; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0221961 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0221961
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr08:10119030..10120911
RNA-Seq ExpressionCmc08g0221961
SyntenyCmc08g0221961
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0043227 - membrane-bounded organelle (cellular component)
GO:0043565 - sequence-specific DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR041588 - Integrase zinc-binding domain
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR036397 - Ribonuclease H superfamily
IPR012337 - Ribonuclease H-like superfamily
IPR001584 - Integrase, catalytic core


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040188.1 pol protein [Cucumis melo var. makuwa]3.1e-29088.58Show/hide
Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVF+EFLDTFVI                                             VSFLGHVVSKA VSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW

Query:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA
        TRPSTVSEV SFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVWS ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL  VLMQQGKVVAYA
Subjt:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAV+FALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH
         APLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQA+GFSI SDG L+FERRLCVPSDSA+K ELLSEAHSSPF MH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY A
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
        SKWAQLYMSEIV LHGVPVSIVSDRDARFTS+FWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Subjt:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP

KAA0051368.1 pol protein [Cucumis melo var. makuwa]1.2e-29493.15Show/hide
Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI----------------------VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFV
        MSFGLTNAPAVFMDLMNRVFR+FLDTFVI                      VSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEV SFLGLAGYYR FV
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI----------------------VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFV

Query:  ENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF
        ENFSRIATPLTQLTRKGAPFVWS ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF
Subjt:  ENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQ
        ALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQ
Subjt:  ALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQ

Query:  LAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREV
        LAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQ   FS+ SDG LLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREV
Subjt:  LAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREV

Query:  AEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVS
        AEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV LHGVPVSIVS
Subjt:  AEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVS

Query:  DRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
        DRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Subjt:  DRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP

KAA0057672.1 pol protein [Cucumis melo var. makuwa]3.1e-29088.75Show/hide
Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSKA VSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW

Query:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA
        TRPSTVSEV SFLGLAGYYR FVENFSR ATPLTQLTRKGAPFVWS ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL CVLMQQGKVVAYA
Subjt:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FS+ SDG LLFERRLCVPSDSAVKTELL+EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT 
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
        SKWAQLYMSEIV LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFP
Subjt:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP

KAA0062112.1 pol protein [Cucumis melo var. makuwa]1.6e-29189.27Show/hide
Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSK  VSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW

Query:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA
        TRPSTVSEV SFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVWS ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKKGL CVLMQQGKVVAYA
Subjt:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FS+ SDG LLFERRLCVPSDSAVKTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT+
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
        SKWAQLYMSEIV LHGVPVSIVSDRDARFTSKFWKGLQT+MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Subjt:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP

TYK01613.1 pol protein [Cucumis melo var. makuwa]9.6e-29289.45Show/hide
Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSKA VSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW

Query:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA
        TRPSTVSEV SFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVWS ACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL CVLMQQGKVVAYA
Subjt:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQ   FS+ SDG LLFERRLCVPSDSAVKTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
        SKWAQLYMSEIV LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Subjt:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP

TrEMBL top hitse value%identityAlignment
A0A5A7TB42 Reverse transcriptase1.5e-29088.58Show/hide
Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVF+EFLDTFVI                                             VSFLGHVVSKA VSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW

Query:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA
        TRPSTVSEV SFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVWS ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL  VLMQQGKVVAYA
Subjt:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAV+FALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH
         APLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQA+GFSI SDG L+FERRLCVPSDSA+K ELLSEAHSSPF MH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY A
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
        SKWAQLYMSEIV LHGVPVSIVSDRDARFTS+FWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Subjt:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP

A0A5A7U7V9 Reverse transcriptase5.9e-29593.15Show/hide
Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI----------------------VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFV
        MSFGLTNAPAVFMDLMNRVFR+FLDTFVI                      VSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEV SFLGLAGYYR FV
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI----------------------VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFV

Query:  ENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF
        ENFSRIATPLTQLTRKGAPFVWS ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF
Subjt:  ENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQ
        ALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQ
Subjt:  ALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQ

Query:  LAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREV
        LAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQ   FS+ SDG LLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREV
Subjt:  LAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREV

Query:  AEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVS
        AEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV LHGVPVSIVS
Subjt:  AEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVS

Query:  DRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
        DRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Subjt:  DRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP

A0A5A7UP94 Pol protein1.5e-29088.75Show/hide
Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSKA VSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW

Query:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA
        TRPSTVSEV SFLGLAGYYR FVENFSR ATPLTQLTRKGAPFVWS ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL CVLMQQGKVVAYA
Subjt:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FS+ SDG LLFERRLCVPSDSAVKTELL+EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT 
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
        SKWAQLYMSEIV LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFP
Subjt:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP

A0A5A7V1N3 Reverse transcriptase7.9e-29289.27Show/hide
Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSK  VSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW

Query:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA
        TRPSTVSEV SFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVWS ACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKKGL CVLMQQGKVVAYA
Subjt:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FS+ SDG LLFERRLCVPSDSAVKTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT+
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
        SKWAQLYMSEIV LHGVPVSIVSDRDARFTSKFWKGLQT+MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Subjt:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP

A0A5D3BPI1 Reverse transcriptase4.6e-29289.45Show/hide
Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVI                                             VSFLGHVVSKA VSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVI---------------------------------------------VSFLGHVVSKAEVSVDPAKIEAVTGW

Query:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA
        TRPSTVSEV SFLGLAGYYR FVENFSRIATPLTQLTRKGAPFVWS ACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL CVLMQQGKVVAYA
Subjt:  TRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQ   FS+ SDG LLFERRLCVPSDSAVKTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
        SKWAQLYMSEIV LHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Subjt:  SKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.3e-6931.21Show/hide
Query:  VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGS
        V F+G+ +S+   +     I+ V  W +P    E+  FLG   Y R F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S  
Subjt:  VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGS

Query:  FVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLEL
         ++ +DAS   +  VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   
Subjt:  FVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLEL

Query:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLV------EKRGLAEAGQA
        ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+      +KR        
Subjt:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLV------EKRGLAEAGQA

Query:  DGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN
        DG  I S  ++L      +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Subjt:  DGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN

Query:  VFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT
        + MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQT
Subjt:  VFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT

Query:  ERLNQVLEDMLRACALEFP
        ER NQ +E +LR      P
Subjt:  ERLNQVLEDMLRACALEFP

P0CT35 Transposon Tf2-2 polyprotein3.3e-6931.21Show/hide
Query:  VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGS
        V F+G+ +S+   +     I+ V  W +P    E+  FLG   Y R F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S  
Subjt:  VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGS

Query:  FVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLEL
         ++ +DAS   +  VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   
Subjt:  FVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLEL

Query:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLV------EKRGLAEAGQA
        ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+      +KR        
Subjt:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLV------EKRGLAEAGQA

Query:  DGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN
        DG  I S  ++L      +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Subjt:  DGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN

Query:  VFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT
        + MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQT
Subjt:  VFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT

Query:  ERLNQVLEDMLRACALEFP
        ER NQ +E +LR      P
Subjt:  ERLNQVLEDMLRACALEFP

P0CT36 Transposon Tf2-3 polyprotein3.3e-6931.21Show/hide
Query:  VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGS
        V F+G+ +S+   +     I+ V  W +P    E+  FLG   Y R F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S  
Subjt:  VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGS

Query:  FVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLEL
         ++ +DAS   +  VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   
Subjt:  FVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLEL

Query:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLV------EKRGLAEAGQA
        ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+      +KR        
Subjt:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLV------EKRGLAEAGQA

Query:  DGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN
        DG  I S  ++L      +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Subjt:  DGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN

Query:  VFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT
        + MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQT
Subjt:  VFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT

Query:  ERLNQVLEDMLRACALEFP
        ER NQ +E +LR      P
Subjt:  ERLNQVLEDMLRACALEFP

P0CT41 Transposon Tf2-12 polyprotein3.3e-6931.21Show/hide
Query:  VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGS
        V F+G+ +S+   +     I+ V  W +P    E+  FLG   Y R F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S  
Subjt:  VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGS

Query:  FVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLEL
         ++ +DAS   +  VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   
Subjt:  FVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLEL

