| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 6.4e-40 | 64.23 | Show/hide |
Query: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
MLKSIRILLSIA FY+Y+IWQMDVKTA LN L + G + + + ++ + ++ LK+ASRSWNI+F+ AIKSYGFEQNVDEP VY+K+VNS
Subjt: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
Query: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
+VAFL+LYVDDILLIGNDV YLTD+KKWL QF+MKD
Subjt: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
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| KAA0061927.1 gag/pol protein [Cucumis melo var. makuwa] | 5.8e-41 | 66.9 | Show/hide |
Query: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
MLKSIRILLSIA FYDY+IWQMDVKTA LN L +G +K + ++ + ++ LK+ASRSWNIKF+ IK+YGFEQNV+EP VY+KVVNS
Subjt: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
Query: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMK---DAQ
IVAFLVLYVDDILLIGNDVGYLTDI+KWLA QF+MK DAQ
Subjt: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMK---DAQ
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| KAA0065369.1 gag/pol protein [Cucumis melo var. makuwa] | 4.9e-40 | 70.8 | Show/hide |
Query: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLHLKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNSI
MLKSIRILLSIA FYDY+IWQMDVKTA LN L SI++ Q L + K K + ++ LK+ASRSWNI+F+ AIKSY FEQNVDEP VY+KVVNSI
Subjt: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLHLKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNSI
Query: VAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKDA
V FL LYVDDILLIGNDVGYLTDIKKWLA QF+MKD+
Subjt: VAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKDA
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| TYK09500.1 gag/pol protein [Cucumis melo var. makuwa] | 6.2e-43 | 68.61 | Show/hide |
Query: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
MLKSIRILLSIA FYDY+IWQ+DVKTA LN L G +K+ + ++ F+ ++ LK+ASRSWNI+F+ AIKSYGFEQNVD+P VY+KVVNS
Subjt: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
Query: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
IVAFLVLYVDDILL+GNDVGYLTDIKKWLA QF+MKD
Subjt: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
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| TYK24002.1 gag/pol protein [Cucumis melo var. makuwa] | 5.8e-41 | 66.9 | Show/hide |
Query: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
MLKSIRILLSIA FYDY+IWQMDVKTA LN L +G +K + ++ + ++ LK+ASRSWNIKF+ IK+YGFEQNV+EP VY+KVVNS
Subjt: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
Query: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMK---DAQ
IVAFLVLYVDDILLIGNDVGYLTDI+KWLA QF+MK DAQ
Subjt: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMK---DAQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7V4T1 Gag/pol protein | 2.8e-41 | 66.9 | Show/hide |
Query: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
MLKSIRILLSIA FYDY+IWQMDVKTA LN L +G +K + ++ + ++ LK+ASRSWNIKF+ IK+YGFEQNV+EP VY+KVVNS
Subjt: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
Query: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMK---DAQ
IVAFLVLYVDDILLIGNDVGYLTDI+KWLA QF+MK DAQ
Subjt: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMK---DAQ
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| A0A5A7VIS5 Gag/pol protein | 2.4e-40 | 70.8 | Show/hide |
Query: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLHLKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNSI
MLKSIRILLSIA FYDY+IWQMDVKTA LN L SI++ Q L + K K + ++ LK+ASRSWNI+F+ AIKSY FEQNVDEP VY+KVVNSI
Subjt: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLHLKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNSI
Query: VAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKDA
V FL LYVDDILLIGNDVGYLTDIKKWLA QF+MKD+
Subjt: VAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKDA
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| A0A5D3CDT9 Gag/pol protein | 3.0e-43 | 68.61 | Show/hide |
Query: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
MLKSIRILLSIA FYDY+IWQ+DVKTA LN L G +K+ + ++ F+ ++ LK+ASRSWNI+F+ AIKSYGFEQNVD+P VY+KVVNS
Subjt: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
Query: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
IVAFLVLYVDDILL+GNDVGYLTDIKKWLA QF+MKD
Subjt: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
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| A0A5D3DKH2 Gag/pol protein | 2.8e-41 | 66.9 | Show/hide |
Query: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
MLKSIRILLSIA FYDY+IWQMDVKTA LN L +G +K + ++ + ++ LK+ASRSWNIKF+ IK+YGFEQNV+EP VY+KVVNS
Subjt: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
Query: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMK---DAQ
IVAFLVLYVDDILLIGNDVGYLTDI+KWLA QF+MK DAQ
Subjt: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMK---DAQ
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| E2GK51 Gag/pol protein (Fragment) | 3.1e-40 | 64.23 | Show/hide |
Query: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
MLKSIRILLSIA FY+Y+IWQMDVKTA LN L + G + + + ++ + ++ LK+ASRSWNI+F+ AIKSYGFEQNVDEP VY+K+VNS
Subjt: MLKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNS
Query: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
+VAFL+LYVDDILLIGNDV YLTD+KKWL QF+MKD
Subjt: IVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.7e-07 | 28.99 | Show/hide |
Query: LKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGF-EQNVDE-PYVYEKVVN
+ S R +LS+ Y+ ++ QMDVKTA LN L+ +G+ + ++ LK+A+R W F A+K F +VD Y+ +K
Subjt: LKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGF-EQNVDE-PYVYEKVVN
Query: SIVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
+ +++LYVDD+++ D+ + + K++L +F M D
Subjt: SIVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.6e-12 | 35.51 | Show/hide |
Query: LKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNP--LHLKKASRSWNIKFNIAIKSYGFEQNVDEPYVY-EKVVN
+ SIR +LS+AA D ++ Q+DVKTA L+ L I++ Q + K V N LK+A R W +KF+ +KS + + +P VY ++
Subjt: LKSIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNP--LHLKKASRSWNIKFNIAIKSYGFEQNVDEPYVY-EKVVN
Query: SIVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
+ L+LYVDD+L++G D G + +K L+ F+MKD
Subjt: SIVAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-07 | 28.36 | Show/hide |
Query: SIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNSIVA
SIRI+L +A + I Q+DV A L L G + + + R L+ LK+A R+W ++ + + GF +V + ++ +
Subjt: SIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNSIVA
Query: FLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
++++YVDDIL+ GND L + L+ +F +KD
Subjt: FLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 9.7e-07 | 26.12 | Show/hide |
Query: SIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNSIVA
SIRI+L +A + I Q+DV A L L G + + + R ++ LK+A R+W ++ + + GF ++ + ++ +
Subjt: SIRILLSIAAFYDYQIWQMDVKTAILNEILRRVSIWLNQRGLLKRVKNKEFVSFRNPLH-LKKASRSWNIKFNIAIKSYGFEQNVDEPYVYEKVVNSIVA
Query: FLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
++++YVDDIL+ GND L L+ +F +K+
Subjt: FLVLYVDDILLIGNDVGYLTDIKKWLAMQFEMKD
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