| GenBank top hits | e value | %identity | Alignment |
|---|
| AAK84483.1 putative copia-like polyprotein [Solanum lycopersicum] | 2.0e-175 | 67.18 | Show/hide |
Query: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
MR KL +S+WGHAILHA +L+RIRPT+YH++SP QL +GQEPNISHLR+FGCAVYVPI+PPQRTKMGPQRRLGIYVG++SPSII+YLEP+TGD+F RFA
Subjt: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
Query: DCHFNETNFPTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRRKR
DCHF+E+ +PTLGG K L EI WN S LSHLDPRT QCE EVQ+II+LQ++ANQ+PDAFT+ ++TKSYIPA NAP ++IPT Q+ NES KR
Subjt: DCHFNETNFPTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRRKR
Query: GRPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEETQV-YEDHNEISINYTMTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKC
GRP+GSKDKNPRKRK N ++D ++E D T +E +V +NEIS+NY T K WNR NVV+DNIFAYNV I+ ++ED EPKS+ +C
Subjt: GRPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEETQV-YEDHNEISINYTMTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKC
Query: RNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENL
R R DWPKWK+ IQ EL SL KRE FGP++ TP+G+KPVG+KWIFVRKRNE EV RYKARLVAQGFSQRP ID+ ETYSPVV+AIT RYLI+LAV E L
Subjt: RNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENL
Query: DMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
+M LMDVVTAYLYGSL++ I+MKIPE FK+P++Y +S E CSIKLQ+SLYGLKQSG
Subjt: DMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
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| AQY61300.1 Pol [Coffea eugenioides] | 6.1e-172 | 64.69 | Show/hide |
Query: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
MR+KLP S WGHAILHA +L+RIRPT+YH YSP QL +G EPNISHLRIFGCAVYVPI+PPQR K+ PQRRLGIYVG++SPSII+Y+EPLTGD+FTARFA
Subjt: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
Query: DCHFNETNFPTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRRKR
DCHF+E++FPTLGG + + EI W +S L+ LD RTK+CELEVQ+IIHLQ +ANQ+PDAF D+K+VTKS+IPA NAP I++P Q+ + NES R KR
Subjt: DCHFNETNFPTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRRKR
Query: GRPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEETQVYEDHNEISINYTMTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCR
GRP+GSKDKNPRK++ ++ I +KI E + E SIN+ + K WNR +++DNIFAYN+ +I+ E+ED+EP+S+D+CR
Subjt: GRPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEETQVYEDHNEISINYTMTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCR
Query: NRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLD
R DWPKWK+ IQ EL+SL KR+VFGPVV TP+GVKPVG+KW+FVRKRNE NE+ RYKARLVAQGFSQRP D++ETYSPVV+AIT RYL+S AV E LD
Subjt: NRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLD
Query: MHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
M LMDVVTAYLYG+LEN+IY++IPEGF +P++ SN + SIKLQRSLYGLKQSG
Subjt: MHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
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| RVW26456.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 4.7e-172 | 63.04 | Show/hide |
Query: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
M+ KLP S WGHAI+HA +L+RIRPT+YH+YSP+QL G++PNISHLRIFGCAVYVPI+P QRTKMGPQRRLG+YVGF SPSII+YLEPLTGDVFTARFA
Subjt: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
Query: DCHFNETNFPTLG--GGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRR
DCHFNE+ FP+LG I + EI+W S ++HLDPRT QCELEVQ+IIHLQ++ NQ+PDAF DTKKVTKS+IPAAN P+ I++P Q+ NES +R
Subjt: DCHFNETNFPTLG--GGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRR
Query: KRGRPMGSKDKNPRKRKVTNSRNDL-----------------IENRNIQEKI-------MDTTSGKNV-----EETQVYEDHNEISINYTMTGKRWNRIN
KRGRP+GSKD PRKR+ L +E I +K +T ++ EE QV E + EIS++Y TG++W+R N
Subjt: KRGRPMGSKDKNPRKRKVTNSRNDL-----------------IENRNIQEKI-------MDTTSGKNV-----EETQVYEDHNEISINYTMTGKRWNRIN
Query: VVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQR
+V++NIFA+ V +II +ED EP+++++CR+R DWPKWKE IQ ELNSLTKREVFGPVV TP+ VKPVG+KW+FVRKRNENNE+ RYKARLVAQGFSQR
Subjt: VVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQR
