| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0039192.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.8e-176 | 91.33 | Show/hide |
Query: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
MKASKLLSQGTWGILASVVD RE EVSLSSEPVVREYPDVFPDEL GLPPPRE+DFAIELE GT PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Query: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
PWGA+VLFVKKKDGSM LCIDYRELNKVTVKN PLPRIDDLFDQLQGAT+FSKIDLRSGYHQLRIRDS+I KTAFRSRY HYEFIVMSFGLTNAPAVFM
Subjt: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
Query: DFDEQSVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTRKGTPFVW
D + VLET RANKLYAKFSKCEFWLKKVTFL HVVSS VSVDPAKIEAVT+WPRPSTVSEIR FLGL GYYRRFVEDFSRIA+PLTQLTRKGTPFVW
Subjt: DFDEQSVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTRKGTPFVW
Query: SPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
SPACESSFQELK+KLV+APVLTVPDGSGSFVIYSDASKKGL CVLM
Subjt: SPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
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| KAA0040409.1 pol protein [Cucumis melo var. makuwa] | 2.6e-175 | 88.42 | Show/hide |
Query: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
MKASKLLSQGTWGILASVVD REPEVSLSSEPVVREYPDVFPD+L GLPPPRE+DFAIELE GT PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Query: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
PWGA VLFVKKKDGSM LCIDYRELNKVTVKNR PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD +IPKTAFRSRY HYEF+VMSFGLTNAPAVFM
Subjt: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
Query: DFDEQS--------VLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLT
D ++ VLET RANKLYAKFSKCEFWL+KVTFL HVVSS VSVDPAKIEAVT+WPRPSTVSEIRSFLGL GYYR FVEDFSRIA+PLTQLT
Subjt: DFDEQS--------VLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLT
Query: RKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
RKGTPFVWS ACE SFQELK+KLV+A VLTVPDGSG+FVIYSDASKKGLGCVLM
Subjt: RKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
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| KAA0058812.1 pol protein [Cucumis melo var. makuwa] | 2.6e-175 | 83.6 | Show/hide |
Query: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
MKASKLLSQGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DFAIELE GT PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Query: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
PWGA VLFVKKKDGSM LCIDYRELNKVT+KNR PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD +IPKTAF SRY HYEF+VMSFGLTNAPAVFM
Subjt: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
Query: DFDEQ--------------------------------SVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFL
D + VLET RANKLYAKFSKCEFWL+KVTFL HVVSS VSVDPAKIEAVT+WPRPSTVSEIRSFL
Subjt: DFDEQ--------------------------------SVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFL
Query: GLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
GL GYYRRFVEDFSRIA+PLTQLTRKGTPFVWSPACESSFQELK+KLV+APVLTVPDGSG+FVIYSDASKKGLGCVLM
Subjt: GLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
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| KAA0060745.1 pol protein [Cucumis melo var. makuwa] | 2.6e-175 | 83.86 | Show/hide |
Query: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
MKASKLLSQGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DFAIELE GT PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Query: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
PWGA VLFVKKKDGSM LCIDYRELNKVTVKNR PLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD +IPKTAFRSRY HYEF+VMSFGLTNAPAVFM
Subjt: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
Query: DFDEQ--------------------------------SVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFL
D + VLET RANKLYAKFSKCEFWL+KVTFL HVVSS VSVDPAKIEAVT+WPRPSTVSEIRSFL
Subjt: DFDEQ--------------------------------SVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFL
Query: GLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
GL GYYRRFVEDFSRIA+PLTQLTRKGTPFVWSPACESSFQELK+KLV APVLTVPDGSG+FVIYSDASKKGLGCVLM
Subjt: GLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
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| TYK05193.1 pol protein [Cucumis melo var. makuwa] | 1.5e-175 | 83.86 | Show/hide |
Query: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
MKASKLLSQGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DFAIELE GT PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Query: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
PWGA VLFVKKKDGSM LCIDYRELNKVTVKNR PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD +IPKTAFRSRY HYEF+VMSFGLTNAPAVFM
Subjt: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
Query: DFDEQ--------------------------------SVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFL
D + VLET RANKLYAKFSKCEFWL+KVTFL HVVSS VSVDP KIEAVT+WPRPSTVSEIRSFL
Subjt: DFDEQ--------------------------------SVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFL
Query: GLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
GL GYYRRFVEDFSRIA+PLTQLTRKGTPFVWSPACESSFQELK+KLV+APVLTVPDGSG+FVIYSDASKKGLGCVLM
Subjt: GLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7T6S9 Reverse transcriptase | 8.8e-177 | 91.33 | Show/hide |
Query: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
