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Cmc08g0222531 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0222531
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionDEAD-box ATP-dependent RNA helicase 32
Genome locationCMiso1.1chr08:11448029..11449042
RNA-Seq ExpressionCmc08g0222531
SyntenyCmc08g0222531
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025457.1 hypothetical protein E6C27_scaffold417G00550 [Cucumis melo var. makuwa]5.0e-1077.27Show/hide
Query:  REYLVWLKSPGEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF
        R  +V +   GEGKDRGKLASD+EG VTCHMGTQFCFRVYVSVF
Subjt:  REYLVWLKSPGEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF

KAA0033961.1 DEAD-box ATP-dependent RNA helicase 32 [Cucumis melo var. makuwa]9.7e-1452Show/hide
Query:  MIRIKLIGEFLLSTREYLVWLKSP------------------------------------------GEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF
        MIRIKLIGEFLLSTREYLVWLKSP                                          GEGK RGK+A  +EGFVTCHM TQFCFRVYVSVF
Subjt:  MIRIKLIGEFLLSTREYLVWLKSP------------------------------------------GEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF

KAA0045385.1 hypothetical protein E6C27_scaffold442G00010 [Cucumis melo var. makuwa]1.3e-1065.45Show/hide
Query:  IKLIGEFLLSTREYLVWLKSPGEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF
        I +I       R  +V +  PGEGK RGKLASDKEG VTCHMGTQFCFRVYV+VF
Subjt:  IKLIGEFLLSTREYLVWLKSPGEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF

KAA0051087.1 transposase [Cucumis melo var. makuwa]4.5e-1144.95Show/hide
Query:  IKLIGEFLLSTREYLVWLKS-------------------------------------------------PG-----EGKDRGKLASDKEGFVTCHMGTQF
        IKLIGEFLLS REY VWLKS                                                 PG     EGK RGKLASDKEG VTCHMGTQF
Subjt:  IKLIGEFLLSTREYLVWLKS-------------------------------------------------PG-----EGKDRGKLASDKEGFVTCHMGTQF

Query:  CFRVYVSVF
        C+R YVSVF
Subjt:  CFRVYVSVF

KAA0065872.1 hypothetical protein E6C27_scaffold538G00420 [Cucumis melo var. makuwa]2.2e-1080.49Show/hide
Query:  LVWLKSPGEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF
        +V +  PGEGK RGKLASD+EGFV CHMGTQFCFRVYVSVF
Subjt:  LVWLKSPGEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF

TrEMBL top hitse value%identityAlignment
A0A5A7SWX3 DEAD-box ATP-dependent RNA helicase 324.7e-1452Show/hide
Query:  MIRIKLIGEFLLSTREYLVWLKSP------------------------------------------GEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF
        MIRIKLIGEFLLSTREYLVWLKSP                                          GEGK RGK+A  +EGFVTCHM TQFCFRVYVSVF
Subjt:  MIRIKLIGEFLLSTREYLVWLKSP------------------------------------------GEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF

A0A5A7TVG7 Uncharacterized protein6.3e-1165.45Show/hide
Query:  IKLIGEFLLSTREYLVWLKSPGEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF
        I +I       R  +V +  PGEGK RGKLASDKEG VTCHMGTQFCFRVYV+VF
Subjt:  IKLIGEFLLSTREYLVWLKSPGEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF

A0A5A7VC30 Uncharacterized protein1.1e-1080.49Show/hide
Query:  LVWLKSPGEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF
        +V +  PGEGK RGKLASD+EGFV CHMGTQFCFRVYVSVF
Subjt:  LVWLKSPGEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF

A0A5D3C0E4 Uncharacterized protein2.4e-1077.27Show/hide
Query:  REYLVWLKSPGEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF
        R  +V +   GEGKDRGKLASD+EG VTCHMGTQFCFRVYVSVF
Subjt:  REYLVWLKSPGEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF

A0A5D3CKP0 Transposase2.2e-1144.95Show/hide
Query:  IKLIGEFLLSTREYLVWLKS-------------------------------------------------PG-----EGKDRGKLASDKEGFVTCHMGTQF
        IKLIGEFLLS REY VWLKS                                                 PG     EGK RGKLASDKEG VTCHMGTQF
Subjt:  IKLIGEFLLSTREYLVWLKS-------------------------------------------------PG-----EGKDRGKLASDKEGFVTCHMGTQF

Query:  CFRVYVSVF
        C+R YVSVF
Subjt:  CFRVYVSVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGGATCAAGTTAATTGGAGAATTTTTACTGTCAACTAGGGAGTACCTTGTTTGGCTAAAATCTCCAGGCGAAGGTAAAGATAGAGGAAAGCTGGCGAGC
GACAAAGAAGGATTCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTAGGATCAAGTTAATTGGAGAATTTTTACTGTCAACTAGGGAGTACCTTGTTTGGCTAAAATCTCCAGGCGAAGGTAAAGATAGAGGAAAGCTGGCGAGC
GACAAAGAAGGATTCGTGACATGCCATATGGGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTCCGTTTTTAATGAAAATTTATTCTTCCCT
CGTTTCAAAAAGTGTCTCTTGTCATTGTTTCCCTTTTAGTAACGACCTCAGCTTAGTATAAAGAGTTGGGTCGTTACATTATCGATTAAAACCTTCGTGTTTTCG
TTTAGGTGGATCCGTTGAGCGTGGACTCGAT
Protein sequenceShow/hide protein sequence
MIRIKLIGEFLLSTREYLVWLKSPGEGKDRGKLASDKEGFVTCHMGTQFCFRVYVSVF