Query: PDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
P ID+EETYSPV++AIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P + N+ + SIKLQRSLYGLKQSG
Subjt: PDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
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| RVW50867.1 Copia protein [Vitis vinifera] | 4.7e-172 | 62.17 | Show/hide |
Query: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
M+ KLP S WGHAI+HA +L+RIRPT+YH+YSP+QL G++PNISHLRIFGCAVYVPI+P QRTKMGPQRRLG+YVGF SPSIIRYLEPLTGDVFTARFA
Subjt: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
Query: DCHFNETNFPTLG--GGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRR
DCHFNE+ FP+LG I + EI+W S ++HLDPRT QCELEVQ+IIHLQ++ANQ+PDAF DTKKVTKS+IPAAN P+ I++P Q+ NES +R
Subjt: DCHFNETNFPTLG--GGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRR
Query: KRGRPMGSKDKNPRKRKVTNSRNDL-----------------IENRNIQEKI-----------------MDTTSGKNV-----EETQVYEDHNEISINYT
KRGRP+GSKD PRKR+ + L +E I +K +T+ ++ EE QV E + EIS++Y
Subjt: KRGRPMGSKDKNPRKRKVTNSRNDL-----------------IENRNIQEKI-----------------MDTTSGKNV-----EETQVYEDHNEISINYT
Query: MTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKA
TG++W+R N+V++NIFA+ V +II +ED EP+++++CR+R DWPKWKE IQ ELNSLTKREVFGPVV TP+ VKPVG+KW+FVRKRNENNE+ RYKA
Subjt: MTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKA
Query: RLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
RLVAQGFSQRP ID+EETYSPV++AIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P + N+ + SIKLQRSLYGLKQSG
Subjt: RLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
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| RVX16158.1 Copia protein [Vitis vinifera] | 4.7e-172 | 62.17 | Show/hide |
Query: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
M+ KLP S WGHAI+HA +L+RIRPT+YH+YSP+QL G++PNISHLRIFGCAVYVPI+P QRTKMGPQRRLG+YVGF SPSIIRYLEPLTGDVFTARFA
Subjt: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
Query: DCHFNETNFPTLG--GGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRR
DCHFNE+ FP+LG I + EI+W S ++HLDPRT QCELEVQ+IIHLQ++ANQ+PDAF DTKKVTKS+IPAAN P+ I++P Q+ NES +R
Subjt: DCHFNETNFPTLG--GGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRR
Query: KRGRPMGSKDKNPRKRKVTNSRNDL-----------------IENRNIQEKI-----------------MDTTSGKNV-----EETQVYEDHNEISINYT
KRGRP+GSKD PRKR+ + L +E I +K +T+ ++ EE QV E + EIS++Y
Subjt: KRGRPMGSKDKNPRKRKVTNSRNDL-----------------IENRNIQEKI-----------------MDTTSGKNV-----EETQVYEDHNEISINYT
Query: MTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKA
TG++W+R N+V++NIFA+ V +II +ED EP+++++CR+R DWPKWKE IQ ELNSLTKREVFGPVV TP+ VKPVG+KW+FVRKRNENNE+ RYKA
Subjt: MTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKA
Query: RLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
RLVAQGFSQRP ID+EETYSPV++AIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P + N+ + SIKLQRSLYGLKQSG
Subjt: RLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1U9WYB0 Pol | 3.0e-172 | 64.69 | Show/hide |
Query: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
MR+KLP S WGHAILHA +L+RIRPT+YH YSP QL +G EPNISHLRIFGCAVYVPI+PPQR K+ PQRRLGIYVG++SPSII+Y+EPLTGD+FTARFA
Subjt: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
Query: DCHFNETNFPTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRRKR
DCHF+E++FPTLGG + + EI W +S L+ LD RTK+CELEVQ+IIHLQ +ANQ+PDAF D+K+VTKS+IPA NAP I++P Q+ + NES R KR
Subjt: DCHFNETNFPTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRRKR
Query: GRPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEETQVYEDHNEISINYTMTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCR
GRP+GSKDKNPRK++ ++ I +KI E + E SIN+ + K WNR +++DNIFAYN+ +I+ E+ED+EP+S+D+CR
Subjt: GRPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEETQVYEDHNEISINYTMTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCR
Query: NRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLD
R DWPKWK+ IQ EL+SL KR+VFGPVV TP+GVKPVG+KW+FVRKRNE NE+ RYKARLVAQGFSQRP D++ETYSPVV+AIT RYL+S AV E LD
Subjt: NRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLD
Query: MHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
M LMDVVTAYLYG+LEN+IY++IPEGF +P++ SN + SIKLQRSLYGLKQSG
Subjt: MHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
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| A0A438CTC8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-172 | 63.04 | Show/hide |
Query: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
M+ KLP S WGHAI+HA +L+RIRPT+YH+YSP+QL G++PNISHLRIFGCAVYVPI+P QRTKMGPQRRLG+YVGF SPSII+YLEPLTGDVFTARFA
Subjt: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
Query: DCHFNETNFPTLG--GGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRR
DCHFNE+ FP+LG I + EI+W S ++HLDPRT QCELEVQ+IIHLQ++ NQ+PDAF DTKKVTKS+IPAAN P+ I++P Q+ NES +R
Subjt: DCHFNETNFPTLG--GGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRR
Query: KRGRPMGSKDKNPRKRKVTNSRNDL-----------------IENRNIQEKI-------MDTTSGKNV-----EETQVYEDHNEISINYTMTGKRWNRIN
KRGRP+GSKD PRKR+ L +E I +K +T ++ EE QV E + EIS++Y TG++W+R N
Subjt: KRGRPMGSKDKNPRKRKVTNSRNDL-----------------IENRNIQEKI-------MDTTSGKNV-----EETQVYEDHNEISINYTMTGKRWNRIN
Query: VVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQR
+V++NIFA+ V +II +ED EP+++++CR+R DWPKWKE IQ ELNSLTKREVFGPVV TP+ VKPVG+KW+FVRKRNENNE+ RYKARLVAQGFSQR
Subjt: VVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQR
Query: PDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
P ID+EETYSPV++AIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P + N+ + SIKLQRSLYGLKQSG
Subjt: PDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
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| A0A438ET65 Copia protein | 2.3e-172 | 62.17 | Show/hide |
Query: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
M+ KLP S WGHAI+HA +L+RIRPT+YH+YSP+QL G++PNISHLRIFGCAVYVPI+P QRTKMGPQRRLG+YVGF SPSIIRYLEPLTGDVFTARFA
Subjt: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
Query: DCHFNETNFPTLG--GGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRR
DCHFNE+ FP+LG I + EI+W S ++HLDPRT QCELEVQ+IIHLQ++ANQ+PDAF DTKKVTKS+IPAAN P+ I++P Q+ NES +R
Subjt: DCHFNETNFPTLG--GGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRR
Query: KRGRPMGSKDKNPRKRKVTNSRNDL-----------------IENRNIQEKI-----------------MDTTSGKNV-----EETQVYEDHNEISINYT
KRGRP+GSKD PRKR+ + L +E I +K +T+ ++ EE QV E + EIS++Y
Subjt: KRGRPMGSKDKNPRKRKVTNSRNDL-----------------IENRNIQEKI-----------------MDTTSGKNV-----EETQVYEDHNEISINYT
Query: MTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKA
TG++W+R N+V++NIFA+ V +II +ED EP+++++CR+R DWPKWKE IQ ELNSLTKREVFGPVV TP+ VKPVG+KW+FVRKRNENNE+ RYKA
Subjt: MTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKA
Query: RLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
RLVAQGFSQRP ID+EETYSPV++AIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P + N+ + SIKLQRSLYGLKQSG
Subjt: RLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
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| A0A438K4P3 Copia protein | 2.3e-172 | 62.17 | Show/hide |
Query: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
M+ KLP S WGHAI+HA +L+RIRPT+YH+YSP+QL G++PNISHLRIFGCAVYVPI+P QRTKMGPQRRLG+YVGF SPSIIRYLEPLTGDVFTARFA
Subjt: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
Query: DCHFNETNFPTLG--GGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRR
DCHFNE+ FP+LG I + EI+W S ++HLDPRT QCELEVQ+IIHLQ++ANQ+PDAF DTKKVTKS+IPAAN P+ I++P Q+ NES +R
Subjt: DCHFNETNFPTLG--GGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRR
Query: KRGRPMGSKDKNPRKRKVTNSRNDL-----------------IENRNIQEKI-----------------MDTTSGKNV-----EETQVYEDHNEISINYT
KRGRP+GSKD PRKR+ + L +E I +K +T+ ++ EE QV E + EIS++Y
Subjt: KRGRPMGSKDKNPRKRKVTNSRNDL-----------------IENRNIQEKI-----------------MDTTSGKNV-----EETQVYEDHNEISINYT
Query: MTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKA
