CuGenDBv2

Gene ID	Cmc08g0222471
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr08:11304000..11304673
RNA-Seq Expression	Cmc08g0222471
Synteny	Cmc08g0222471
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0016020 - membrane (cellular component) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035602.1 pol protein [Cucumis melo var. makuwa]

3.2e-101

96.91

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV
        TRPSTVSELTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLM QGKVVAYASRQLKSHEQNYPT DLELAAV
Subjt:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV

KAA0042464.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]

6.4e-102

97.42

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV
        TRPSTVSELTRKGAPFVWSKACEDSFQ LKQKLVTAPVL+VPDGSG+FVIYSDASKKGLGCVLM QGKVVAYASRQLKSHEQNYPTHDLELAAV
Subjt:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV

KAA0046059.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]

3.5e-100

95.88

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSF+GHVVSKAGVSVDPAKIEAVT W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV
         RPSTVSELTRKGAPFVWSKACEDSFQ LKQKLVTA +LTVPDGSG+FVIYSDASKKGLGCVLM QGKVVAYASRQLKSHEQNYPTHDLELAAV
Subjt:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV

KAA0047209.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]

5.5e-101

96.39

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT+AEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE VTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV
        TRPSTVSELTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLM QGKVVAYASRQLKSHEQNYPTHDLELAAV
Subjt:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV

TYK11938.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]

3.5e-100

95.88

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSF+GHVVSKAGVSVDPAKIEAVT W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV
         RPSTVSELTRKGAPFVWSKACEDSFQ LKQKLVTA +LTVPDGSG+FVIYSDASKKGLGCVLM QGKVVAYASRQLKSHEQNYPTHDLELAAV
Subjt:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SWF6 Reverse transcriptase

1.5e-101

96.91

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV
        TRPSTVSELTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLM QGKVVAYASRQLKSHEQNYPT DLELAAV
Subjt:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV

A0A5A7TGC8 Ty3-gypsy retrotransposon protein

3.1e-102

97.42

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV
        TRPSTVSELTRKGAPFVWSKACEDSFQ LKQKLVTAPVL+VPDGSG+FVIYSDASKKGLGCVLM QGKVVAYASRQLKSHEQNYPTHDLELAAV
Subjt:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV

A0A5A7TXT7 Ty3-gypsy retrotransposon protein

1.7e-100

95.88

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSF+GHVVSKAGVSVDPAKIEAVT W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV
         RPSTVSELTRKGAPFVWSKACEDSFQ LKQKLVTA +LTVPDGSG+FVIYSDASKKGLGCVLM QGKVVAYASRQLKSHEQNYPTHDLELAAV
Subjt:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV

A0A5A7U149 Reverse transcriptase

2.6e-101

96.39

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT+AEHE+HLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE VTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV
        TRPSTVSELTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLM QGKVVAYASRQLKSHEQNYPTHDLELAAV
Subjt:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV

A0A5D3CLB5 Ty3-gypsy retrotransposon protein

1.7e-100

95.88

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSF+GHVVSKAGVSVDPAKIEAVT W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV
         RPSTVSELTRKGAPFVWSKACEDSFQ LKQKLVTA +LTVPDGSG+FVIYSDASKKGLGCVLM QGKVVAYASRQLKSHEQNYPTHDLELAAV
Subjt:  TRPSTVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV

SwissProt top hits

e value

%identity

Alignment

P04323 Retrovirus-related Pol polyprotein from transposon 17.6

2.7e-26

32.88

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M FGL NAPA F   MN + R  L+   +V++DDI+++S +  EH + L +V + L    L  +  KCEF  ++ +FLGHV++  G+  +P KIEA+  +
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSELT---------RKGAP-------------------FVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAY
          P+   E+          RK  P                      +   + +F+ LK  +   P+L VPD +  F + +DAS   LG VL   G  ++Y
Subjt:  TRPSTVSELT---------RKGAP-------------------FVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAY

Query:  ASRQLKSHEQNYPTHDLELAAV
         SR L  HE NY T + EL A+
Subjt:  ASRQLKSHEQNYPTHDLELAAV

P0CT41 Transposon Tf2-12 polyprotein

1.2e-21

28.76

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPST---------------------------VSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGK-----
         +P                             ++ L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS   +G VL  +       
Subjt:  TRPST---------------------------VSELTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGK-----

Query:  VVAYASRQLKSHEQNYPTHDLELAAV
         V Y S ++   + NY   D E+ A+
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAV

P10401 Retrovirus-related Pol polyprotein from transposon gypsy

2.8e-23

29.18

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        + FGL NA ++F   ++ V RE +     V++DD++I+S+ E++H  H+  VL+ L D  +     K  F+ + V +LG +VSK G   DP K++A+  +
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRP--------------------------------------STVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPV-LTVPDGSGNFVIYSDASKKGLGC
          P                                       +VS+   K  P  +++   ++FQ L+  L +  V L  PD    F + +DAS  G+G 
Subjt:  TRP--------------------------------------STVSELTRKGAPFVWSKACEDSFQTLKQKLVTAPV-LTVPDGSGNFVIYSDASKKGLGC

Query:  VLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV
        VL  +G+ +   SR LK  EQNY T++ EL A+
Subjt:  VLMHQGKVVAYASRQLKSHEQNYPTHDLELAAV

P20825 Retrovirus-related Pol polyprotein from transposon 297

1.9e-27

32.43

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M FGL NAPA F   MN + R  L+   +V++DDI+I+S +  EH   +++V   L D  L  +  KCEF  K+ +FLGH+V+  G+  +P K++A+  +
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSELT---------RKGAP-----------------FVWSKACE--DSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAY
          P+   E+          RK  P                  + ++  E  ++F+ LK  ++  P+L +PD    FV+ +DAS   LG VL   G  +++
Subjt:  TRPSTVSELT---------RKGAP-----------------FVWSKACE--DSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAY

Query:  ASRQLKSHEQNYPTHDLELAAV
         SR L  HE NY   + EL A+
Subjt:  ASRQLKSHEQNYPTHDLELAAV

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein

9.0e-22

31.11

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M FGL NAP+ F   M   FR+    FV V++DDILI+S++  EH +HL  VL+ L++  L  K  KC+F  ++  FLG+ +    ++    K  A+  +
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTV--------------------SELTRKGAPFV-----WSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGK------V
          P TV                    S++ +    F+     W++  + + + LK  L  +PVL   +   N+ + +DASK G+G VL           V
Subjt:  TRPSTV--------------------SELTRKGAPFV-----WSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGK------V

Query:  VAYASRQLKSHEQNYPTHDLELAAV
        V Y S+ L+S ++NYP  +LEL  +
Subjt:  VAYASRQLKSHEQNYPTHDLELAAV

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.9e-12

33.06

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Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEL--------------------------TRKGAPFVWS
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +EL                            K     W+
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEL--------------------------TRKGAPFVWS

Query:  KACEDSFQTLKQKLVTAPVLTVPD
        +    +F+ LK  + T PVL +PD
Subjt:  KACEDSFQTLKQKLVTAPVLTVPD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTCGTGATTGTGTTTATCGACGATATCTTGAT
ATACTCTAAGACGGAGGCCGAACACGAGGAGCACTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTACGCAAAGTTCTCGAAGTGCGAGTTTTGGCTGAAGC
AGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTAGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGTTGACC
AGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTTCAGACCCTTAAACAGAAGTTAGTTACCGCACCGGTTCTTACGGTACCTGATGGTTCTGGCAA
TTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCATCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACT
ACCCTACACATGATCTAGAGTTGGCAGCAGTGTTTTTGCTTTGA

mRNA sequence

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Protein sequence

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MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSELT
RKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAVFLL

Cmc08g0222471 (gene) of Melon (Charmono) v1.1 genome