 | 32.68 | Show/hide |
Query: ICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAK
+ LYVDD+L+ G++ L+ F LSS F MKDLG L ++I+ + + L L Q+ Y E+IL D P+ TP + + ++
Subjt: ICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPEYAK
Query: IIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYLNILLKHSV
I+G++ YL TRPDI+Y V+ + + H P +D L+ +LRY+ + H +
Subjt: IIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYLNILLKHSV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.4e-20 | 37.11 | Show/hide |
Query: ILICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQP-E
+ + +YVDD+LI G + L+ NT LS F +KD E L ++ ++ T L L Q Y+ +L + + PV TP S L G ++ P E
Subjt: ILICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQP-E
Query: YAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYLNILLKHSVLTK
Y I+GS+ YL +TRPDI+Y V+RLS++ H P H AL+ +LRYL H + K
Subjt: YAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYLNILLKHSVLTK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.2e-19 | 35.85 | Show/hide |
Query: ILICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQP-E
I + +YVDD+LI G + L+ +T LS F +K+ + L ++ ++ L L Q Y +L + + PV TP S L + G + P E
Subjt: ILICLYVDDMLIFGTNMELITNTKFFLSSHFEMKDLGEADVILCVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQP-E
Query: YAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYLNILLKHSVLTK
Y I+GS+ YL +TRPD++Y V+RLS+Y H P HW+AL+ +LRYL H + K
Subjt: YAKIIGSVMYLMNYTRPDIAYVVSRLSRYTHNPDRYHWDALRHLLRYLNILLKHSVLTK
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