| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0045309.1 pol protein [Cucumis melo var. makuwa] | 1.3e-47 | 80.51 | Show/hide |
Query: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
M LCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKIDL GYHQLRIRDGDIPKT+FRS+YG+YEF VISFGLTNA VFMDLMN+VFKDFLD+F+
Subjt: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
Query: IVFIDDILVYSNSTLDYK
IVFIDDIL+YS + +++
Subjt: IVFIDDILVYSNSTLDYK
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| KAA0054634.1 pol protein [Cucumis melo var. makuwa] | 1.2e-48 | 80.51 | Show/hide |
Query: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
MCLCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKIDL GYHQLRIRDGDIPKT+FRS+YG+YEF V+SFGLTNA VFMDLMN+VFKDFLD+F+
Subjt: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
Query: IVFIDDILVYSNSTLDYK
IVFIDDIL+YS + +++
Subjt: IVFIDDILVYSNSTLDYK
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| KAA0056186.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.3e-47 | 77.97 | Show/hide |
Query: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
MCLCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKI L LGYHQLRI+DGD+PKT+FRS+YG+YEF V+SFGLTNA VFMDLMN+VF++FLDTF+
Subjt: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
Query: IVFIDDILVYSNSTLDYK
IVFIDDIL+YS + ++++
Subjt: IVFIDDILVYSNSTLDYK
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| KAA0066274.1 pol protein [Cucumis melo var. makuwa] | 1.0e-47 | 77.97 | Show/hide |
Query: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
MCLCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKIDL GYHQLRI+DGD+PKT+FRS+YG+YEF V+SFGLTNA VFMDLMN+VF++FLDTF+
Subjt: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
Query: IVFIDDILVYSNSTLDYK
IVFIDDIL+YS + +++
Subjt: IVFIDDILVYSNSTLDYK
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| TYK08914.1 pol protein [Cucumis melo var. makuwa] | 1.0e-47 | 80.51 | Show/hide |
Query: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
M LCIDY+ELNKV VKNRYPLPRIDDLFDQLRGATVFSKIDL GYHQLRIRDGDIPKT+FRS+YG+YEF V+SFGLTNA VFMDLMN+VFKDFLD+F+
Subjt: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
Query: IVFIDDILVYSNSTLDYK
IVFIDDIL+YS + +++
Subjt: IVFIDDILVYSNSTLDYK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TVN9 Reverse transcriptase | 6.4e-48 | 80.51 | Show/hide |
Query: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
M LCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKIDL GYHQLRIRDGDIPKT+FRS+YG+YEF VISFGLTNA VFMDLMN+VFKDFLD+F+
Subjt: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
Query: IVFIDDILVYSNSTLDYK
IVFIDDIL+YS + +++
Subjt: IVFIDDILVYSNSTLDYK
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| A0A5A7UHL7 Reverse transcriptase | 5.7e-49 | 80.51 | Show/hide |
Query: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
MCLCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKIDL GYHQLRIRDGDIPKT+FRS+YG+YEF V+SFGLTNA VFMDLMN+VFKDFLD+F+
Subjt: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
Query: IVFIDDILVYSNSTLDYK
IVFIDDIL+YS + +++
Subjt: IVFIDDILVYSNSTLDYK
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| A0A5A7UPE4 Ty3-gypsy retrotransposon protein | 6.4e-48 | 77.97 | Show/hide |
Query: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
MCLCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKI L LGYHQLRI+DGD+PKT+FRS+YG+YEF V+SFGLTNA VFMDLMN+VF++FLDTF+
Subjt: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
Query: IVFIDDILVYSNSTLDYK
IVFIDDIL+YS + ++++
Subjt: IVFIDDILVYSNSTLDYK
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| A0A5A7VG41 Pol protein | 4.9e-48 | 77.97 | Show/hide |
Query: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
MCLCIDY+ELNKV VKNRYPLPRIDDLFDQL+GATVFSKIDL GYHQLRI+DGD+PKT+FRS+YG+YEF V+SFGLTNA VFMDLMN+VF++FLDTF+
Subjt: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
Query: IVFIDDILVYSNSTLDYK
IVFIDDIL+YS + +++
Subjt: IVFIDDILVYSNSTLDYK
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| A0A5D3CCF4 Pol protein | 4.9e-48 | 80.51 | Show/hide |
Query: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
M LCIDY+ELNKV VKNRYPLPRIDDLFDQLRGATVFSKIDL GYHQLRIRDGDIPKT+FRS+YG+YEF V+SFGLTNA VFMDLMN+VFKDFLD+F+
Subjt: MCLCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFL
Query: IVFIDDILVYSNSTLDYK
IVFIDDIL+YS + +++
Subjt: IVFIDDILVYSNSTLDYK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 3.2e-20 | 37.1 | Show/hide |
Query: LCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIV
+ IDY++LN++ V +R+P+P +D++ +L F+ IDL G+HQ+ + + KT+F +K+G+YE+ + FGL NA F MN + + L+ +V
Subjt: LCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIV
Query: FIDDILVYSNSTLDYKIQNASRVF
++DDI+V+S S LD +Q+ VF
Subjt: FIDDILVYSNSTLDYKIQNASRVF
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.6e-19 | 36.28 | Show/hide |
Query: IDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFI
IDY++LN++ + +RYP+P +D++ +L F+ IDL G+HQ+ + + I KT+F +K G+YE+ + FGL NA F MN + + L+ +V++
Subjt: IDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIVFI
Query: DDILVYSNSTLDY
DDI+++S S ++
Subjt: DDILVYSNSTLDY
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| P31843 RNA-directed DNA polymerase homolog | 5.2e-31 | 54.13 | Show/hide |
Query: LCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIV
+CIDY+ L KV +KN+YP+PR+DDLFD+L AT F+K+DL GY Q+RI GD PKT+ ++YG++EF V+ FGLTNA+ F +LMN V ++LD F++V
Subjt: LCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIV
Query: FIDDILVYS
++DD++VY+
Subjt: FIDDILVYS
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.7e-21 | 44.14 | Show/hide |
Query: LCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIV
LC+DY+ LNK + + +PLPRID+L ++ A +F+ +DLH GYHQ+ + D KT+F + G YE+TV+ FGL NA F M F+D F+ V
Subjt: LCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIV
Query: FIDDILVYSNS
++DDIL++S S
Subjt: FIDDILVYSNS
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.7e-21 | 44.14 | Show/hide |
Query: LCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIV
LC+DY+ LNK + + +PLPRID+L ++ A +F+ +DLH GYHQ+ + D KT+F + G YE+TV+ FGL NA F M F+D F+ V
Subjt: LCIDYKELNKVIVKNRYPLPRIDDLFDQLRGATVFSKIDLHLGYHQLRIRDGDIPKTSFRSKYGNYEFTVISFGLTNAVVVFMDLMNKVFKDFLDTFLIV
Query: FIDDILVYSNS
++DDIL++S S
Subjt: FIDDILVYSNS
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