| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO45752.1 pol protein [Cucumis melo subsp. melo] | 2.5e-107 | 98.07 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
VSHSAALITRQAPLHRDLERA IAV VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Subjt: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Query: EAHSPHF
EAHS F
Subjt: EAHSPHF
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| KAA0051368.1 pol protein [Cucumis melo var. makuwa] | 5.1e-108 | 98.55 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
VSHSAALITRQAPLHRDLERA IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Subjt: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Query: EAHSPHF
EAHS F
Subjt: EAHSPHF
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| KAA0053280.1 pol protein [Cucumis melo var. makuwa] | 1.9e-107 | 97.58 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL KDYDCEILYHPGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
VSHSAALITRQAPLHRDLERA IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLC+PSDSAVKTELLS
Subjt: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Query: EAHSPHF
EAHS F
Subjt: EAHSPHF
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| KAA0067622.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.3e-111 | 98.11 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
VSHSAALITRQAPLHRDLERA IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ AEFSLSSDGGLLFERRLCVPSDSAVKTELL+
Subjt: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Query: EAHSPHFPCTQV
EAHS HFPCTQV
Subjt: EAHSPHFPCTQV
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| TYK01613.1 pol protein [Cucumis melo var. makuwa] | 5.1e-108 | 98.55 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
VSHSAALITRQAPLHRDLERA IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Subjt: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Query: EAHSPHF
EAHS F
Subjt: EAHSPHF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U7V9 Reverse transcriptase | 2.5e-108 | 98.55 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
VSHSAALITRQAPLHRDLERA IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Subjt: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Query: EAHSPHF
EAHS F
Subjt: EAHSPHF
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| A0A5A7UDJ5 Pol protein | 9.4e-108 | 97.58 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL KDYDCEILYHPGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
VSHSAALITRQAPLHRDLERA IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLC+PSDSAVKTELLS
Subjt: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Query: EAHSPHF
EAHS F
Subjt: EAHSPHF
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| A0A5A7VGW8 Reverse transcriptase | 6.3e-112 | 98.11 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
VSHSAALITRQAPLHRDLERA IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ AEFSLSSDGGLLFERRLCVPSDSAVKTELL+
Subjt: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Query: EAHSPHFPCTQV
EAHS HFPCTQV
Subjt: EAHSPHFPCTQV
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| A0A5D3BPI1 Reverse transcriptase | 2.5e-108 | 98.55 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
VSHSAALITRQAPLHRDLERA IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Subjt: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Query: EAHSPHF
EAHS F
Subjt: EAHSPHF
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| Q84KB0 Pol protein | 1.2e-107 | 98.07 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Query: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
VSHSAALITRQAPLHRDLERA IAV VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Subjt: VSHSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLS
Query: EAHSPHF
EAHS F
Subjt: EAHSPHF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.1e-16 | 43.88 | Show/hide |
Query: QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
Q G ++Y SR L HE NY T + EL A+V+A K +RHYL G +I +DH+ L + + K+ N + RW + ++D +I Y GK N VADALSR
Subjt: QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 2.8e-16 | 42 | Show/hide |
Query: QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK-IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
Q+G+ + SR LK EQNY T++ EL A+V+AL +++LYG + I IFTDH+ L + + N + +RW + ++ ++ Y PGK N VADALSR+
Subjt: QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK-IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 3.4e-14 | 41.84 | Show/hide |
Query: QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
Q G +++ SR L HE NY + EL A+V+A K +RHYL G + I +DH+ L++ KE + RW + +Y +I Y GK N VADALSR
Subjt: QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.9e-17 | 43.62 | Show/hide |
Query: VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
+AY SR L E+NY T + E+ A++++L R YLYG I+++TDH+ L + + N + +RW +++Y+CE++Y PGK+NVVADALSR
Subjt: VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
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| Q9UR07 Transposon Tf2-11 polyprotein | 3.4e-14 | 27.59 | Show/hide |
Query: VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS
V Y S ++ + NY D E+ A++ +LK WRHYL E +I TDH++L T + N R RW ++D++ EI Y PG AN +ADALSR
Subjt: VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS
Query: HSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLS
++ P+ +D E I + Q+++ + +++ +ND L+ L + E ++ GLL + + +P+D+ + ++
Subjt: HSAALITRQAPLHRDLERAGIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLS
Query: EAH
+ H
Subjt: EAH
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