TG++W+R N+V++NIFA+ V +II +ED EP+++++CR+R DWPKWKE IQ ELNSLTKREVFGPVV TP+ VKPVG+KW+FVRKRNENNE+ RYKA
Subjt: MTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKA
Query: RLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
RLVAQGFSQRP ID+EETYSPV++AIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P + N+ + SIKLQRSLYGLKQSG
Subjt: RLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
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| Q949J4 Putative copia-like polyprotein | 9.9e-176 | 67.18 | Show/hide |
Query: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
MR KL +S+WGHAILHA +L+RIRPT+YH++SP QL +GQEPNISHLR+FGCAVYVPI+PPQRTKMGPQRRLGIYVG++SPSII+YLEP+TGD+F RFA
Subjt: MRAKLPLSIWGHAILHAVSLIRIRPTSYHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARFA
Query: DCHFNETNFPTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRRKR
DCHF+E+ +PTLGG K L EI WN S LSHLDPRT QCE EVQ+II+LQ++ANQ+PDAFT+ ++TKSYIPA NAP ++IPT Q+ NES KR
Subjt: DCHFNETNFPTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRRKR
Query: GRPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEETQV-YEDHNEISINYTMTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKC
GRP+GSKDKNPRKRK N ++D ++E D T +E +V +NEIS+NY T K WNR NVV+DNIFAYNV I+ ++ED EPKS+ +C
Subjt: GRPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEETQV-YEDHNEISINYTMTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKC
Query: RNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENL
R R DWPKWK+ IQ EL SL KRE FGP++ TP+G+KPVG+KWIFVRKRNE EV RYKARLVAQGFSQRP ID+ ETYSPVV+AIT RYLI+LAV E L
Subjt: RNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENL
Query: DMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
+M LMDVVTAYLYGSL++ I+MKIPE FK+P++Y +S E CSIKLQ+SLYGLKQSG
Subjt: DMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQSG
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.4e-33 | 28.96 | Show/hide |
Query: AKLPLSIWGHAILHAVSLIRIRPTSY---HKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARF
AKL S WG A+L A LI P+ +P ++ + ++P + HLR+FG VYV I Q K + I+VG++ P+ + + + AR
Subjt: AKLPLSIWGHAILHAVSLIRIRPTSY---HKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSIIRYLEPLTGDVFTARF
Query: ADCHFNETN--------FPTLG-GGIKKLENEIAWNVS---LLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIP-----AANAPSIIE
D +ETN F T+ K+ EN+ N S + + +K+C+ +Q + S ++ + D++K+ ++ P N + +
Subjt: ADCHFNETN--------FPTLG-GGIKKLENEIAWNVS---LLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIP-----AANAPSIIE
Query: IPTQQVDTINESTLRRKRGRPMGSKDK-NPRKRKVTNSRNDLIE------NRNIQEKIMDTTSGKNVEETQVYEDHNEISINYTMTGKRWNRINVVVDNI
+NES R++ SK NP + + + + L E +N +I++ S + + Q+ +NE N +N VV N
Subjt: IPTQQVDTINESTLRRKRGRPMGSKDK-NPRKRKVTNSRNDLIE------NRNIQEKIMDTTSGKNVEETQVYEDHNEISINYTMTGKRWNRINVVVDNI
Query: FAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFE
H I ++ P S D+ + R D W+E I ELN+ + + P+ V +W+F K NE RYKARLVA+GF+Q+ ID+E
Subjt: FAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFE
Query: ETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQS
ET++PV + R+++SL + NL +H MDV TA+L G+L+ EIYM++P+G + NS +C KL +++YGLKQ+
Subjt: ETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQS
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-33 | 26.15 | Show/hide |
Query: AKLPLSIWGHAILHAVSLIRIRPTSYHKYS-PTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSI-IRYLEPLTGDVFTARFA
AKLP S WG A+ A LI P+ + P ++ +E + SHL++FGC + + QRTK+ + I++G+ R +P+ V +R
Subjt: AKLPLSIWGHAILHAVSLIRIRPTSYHKYS-PTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFKSPSI-IRYLEPLTGDVFTARFA
Query: DCHFNETNFPTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRRKR
D F E+ T +K++N I + + + S +N A + T +V++ E + V+ + T ++
Subjt: DCHFNETNFPTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSIIEIPTQQVDTINESTLRRKR
Query: GRPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEETQVYEDHNEISINYTMTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCR
+P+ + + PR +E+R S Y + ++D EP+S+ +
Subjt: GRPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEETQVYEDHNEISINYTMTGKRWNRINVVVDNIFAYNVVHNIIHENEDYEPKSIDKCR
Query: NRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLD
+ + + + +Q E+ SL K + +V PKG +P+ KW+F K++ + ++ RYKARLV +GF Q+ IDF+E +SPVV ++R ++SLA +L+
Subjt: NRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFEETYSPVVNAITLRYLISLAVCENLD
Query: MHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQS
+ +DV TA+L+G LE EIYM+ PEGF++ + +C KL +SLYGLKQ+
Subjt: MHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQS
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.1e-10 | 39.81 | Show/hide |
Query: EPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFEETYSPVVNAITLRYLI
EPKS+ KD P W + +Q EL++L++ + + +V P +G KW+F K + + + R KARLVA+GF Q I F ETYSPVV T+R ++
Subjt: EPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDFEETYSPVVNAITLRYLI
Query: SLA
++A
Subjt: SLA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.6e-29 | 25.67 | Show/hide |
Query: AKLPLSIWGHAILHAVSLIRIRPTSYHKY-SPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFK-SPSIIRYLEPLTGDVFTA---
A +P + W +A AV LI PT + SP Q +G PN LR+FGCA Y + P + K+ + R +++G+ + S L T ++ +
Subjt: AKLPLSIWGHAILHAVSLIRIRPTSYHKY-SPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFK-SPSIIRYLEPLTGDVFTA---
Query: RFADCHFNETNFPTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYI----------------PAANAPSII
RF + F +N+ +++ E + S + L RT H + P A +V+ S + P N P
Subjt: RFADCHFNETNFPTLGGGIKKLENEIAWNVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYI----------------PAANAPSII
Query: EIPTQQVDTINESTLRRKRGRPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEET-------------QVYEDHNEISINYTMTGKRWNRI
PT Q T S+ + P N ++ S + ++ + + S + T Q+ ++N+ +N G R +
Subjt: EIPTQQVDTINESTLRRKRGRPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEET-------------QVYEDHNEISINYTMTGKRWNRI
Query: NVVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQ
++ N Y++ ++ E+ EP++ + KD +W+ + E+N+ + V P V VG +WIF +K N + + RYKARLVA+G++Q
Subjt: NVVVDNIFAYNVVHNIIHENEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQ
Query: RPDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQS
RP +D+ ET+SPV+ + ++R ++ +AV + + +DV A+L G+L +++YM P GF I K N + KL+++LYGLKQ+
Subjt: RPDIDFEETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPKSYNSNSIELCSIKLQRSLYGLKQS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.9e-28 | 25.26 | Show/hide |
Query: AKLPLSIWGHAILHAVSLIRIRPTS-YHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFK-SPSIIRYLEPLTGDVFTARFA
A +P + W +A AV LI PT SP Q +GQ PN L++FGCA Y + P R K+ + + ++G+ + S L TG ++T+R
Subjt: AKLPLSIWGHAILHAVSLIRIRPTS-YHKYSPTQLAYGQEPNISHLRIFGCAVYVPISPPQRTKMGPQRRLGIYVGFK-SPSIIRYLEPLTGDVFTARFA
Query: D----CH-FNETNFPTLGGGIKKLENEIAW---------------NVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSI
C F+ TNF ++ ++ W L HLD + + Q ++ +P + + ++ P+ N P
Subjt: D----CH-FNETNFPTLGGGIKKLENEIAW---------------NVSLLSHLDPRTKQCELEVQKIIHLQSVANQMPDAFTDTKKVTKSYIPAANAPSI
Query: IEIPTQQVDTINESTLRRKRG----RPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEE-TQVYEDHNEISINYTMTGKRWNRINVVVDNI
P Q ++ + S + P +P + +S + + +I E ++S + V I +N + D I
Subjt: IEIPTQQVDTINESTLRRKRG----RPMGSKDKNPRKRKVTNSRNDLIENRNIQEKIMDTTSGKNVEE-TQVYEDHNEISINYTMTGKRWNRINVVVDNI
Query: FAYNVVHNIIHE-NEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDF
N ++ + EP++ + KD +W++ + E+N+ + V P V VG +WIF +K N + + RYKARLVA+G++QRP +D+
Subjt: FAYNVVHNIIHE-NEDYEPKSIDKCRNRKDWPKWKEVIQPELNSLTKREVFGPVVYTPKGVKPVGFKWIFVRKRNENNEVTRYKARLVAQGFSQRPDIDF
Query: EETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGF--KIPKSYNSNSIELCSIKLQRSLYGLKQS
ET+SPV+ + ++R ++ +AV + + +DV A+L G+L +E+YM P GF K Y +C +L++++YGLKQ+
Subjt: EETYSPVVNAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPEGF--KIPKSYNSNSIELCSIKLQRSLYGLKQS
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