CuGenDBv2

Gene ID	Cmc08g0221781
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr08:9858401..9860660
RNA-Seq Expression	Cmc08g0221781
Synteny	Cmc08g0221781
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0032541.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.09

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLT                         QGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY EKIQIYT+HKSLKYFFTQKELNMRQRRWLELVKDY CEILYHPGKANVVADAL RKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVT Q AQLSVQPTLRQKIIAAQ NDPYL +KRRMVETGQGEDFSIS+DDGLMFEGRLCVPED+ V+TELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWR MKREVA+FVSRCLVCQQ+K+PRQH  GL+Q LSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQ LEDMLRAC+LEFSGSWDSHLHLMEF+YNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR
        EILERIGPVAYRLALPPSF+AVHDVFH+SMLR+
Subjt:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR

KAA0040942.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.22

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMN VFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKF KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLT                         QGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVV ALKIWRHYLYGEKIQIYT+HKSLKYFFTQKELNMRQRRWLELVKDY CEILYHPGKANVVADAL RKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVT Q AQLSVQPTLRQKIIAAQLNDPYL +KRRMVETGQGEDFSISSDDGLMFEGRLCVPEDS V+TELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWR MKREVA+FVSRCLVCQQ+KAPRQH  GLLQPLSVPGWKWESVSMDFITGLPKTLKG+TVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQ LEDMLRAC+LEFSGSWDSHLHLMEF+YNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVG F
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR
        EILERIGPVAYRLALPPSF+ VHDVFH+SMLR+
Subjt:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR

KAA0045309.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.22

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        +SFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVED S IASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLT                         QGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYT+HKSLKYFFTQKELNMRQRRWLELVKDY CEILYHPGKANVVAD+L RKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVT Q AQLSVQPTLRQKIIAAQLNDPYL +KRRMVETGQGEDFSISSDDGLMFEGRLCVPEDS V+TELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWR MKREVA+FVSRCLVCQQ+KAPRQH  GLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI
        SKWGQLY+TEIVRLHGVPVSIISDRD RFTSKFWKGLQLAL TRLDFST FHPQTDGQTERLNQ LEDMLRAC+LEFSGSWDSHLHLMEF+YNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKV PMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR
        EILERIGPVAYRLALPPSF+AVHDVFH+SMLR+
Subjt:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR

KAA0050760.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

91.81

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEA+HEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLT                         QGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYT+HKSLKYFFTQKELNMRQRRWLELVKDY CEILYHPGKANVVADAL RKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVT Q AQL+VQPTLRQKIIAAQL+DPYL +KRR+VET QGE FSISSDDGLMFEGRLCVPEDS V+TELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWR MKR+VA+FVSRCLVCQQ+KAPRQH  GLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSI+SDRD RFTSKFWKGLQ+ALGTRLDFST FHPQTDGQTERLNQ LEDMLRAC+LEFSGSWDSHLHLMEF+YNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR
        EILERIGPVAYRLALPPSF+AVHDVFH+SMLR+
Subjt:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR

KAA0060745.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.63

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACESSFQELK KLV APVLT                         QGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYT+HKSLKYFFTQKELNMRQRRWLELVKDY CEILYHPGKANVVADAL RKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVT Q AQLSVQPTLRQKIIAAQLNDPYL +KRRMVETGQGEDFSIS DDGLMFEGRLCVPEDS V+TELLTEAHSS FTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWR MKREVA+FVSRCLVCQQ+KAPRQ   GLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFSTTFHPQTDGQ ERLNQ LEDMLRAC+LEFSGSWDSHLHLMEF+YNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLG ELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR
        EILERIGPVAYRLALPPSF AVHDVFH+SMLR+
Subjt:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SSL3 Reverse transcriptase

0.0e+00

92.09

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLT                         QGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY EKIQIYT+HKSLKYFFTQKELNMRQRRWLELVKDY CEILYHPGKANVVADAL RKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVT Q AQLSVQPTLRQKIIAAQ NDPYL +KRRMVETGQGEDFSIS+DDGLMFEGRLCVPED+ V+TELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWR MKREVA+FVSRCLVCQQ+K+PRQH  GL+Q LSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQ LEDMLRAC+LEFSGSWDSHLHLMEF+YNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR
        EILERIGPVAYRLALPPSF+AVHDVFH+SMLR+
Subjt:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR

A0A5A7TBV4 Pol protein

0.0e+00

92.22

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMN VFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKF KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLT                         QGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVV ALKIWRHYLYGEKIQIYT+HKSLKYFFTQKELNMRQRRWLELVKDY CEILYHPGKANVVADAL RKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVT Q AQLSVQPTLRQKIIAAQLNDPYL +KRRMVETGQGEDFSISSDDGLMFEGRLCVPEDS V+TELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWR MKREVA+FVSRCLVCQQ+KAPRQH  GLLQPLSVPGWKWESVSMDFITGLPKTLKG+TVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQ LEDMLRAC+LEFSGSWDSHLHLMEF+YNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVG F
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR
        EILERIGPVAYRLALPPSF+ VHDVFH+SMLR+
Subjt:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR

A0A5A7TVN9 Reverse transcriptase

0.0e+00

92.22

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        +SFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVED S IASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLT                         QGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYT+HKSLKYFFTQKELNMRQRRWLELVKDY CEILYHPGKANVVAD+L RKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVT Q AQLSVQPTLRQKIIAAQLNDPYL +KRRMVETGQGEDFSISSDDGLMFEGRLCVPEDS V+TELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWR MKREVA+FVSRCLVCQQ+KAPRQH  GLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI
        SKWGQLY+TEIVRLHGVPVSIISDRD RFTSKFWKGLQLAL TRLDFST FHPQTDGQTERLNQ LEDMLRAC+LEFSGSWDSHLHLMEF+YNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKV PMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR
        EILERIGPVAYRLALPPSF+AVHDVFH+SMLR+
Subjt:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR

A0A5A7U6G5 Reverse transcriptase

0.0e+00

91.81

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEA+HEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACE SFQELK KLVTAPVLT                         QGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYT+HKSLKYFFTQKELNMRQRRWLELVKDY CEILYHPGKANVVADAL RKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVT Q AQL+VQPTLRQKIIAAQL+DPYL +KRR+VET QGE FSISSDDGLMFEGRLCVPEDS V+TELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWR MKR+VA+FVSRCLVCQQ+KAPRQH  GLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSI+SDRD RFTSKFWKGLQ+ALGTRLDFST FHPQTDGQTERLNQ LEDMLRAC+LEFSGSWDSHLHLMEF+YNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR
        EILERIGPVAYRLALPPSF+AVHDVFH+SMLR+
Subjt:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR

A0A5A7V4E4 Reverse transcriptase

0.0e+00

92.63

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA
        PRPSTVSEIRSFLGLAGYYRRFVEDFS IASPLTQLTRKGTPFVWSPACESSFQELK KLV APVLT                         QGKVVAYA
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLT-------------------------QGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYT+HKSLKYFFTQKELNMRQRRWLELVKDY CEILYHPGKANVVADAL RKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVT Q AQLSVQPTLRQKIIAAQLNDPYL +KRRMVETGQGEDFSIS DDGLMFEGRLCVPEDS V+TELLTEAHSS FTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWR MKREVA+FVSRCLVCQQ+KAPRQ   GLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFSTTFHPQTDGQ ERLNQ LEDMLRAC+LEFSGSWDSHLHLMEF+YNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLG ELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR
        EILERIGPVAYRLALPPSF AVHDVFH+SMLR+
Subjt:  EILERIGPVAYRLALPPSFSAVHDVFHVSMLRR

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

7.3e-98

30.79

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLTQ------------------GKV-----------
         +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+P    + + +K  LV+ PVL                    G V           
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLTQ------------------GKV-----------

Query:  -VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTNHKSLKYFFTQKE--LNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I T+H++L    T +    N R  RW   ++D+  EI Y PG AN +ADAL R  
Subjt:  -VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTNHKSLKYFFTQKE--LNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGR--LCVPEDSVVQTELL
             ++ +  P+ +D E   I            Q+S+    + +++    ND  L+      +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGR--LCVPEDSVVQTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+ +++++  +V  C  CQ  K+      G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLME
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQT+E +LR        +W  H+ L++
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLME

Query:  FSYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFV
         SYNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   
Subjt:  FSYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFV

Query:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSFSAV-HDVFHVSMLRR
        K  KL+P F GPF +L++ GP  Y L LP S   +    FHVS L +
Subjt:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSFSAV-HDVFHVSMLRR

P0CT35 Transposon Tf2-2 polyprotein

7.3e-98

30.79

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLTQ------------------GKV-----------
         +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+P    + + +K  LV+ PVL                    G V           
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLTQ------------------GKV-----------

Query:  -VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTNHKSLKYFFTQKE--LNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I T+H++L    T +    N R  RW   ++D+  EI Y PG AN +ADAL R  
Subjt:  -VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTNHKSLKYFFTQKE--LNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGR--LCVPEDSVVQTELL
             ++ +  P+ +D E   I            Q+S+    + +++    ND  L+      +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGR--LCVPEDSVVQTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+ +++++  +V  C  CQ  K+      G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLME
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQT+E +LR        +W  H+ L++
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLME

Query:  FSYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFV
         SYNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   
Subjt:  FSYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFV

Query:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSFSAV-HDVFHVSMLRR
        K  KL+P F GPF +L++ GP  Y L LP S   +    FHVS L +
Subjt:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSFSAV-HDVFHVSMLRR

P0CT36 Transposon Tf2-3 polyprotein

7.3e-98

30.79

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLTQ------------------GKV-----------
         +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+P    + + +K  LV+ PVL                    G V           
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLTQ------------------GKV-----------

Query:  -VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTNHKSLKYFFTQKE--LNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I T+H++L    T +    N R  RW   ++D+  EI Y PG AN +ADAL R  
Subjt:  -VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTNHKSLKYFFTQKE--LNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGR--LCVPEDSVVQTELL
             ++ +  P+ +D E   I            Q+S+    + +++    ND  L+      +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGR--LCVPEDSVVQTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+ +++++  +V  C  CQ  K+      G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLME
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQT+E +LR        +W  H+ L++
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLME

Query:  FSYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFV
         SYNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   
Subjt:  FSYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFV

Query:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSFSAV-HDVFHVSMLRR
        K  KL+P F GPF +L++ GP  Y L LP S   +    FHVS L +
Subjt:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSFSAV-HDVFHVSMLRR

P0CT37 Transposon Tf2-4 polyprotein

7.3e-98

30.79

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLTQ------------------GKV-----------
         +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+P    + + +K  LV+ PVL                    G V           
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLTQ------------------GKV-----------

Query:  -VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTNHKSLKYFFTQKE--LNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I T+H++L    T +    N R  RW   ++D+  EI Y PG AN +ADAL R  
Subjt:  -VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTNHKSLKYFFTQKE--LNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGR--LCVPEDSVVQTELL
             ++ +  P+ +D E   I            Q+S+    + +++    ND  L+      +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGR--LCVPEDSVVQTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+ +++++  +V  C  CQ  K+      G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLME
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQT+E +LR        +W  H+ L++
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLME

Query:  FSYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFV
         SYNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   
Subjt:  FSYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFV

Query:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSFSAV-HDVFHVSMLRR
        K  KL+P F GPF +L++ GP  Y L LP S   +    FHVS L +
Subjt:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSFSAV-HDVFHVSMLRR

P0CT41 Transposon Tf2-12 polyprotein

7.3e-98

30.79

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLTQ------------------GKV-----------
         +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+P    + + +K  LV+ PVL                    G V           
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLTQ------------------GKV-----------

Query:  -VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTNHKSLKYFFTQKE--LNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I T+H++L    T +    N R  RW   ++D+  EI Y PG AN +ADAL R  
Subjt:  -VAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTNHKSLKYFFTQKE--LNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGR--LCVPEDSVVQTELL
             ++ +  P+ +D E   I            Q+S+    + +++    ND  L+      +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAAQLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGR--LCVPEDSVVQTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+ +++++  +V  C  CQ  K+      G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLME
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQT+E +LR        +W  H+ L++
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLME

Query:  FSYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFV
         SYNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   
Subjt:  FSYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFV

Query:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSFSAV-HDVFHVSMLRR
        K  KL+P F GPF +L++ GP  Y L LP S   +    FHVS L +
Subjt:  KKGKLSPRFVGPFEILERIGPVAYRLALPPSFSAV-HDVFHVSMLRR

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.5e-24

43.8

Show/hide

Query:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVW
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP P   +E+R FLGL GYYRRFV+++  I  PLT+L +K +   W
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVW

Query:  SPACESSFQELKLKLVTAPVL
        +     +F+ LK  + T PVL
Subjt:  SPACESSFQELKLKLVTAPVL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGATGACATC
TTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAATAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTC
TGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAAGGAGTTTCTGTGGACCCAGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACA
GTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACATATAGCCAGCCCGTTGACCCAGTTAACCAGGAAGGGA
ACCCCTTTTGTCTGGAGCCCAGCATGCGAGAGTAGCTTTCAGGAGCTCAAGCTGAAGCTAGTGACTGCACCAGTCCTGACACAAGGTAAGGTAGTTGCTTATGCC
TCCCGCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAG
AAGATACAGATTTACACCAACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTATGGC
TGCGAGATCTTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGAAGGAAGGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTC
AGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGAACAGTTTGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATCATCGCTGCT
CAGCTGAATGATCCTTACTTGGTCAAGAAGCGTCGTATGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGC
TTGTGTGTGCCGGAAGACAGCGTAGTTCAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTCACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTA
AGGAGTGTCTATTGGTGGAGGAACATGAAGAGGGAGGTGGCAAACTTTGTCAGTAGGTGCTTGGTGTGCCAGCAGATGAAGGCACCTAGGCAGCATCGAACAGGG
TTGTTACAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTCATTACGGGACTGCCCAAAACCCTAAAGGGCTATACAGTGATCTGGGTT
GTTGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGACAGAGATTGTGAGACTACAT
GGAGTACCCGTATCCATCATTTCAGACAGAGACACTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACGAGGTTAGACTTCAGCACGACA
TTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGACTTTGGAAGACATGCTGCGGGCCTGCATGCTAGAGTTTTCAGGAAGTTGGGACTCTCACCTG
CATCTGATGGAGTTTTCCTATAATAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCTCCTGTCTGCTGGGGT
GAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAATGCAGCCATACAGAAAATCCGAGCTCGTATGCTGACAGCACAGAGCAGACAGAAG
AGTTATGCTGATGTACGACGTAAGGATCTCGAGTTTGAAGTGGGAGACATGGTCTTTCTGAAGGTAGCACCTATGAAGGGTGTTCTGAGGTTCGTGAAGAAGGGG
AAGCTGAGTCCACGCTTCGTAGGGCCGTTTGAGATACTGGAGCGGATTGGCCCCGTGGCCTACCGCTTGGCGCTGCCCCCATCTTTTTCTGCAGTGCATGACGTA
TTCCATGTCTCCATGCTAAGGAGGTCAGCGAGAACTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPST
VSEIRSFLGLAGYYRRFVEDFSHIASPLTQLTRKGTPFVWSPACESSFQELKLKLVTAPVLTQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGE
KIQIYTNHKSLKYFFTQKELNMRQRRWLELVKDYGCEILYHPGKANVVADALRRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTEQFAQLSVQPTLRQKIIAA
QLNDPYLVKKRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSVVQTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVANFVSRCLVCQQMKAPRQHRTG
LLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTT
FHPQTDGQTERLNQTLEDMLRACMLEFSGSWDSHLHLMEFSYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQK
SYADVRRKDLEFEVGDMVFLKVAPMKGVLRFVKKGKLSPRFVGPFEILERIGPVAYRLALPPSFSAVHDVFHVSMLRRSART

Cmc08g0221781 (gene) of Melon (Charmono) v1.1 genome