Query:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLV------EKRGLAEAGQA
        ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+      +KR        
Subjt:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLV------EKRGLAEAGQA

Query:  DGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN
        DG  I S  ++L      +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Subjt:  DGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN

Query:  VFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT
        + MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQT
Subjt:  VFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT

Query:  ERLNQVLEDMLRACALEFP
        ER NQ +E +LR      P
Subjt:  ERLNQVLEDMLRACALEFP

Q9UR07 Transposon Tf2-11 polyprotein3.3e-6931.21Show/hide
Query:  VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGS
        V F+G+ +S+   +     I+ V  W +P    E+  FLG   Y R F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S  
Subjt:  VSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGSGS

Query:  FVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLEL
         ++ +DAS   +  VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   
Subjt:  FVIYSDASKKGLSCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLEL

Query:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLV------EKRGLAEAGQA
        ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+      +KR        
Subjt:  VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLV------EKRGLAEAGQA

Query:  DGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN
        DG  I S  ++L      +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Subjt:  DGFSIYSDGELLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN

Query:  VFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT
        + MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQT
Subjt:  VFMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT

Query:  ERLNQVLEDMLRACALEFP
        ER NQ +E +LR      P
Subjt:  ERLNQVLEDMLRACALEFP

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein5.5e-1939.67Show/hide
Query:  VSFLG--HVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGS
        +++LG  H++S   VS DPAK+EA+ GW  P   +E+  FLGL GYYR FV+N+ +I  PLT+L +K +   W+     +F+ LK  + T PVL +PD  
Subjt:  VSFLG--HVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQNLKQKLVTAPVLTVPDGS

Query:  GSFVIYSDASKKGLSCVLMQQ
          FV  +   K   SC + ++
Subjt:  GSFVIYSDASKKGLSCVLMQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTCCTTTCTGGGCCACGTGGT
TTCTAAGGCCGAAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTTGTAGCTTTCTGGGTTTAGCAGGTTATT
ATCGATGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAACGCATGTGAGGACAGTTTCCAGAAC
CTTAAACAGAAGCTAGTTACCGCGCCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGATTGAGTTGTGTTTTGATGCA
ACAGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTGAAAATATGGA
GGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTA
GTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACTCGACAGGC
CCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTG
GTGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGATGGGTTCTCCATATACTCTGATGGTGAACTTTTGTTTGAGAGACGC
CTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTGTCTGAGGCTCACAGTTCCCCATTCTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCG
GGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTACTACAAC
CCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTTCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTT
ACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCGGAGATAGTGATATTACATGGAGTGCCAGTGTCGATTGT
TTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGA
CTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAAT
GTTGTAGATCCTCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTCCTTTCTGGGCCACGTGGT
TTCTAAGGCCGAAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTTGTAGCTTTCTGGGTTTAGCAGGTTATT
ATCGATGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAACGCATGTGAGGACAGTTTCCAGAAC
CTTAAACAGAAGCTAGTTACCGCGCCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGATTGAGTTGTGTTTTGATGCA
ACAGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTGAAAATATGGA
GGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTA
GTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACTCGACAGGC
CCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTG
GTGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGATGGGTTCTCCATATACTCTGATGGTGAACTTTTGTTTGAGAGACGC
CTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTGTCTGAGGCTCACAGTTCCCCATTCTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCG
GGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTACTACAAC
CCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTTCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTT
ACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCGGAGATAGTGATATTACATGGAGTGCCAGTGTCGATTGT
TTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGA
CTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAAT
GTTGTAGATCCTCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGA
Protein sequenceShow/hide protein sequence
MSFGLTNAPAVFMDLMNRVFREFLDTFVIVSFLGHVVSKAEVSVDPAKIEAVTGWTRPSTVSEVCSFLGLAGYYRWFVENFSRIATPLTQLTRKGAPFVWSNACEDSFQN
LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLEL
VKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQADGFSIYSDGELLFERR
LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVFMDFITGLPRTLRGFTVIWVVVDRL
TKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPVIRLLLAWHHLRPCTAN
VVDPRFAGVRWVSRD