CuGenDBv2

Gene ID	Cmc08g0222371
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RING-type domain-containing protein
Genome location	CMiso1.1chr08:11058861..11063434
RNA-Seq Expression	Cmc08g0222371
Synteny	Cmc08g0222371
Gene Ontology terms	GO:0070534 - protein K63-linked ubiquitination (biological process) GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004138080.1 E3 ubiquitin-protein ligase RGLG2 [Cucumis sativus]

1.5e-08

97.22

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        MLKNIDRSRKEAEFALAALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

XP_008464499.1 PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X4 [Cucumis melo]

1.5e-08

97.22

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        MLKNIDRSRKEAEFALAALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

XP_016903209.1 PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X1 [Cucumis melo]

1.5e-08

97.22

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        MLKNIDRSRKEAEFALAALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

XP_016903210.1 PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X2 [Cucumis melo]

1.5e-08

97.22

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        MLKNIDRSRKEAEFALAALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

XP_016903211.1 PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X3 [Cucumis melo]

1.5e-08

97.22

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        MLKNIDRSRKEAEFALAALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LP13 RING-type domain-containing protein

7.4e-09

97.22

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        MLKNIDRSRKEAEFALAALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

A0A1S3CLK7 E3 ubiquitin-protein ligase RGLG2-like isoform X4

7.4e-09

97.22

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        MLKNIDRSRKEAEFALAALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

A0A1S4E4Q2 E3 ubiquitin-protein ligase RGLG2-like isoform X3

7.4e-09

97.22

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        MLKNIDRSRKEAEFALAALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

A0A1S4E4Q6 E3 ubiquitin-protein ligase RGLG2-like isoform X1

7.4e-09

97.22

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        MLKNIDRSRKEAEFALAALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

A0A5A7URQ8 E3 ubiquitin-protein ligase RGLG2-like isoform X3

7.4e-09

97.22

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        MLKNIDRSRKEAEFALAALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

SwissProt top hits

e value

%identity

Alignment

Q8LB88 E3 ubiquitin-protein ligase RGLG5

3.2e-09

86.11

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        M KNID +RKEAEFAL+ALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

Q9LY87 E3 ubiquitin-protein ligase RGLG2

1.3e-05

69.44

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        M KN  +S KE EFAL+ALMEIP QYK T+EL LLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

Q9SS90 E3 ubiquitin-protein ligase RGLG1

3.9e-07

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        M KN D+SRKE EFAL+ALMEIP QYK T+EL LLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

Arabidopsis top hits

e value

%identity

Alignment

AT1G67800.1 Copine (Calcium-dependent phospholipid-binding protein) family

2.3e-10

86.11

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        M KNID +RKEAEFAL+ALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

AT1G67800.2 Copine (Calcium-dependent phospholipid-binding protein) family

2.3e-10

86.11

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        M KNID +RKEAEFAL+ALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

AT1G67800.3 Copine (Calcium-dependent phospholipid-binding protein) family

2.3e-10

86.11

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        M KNID +RKEAEFAL+ALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

AT1G67800.4 Copine (Calcium-dependent phospholipid-binding protein) family

2.3e-10

86.11

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        M KNID +RKEAEFAL+ALMEIPSQYK TLELGLLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

AT3G01650.1 RING domain ligase1

2.8e-08

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Query:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG
        M KN D+SRKE EFAL+ALMEIP QYK T+EL LLG
Subjt:  MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLG

Sequences

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CDS sequence

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ATGTTAAAGAATATAGATCGATCCAGAAAGGAAGCAGAATTTGCTCTTGCAGCACTCATGGAAATACCCTCCCAGTACAAAACAACACTGGAGCTTGGTCTTTTGGGGCA
TTTGTGGAGATTCATGTTTTCACAACAAGGTTTTTTGAAACAATATTTCAACTTTAGAAGTTTGGCCAAAATCTCTATGAAATGCAATGATAGGAAAGAGGAAGACCTTT
AA

mRNA sequence

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ATAGTTTTTCAATTTTCTTTCCTTCTCTTCTCAATTGCGCATCTCATTTTATTTTTTTCATTGCGGAAGTTCTGTAACTTTGTGCTGAATTGCAGCAAATATCCCCTGTC
AATTATACTAGTTGGAGTTGGAGATGGGCCTTGGGACATGATGAGGGAATTTGACGACAATATCCCAGCTTGAGCCTTCGATAACTTCCAATTCGTGAATTTCACAAACA
TAATGTTAAAGAATATAGATCGATCCAGAAAGGAAGCAGAATTTGCTCTTGCAGCACTCATGGAAATACCCTCCCAGTACAAAACAACACTGGAGCTTGGTCTTTTGGGG
CATTTGTGGAGATTCATGTTTTCACAACAAGGTTTTTTGAAACAATATTTCAACTTTAGAAGTTTGGCCAAAATCTCTATGAAATGCAATGATAGGAAAGAGGAAGACCT
TTAATAACACGAGAGTGAAGCATAGAGTCAGGGGTCGATTAAAGTGTCCGCGATCAGTAACAAGCTAGCAGATATGATGATTATTCACGAAGGAAATATGGCTAAAAGCC
AATGAAGGTTCTCCACACCCAAGATAATTGAAGTCATATCGGGTTGAAAGCTAAGCGAGTGTGCAGATGGCAAGGCGACCGTTGAAAATTGAAGACTGAGAAGGCGTTTA
GGATTTCTAATTATTTAATTCTTGTATTAGGATCTTTTTTCATGTACTTTTGTAGAATATATATATATAAACACAATATTAAAATTTTATTTTGTGTATTCAAATTTAAA
AGACAAATATTAAAGTTTCTAAAATAATATGAATTTCATTGATTTGTT

Protein sequence

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MLKNIDRSRKEAEFALAALMEIPSQYKTTLELGLLGHLWRFMFSQQGFLKQYFNFRSLAKISMKCNDRKEEDL

Cmc08g0222371 (gene) of Melon (Charmono) v1.1 genome