MKASKLLSQGTWGILASVVD RE EVSLSSEPVVREYPDVFPDEL GLPPPRE+DFAIELE GT PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Query: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
PWGA+VLFVKKKDGSM LCIDYRELNKVTVKN PLPRIDDLFDQLQGAT+FSKIDLRSGYHQLRIRDS+I KTAFRSRY HYEFIVMSFGLTNAPAVFM
Subjt: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
Query: DFDEQSVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTRKGTPFVW
D + VLET RANKLYAKFSKCEFWLKKVTFL HVVSS VSVDPAKIEAVT+WPRPSTVSEIR FLGL GYYRRFVEDFSRIA+PLTQLTRKGTPFVW
Subjt: DFDEQSVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTRKGTPFVW
Query: SPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
SPACESSFQELK+KLV+APVLTVPDGSGSFVIYSDASKKGL CVLM
Subjt: SPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
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| A0A5A7TGL7 Pol protein | 1.3e-175 | 88.42 | Show/hide |
Query: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
MKASKLLSQGTWGILASVVD REPEVSLSSEPVVREYPDVFPD+L GLPPPRE+DFAIELE GT PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Query: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
PWGA VLFVKKKDGSM LCIDYRELNKVTVKNR PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD +IPKTAFRSRY HYEF+VMSFGLTNAPAVFM
Subjt: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
Query: DFDEQS--------VLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLT
D ++ VLET RANKLYAKFSKCEFWL+KVTFL HVVSS VSVDPAKIEAVT+WPRPSTVSEIRSFLGL GYYR FVEDFSRIA+PLTQLT
Subjt: DFDEQS--------VLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLT
Query: RKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
RKGTPFVWS ACE SFQELK+KLV+A VLTVPDGSG+FVIYSDASKKGLGCVLM
Subjt: RKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
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| A0A5A7USG7 Reverse transcriptase | 1.3e-175 | 83.6 | Show/hide |
Query: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
MKASKLLSQGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DFAIELE GT PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Query: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
PWGA VLFVKKKDGSM LCIDYRELNKVT+KNR PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD +IPKTAF SRY HYEF+VMSFGLTNAPAVFM
Subjt: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
Query: DFDEQ--------------------------------SVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFL
D + VLET RANKLYAKFSKCEFWL+KVTFL HVVSS VSVDPAKIEAVT+WPRPSTVSEIRSFL
Subjt: DFDEQ--------------------------------SVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFL
Query: GLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
GL GYYRRFVEDFSRIA+PLTQLTRKGTPFVWSPACESSFQELK+KLV+APVLTVPDGSG+FVIYSDASKKGLGCVLM
Subjt: GLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
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| A0A5A7V4E4 Reverse transcriptase | 1.3e-175 | 83.86 | Show/hide |
Query: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
MKASKLLSQGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DFAIELE GT PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Query: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
PWGA VLFVKKKDGSM LCIDYRELNKVTVKNR PLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD +IPKTAFRSRY HYEF+VMSFGLTNAPAVFM
Subjt: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
Query: DFDEQ--------------------------------SVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFL
D + VLET RANKLYAKFSKCEFWL+KVTFL HVVSS VSVDPAKIEAVT+WPRPSTVSEIRSFL
Subjt: DFDEQ--------------------------------SVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFL
Query: GLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
GL GYYRRFVEDFSRIA+PLTQLTRKGTPFVWSPACESSFQELK+KLV APVLTVPDGSG+FVIYSDASKKGLGCVLM
Subjt: GLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
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| A0A5D3BZN1 Reverse transcriptase | 7.5e-176 | 83.86 | Show/hide |
Query: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
MKASKLLSQGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DFAIELE GT PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt: MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELRGLPPPREIDFAIELELGTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Query: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
PWGA VLFVKKKDGSM LCIDYRELNKVTVKNR PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD +IPKTAFRSRY HYEF+VMSFGLTNAPAVFM
Subjt: PWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM
Query: DFDEQ--------------------------------SVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFL
D + VLET RANKLYAKFSKCEFWL+KVTFL HVVSS VSVDP KIEAVT+WPRPSTVSEIRSFL
Subjt: DFDEQ--------------------------------SVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFL
Query: GLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
GL GYYRRFVEDFSRIA+PLTQLTRKGTPFVWSPACESSFQELK+KLV+APVLTVPDGSG+FVIYSDASKKGLGCVLM
Subjt: GLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLM
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.8e-49 | 35.26 | Show/hide |
Query: YRMAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFV-KKKDGS----MSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI
Y A +E++ Q+Q++L++G IR S SP+ + + V KK+D S + IDYR+LN++TV +R P+P +D++ +L F+ IDL G+HQ+ +
Subjt: YRMAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFV-KKKDGS----MSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI
Query: RDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVF-----------------------------MDFDEQS---VLETFRANKLYAKFSKCEFWLKKVTFLN
++ KTAF +++ HYE++ M FGL NAPA F +D QS V E L + KCEF ++ TFL
Subjt: RDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVF-----------------------------MDFDEQS---VLETFRANKLYAKFSKCEFWLKKVTFLN
Query: HVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTRKGTPF-VWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIY
HV++ + +P KIEA+ +P P+ EI++FLGL GYYR+F+ +F+ IA P+T+ +K +P +S+F++LK + P+L VPD + F +
Subjt: HVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTRKGTPF-VWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIY
Query: SDASKKGLGCVL
+DAS LG VL
Subjt: SDASKKGLGCVL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 9.8e-48 | 33.54 | Show/hide |
Query: TPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMS-----LCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRS
+PI Y +A E++ Q+QE+L++G IR S SP+ + V KK + + IDYR+LN++T+ +R P+P +D++ +L F+ IDL
Subjt: TPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKKDGSMS-----LCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRS
Query: GYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVF-----------------MDFDE---------------QSVLETFRANKLYAKFSKCEFWL
G+HQ+ + + +I KTAF ++ HYE++ M FGL NAPA F + D+ Q V L + KCEF
Subjt: GYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVF-----------------MDFDE---------------QSVLETFRANKLYAKFSKCEFWL
Query: KKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTRKGTPF-VWSPACESSFQELKRKLVSAPVLTVPDG
K+ FL H+V+ + +P K++A+ S+P P+ EIR+FLGL GYYR+F+ +++ IA P+T +K T +F++LK ++ P+L +PD
Subjt: KKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTRKGTPF-VWSPACESSFQELKRKLVSAPVLTVPDG
Query: SGSFVIYSDASKKGLGCVL
FV+ +DAS LG VL
Subjt: SGSFVIYSDASKKGLGCVL
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 8.8e-49 | 31.03 | Show/hide |
Query: KASKLLSQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELRGLPPPREIDF-------AIELELGTTPISRAPYRMAPAELKELKVQ
+AS L G + + S + + EP + S + ++Y ++ ++L PPR D IE++ G PY + +E+
Subjt: KASKLLSQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELRGLPPPREIDF-------AIELELGTTPISRAPYRMAPAELKELKVQ
Query: LQELLDKGFIRPSVSPWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEF
+Q+LLD FI PS SP + V+ V KKDG+ LC+DYR LNK T+ + PLPRID+L ++ A +F+ +DL SGYHQ+ + + KTAF + YE+
Subjt: LQELLDKGFIRPSVSPWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEF
Query: IVMSFGLTNAPAVF---------------------MDFDE---------QSVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSW
VM FGL NAP+ F + F E +VLE + L K KC+F ++ FL + + +++ K A+ +
Subjt: IVMSFGLTNAPAVF---------------------MDFDE---------QSVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSW
Query: PRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVL
P P TV + + FLG++ YYRRF+ + S+IA P+ + W+ + + ++LK L ++PVL + ++ + +DASK G+G VL
Subjt: PRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVL
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 4.1e-46 | 30.75 | Show/hide |
Query: EYPDVFPDELRGLPPPREIDFAIELELGTT---PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKK-----DGSMSLCIDYRELNK
E+P +F L G+ ++ A++ E+ T PI Y E++ Q+ ELL G IRPS SP+ + + V KK + + +D++ LN
Subjt: EYPDVFPDELRGLPPPREIDFAIELELGTT---PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGASVLFVKKK-----DGSMSLCIDYRELNK
Query: VTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM---------------------------
VT+ + P+P I+ L A F+ +DL SG+HQ+ +++S+IPKTAF + YEF+ + FGL NAPA+F
Subjt: VTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEFIVMSFGLTNAPAVFM---------------------------
Query: DFDE-----QSVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTR--
D+D + VL + L K F +V FL ++V++ + DP K+ A++ P P++V E++ FLG+ YYR+F++D++++A PLT LTR
Subjt: DFDE-----QSVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSWPRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTR--
Query: ---------KGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVL
P SF +LK L S+ +L P + F + +DAS +G VL
Subjt: ---------KGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 2.0e-48 | 31.03 | Show/hide |
Query: KASKLLSQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELRGLPPPREIDF-------AIELELGTTPISRAPYRMAPAELKELKVQ
+AS L G + + S + + EP + S + ++Y ++ ++L PPR D IE++ G PY + +E+
Subjt: KASKLLSQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELRGLPPPREIDF-------AIELELGTTPISRAPYRMAPAELKELKVQ
Query: LQELLDKGFIRPSVSPWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEF
+Q+LLD FI PS SP + V+ V KKDG+ LC+DYR LNK T+ + PLPRID+L ++ A +F+ +DL SGYHQ+ + + KTAF + YE+
Subjt: LQELLDKGFIRPSVSPWGASVLFVKKKDGSMSLCIDYRELNKVTVKNRCPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSNIPKTAFRSRYRHYEF
Query: IVMSFGLTNAPAVF---------------------MDFDE---------QSVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSW
VM FGL NAP+ F + F E +VLE + L K KC+F ++ FL + + +++ K A+ +
Subjt: IVMSFGLTNAPAVF---------------------MDFDE---------QSVLETFRANKLYAKFSKCEFWLKKVTFLNHVVSSGRVSVDPAKIEAVTSW
Query: PRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVL
P P TV + + FLG++ YYRRF+ + S+IA P+ + W+ + + +LK L ++PVL + ++ + +DASK G+G VL
Subjt: PRPSTVSEIRSFLGLVGYYRRFVEDFSRIANPLTQLTRKGTPFVWSPACESSFQELKRKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVL
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