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Cmc08g0221691 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0221691
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionDEAD-box ATP-dependent RNA helicase 32
Genome locationCMiso1.1chr08:9624074..9625152
RNA-Seq ExpressionCmc08g0221691
SyntenyCmc08g0221691
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033961.1 DEAD-box ATP-dependent RNA helicase 32 [Cucumis melo var. makuwa]1.8e-1251Show/hide
Query:  MIRIKLIGEFLRSTREYLVWLKSP------------------------------------------GEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSVF
        MIRIKLIGEFL STREYLVWLKSP                                          GEGKGRGK+A   EG VTCHM TQFCFRVYVSVF
Subjt:  MIRIKLIGEFLRSTREYLVWLKSP------------------------------------------GEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSVF

KAA0045385.1 hypothetical protein E6C27_scaffold442G00010 [Cucumis melo var. makuwa]6.9e-1269.09Show/hide
Query:  IKLIGEFLRSTREYLVWLKSPGEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSVF
        I +I    R  R  +V +  PGEGKGRGKLASD EGSVTCHMGTQFCFRVYV+VF
Subjt:  IKLIGEFLRSTREYLVWLKSPGEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSVF

KAA0045828.1 DUF4219 domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]1.3e-1066.67Show/hide
Query:  IKLIGEFLRSTREYLVWLKSPGEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSV
        I +I    R  R  +V +  PGEGKGRGKLASD EGSVTCHMGTQFCFRVY+S+
Subjt:  IKLIGEFLRSTREYLVWLKSPGEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSV

KAA0051087.1 transposase [Cucumis melo var. makuwa]7.7e-1144.95Show/hide
Query:  IKLIGEFLRSTREYLVWLKS-------------------------------------------------PG-----EGKGRGKLASDGEGSVTCHMGTQF
        IKLIGEFL S REY VWLKS                                                 PG     EGKGRGKLASD EGSVTCHMGTQF
Subjt:  IKLIGEFLRSTREYLVWLKS-------------------------------------------------PG-----EGKGRGKLASDGEGSVTCHMGTQF

Query:  CFRVYVSVF
        C+R YVSVF
Subjt:  CFRVYVSVF

KAA0063966.1 hypothetical protein E6C27_scaffold616G001210 [Cucumis melo var. makuwa]1.0e-1069.09Show/hide
Query:  IKLIGEFLRSTREYLVWLKSPGEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSVF
        I +I    R  R  +V +   GEGKGRGKLASD EGSVTCHMGTQFCFRVYVSVF
Subjt:  IKLIGEFLRSTREYLVWLKSPGEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSVF

TrEMBL top hitse value%identityAlignment
A0A5A7SWX3 DEAD-box ATP-dependent RNA helicase 328.8e-1351Show/hide
Query:  MIRIKLIGEFLRSTREYLVWLKSP------------------------------------------GEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSVF
        MIRIKLIGEFL STREYLVWLKSP                                          GEGKGRGK+A   EG VTCHM TQFCFRVYVSVF
Subjt:  MIRIKLIGEFLRSTREYLVWLKSP------------------------------------------GEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSVF

A0A5A7TSJ0 DUF4219 domain-containing protein/UBN2 domain-containing protein6.3e-1166.67Show/hide
Query:  IKLIGEFLRSTREYLVWLKSPGEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSV
        I +I    R  R  +V +  PGEGKGRGKLASD EGSVTCHMGTQFCFRVY+S+
Subjt:  IKLIGEFLRSTREYLVWLKSPGEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSV

A0A5A7TVG7 Uncharacterized protein3.4e-1269.09Show/hide
Query:  IKLIGEFLRSTREYLVWLKSPGEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSVF
        I +I    R  R  +V +  PGEGKGRGKLASD EGSVTCHMGTQFCFRVYV+VF
Subjt:  IKLIGEFLRSTREYLVWLKSPGEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSVF

A0A5A7VC05 Uncharacterized protein4.8e-1169.09Show/hide
Query:  IKLIGEFLRSTREYLVWLKSPGEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSVF
        I +I    R  R  +V +   GEGKGRGKLASD EGSVTCHMGTQFCFRVYVSVF
Subjt:  IKLIGEFLRSTREYLVWLKSPGEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSVF

A0A5D3CKP0 Transposase3.7e-1144.95Show/hide
Query:  IKLIGEFLRSTREYLVWLKS-------------------------------------------------PG-----EGKGRGKLASDGEGSVTCHMGTQF
        IKLIGEFL S REY VWLKS                                                 PG     EGKGRGKLASD EGSVTCHMGTQF
Subjt:  IKLIGEFLRSTREYLVWLKS-------------------------------------------------PG-----EGKGRGKLASDGEGSVTCHMGTQF

Query:  CFRVYVSVF
        C+R YVSVF
Subjt:  CFRVYVSVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGGATCAAGTTAATTGGAGAATTTTTACGGTCAACTAGGGAGTACCTTGTTTGGCTAAAATCTCCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGC
GACGGAGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTAGGATCAAGTTAATTGGAGAATTTTTACGGTCAACTAGGGAGTACCTTGTTTGGCTAAAATCTCCAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGC
GACGGAGAAGGATCCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTCCGTTTTTAATGAAAATTTAGTTTCCCTC
CTTTAAAGAAAGTGTTTCATGTTATTATTTCTTTTTAGTAATGACCTCAGCTTAGTATAAAAAGTTGGGTCGTTACAGGCCAGCGGGAGCATGTGCCCCCCCCCC
ACACACACACACATTATCGATTTTTATATTTTAATATTAATTTTGAAGTATCAAACTATAATATATATTAAAG
Protein sequenceShow/hide protein sequence
MIRIKLIGEFLRSTREYLVWLKSPGEGKGRGKLASDGEGSVTCHMGTQFCFRVYVSVF