; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0222601 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0222601
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionSWIM-type domain-containing protein
Genome locationCMiso1.1chr08:11617170..11618007
RNA-Seq ExpressionCmc08g0222601
SyntenyCmc08g0222601
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062637.1 uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa]1.5e-12192.77Show/hide
Query:  PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPV
        PSIRGYL+KVGFERWS AYSRKRRYQIMTTNICESL SKLKIDRDLPVASLLEAIREFLQRWFYERRK ASCLKSVLSSWAEGLIRKLVDESRSFIVNPV
Subjt:  PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPV

Query:  SEVEFQVVDGGKNFLVKLNCNSCNCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRP
        SEVEFQVVDGGKNFLVKLNCNSC+CLFWDLEEI CAHALIVIRSLNLNPYAFVSQYYYATVL  TYGGLVR IGNHTDWSVVEV +NILP +FRRP GRP
Subjt:  SEVEFQVVDGGKNFLVKLNCNSCNCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRP

Query:  RKRRIPSIDEVSKSLKCSRCKRAGHNIRTCRFEPI
        RKRRIPSI EVSKS KCSRCKRAGHNIRTC FEPI
Subjt:  RKRRIPSIDEVSKSLKCSRCKRAGHNIRTCRFEPI

TYJ96591.1 uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]5.6e-12494.89Show/hide
Query:  PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPV
        PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESL SKLKIDRDLPVASLLEAIREFLQRWFYERRK ASCLKSVLSSWAEGLIRKLVDESRSFIVNPV
Subjt:  PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPV

Query:  SEVEFQVVDGGKNFLVKLNCNSCNCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRP
        SEVEFQVVDGGKNFLVKLNCNSC+CLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLS TYGGLVR IGNHTDWSVV V +NILP VFRRPAGRP
Subjt:  SEVEFQVVDGGKNFLVKLNCNSCNCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRP

Query:  RKRRIPSIDEVSKSLKCSRCKRAGHNIRTCRFEPI
        RKRRIPSI EVSKS KCSRCKRA HNIRTCRFEPI
Subjt:  RKRRIPSIDEVSKSLKCSRCKRAGHNIRTCRFEPI

TYK03234.1 uncharacterized protein E5676_scaffold298G00470 [Cucumis melo var. makuwa]3.3e-10894.71Show/hide
Query:  MTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCNCLF
        MTTNICESL SKLKIDRDLPVASLLEAIREFLQRWFYERRK ASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSC+CLF
Subjt:  MTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCNCLF

Query:  WDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRPRKRRIPSIDEVSKSLKCSRCKRAGHNI
        WDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLS TYGGLVR IGNHTDWSVVEV +NILP VFRRPAGRPRKRRIPSI EVSKS KCSRCKR GHNI
Subjt:  WDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRPRKRRIPSIDEVSKSLKCSRCKRAGHNI

Query:  RTCRFEPI
        RTCRFEPI
Subjt:  RTCRFEPI

TYK15459.1 uncharacterized protein E5676_scaffold477G00290 [Cucumis melo var. makuwa]1.3e-115100Show/hide
Query:  MTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCNCLF
        MTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCNCLF
Subjt:  MTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCNCLF

Query:  WDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRPRKRRIPSIDEVSKSLKCSRCKRAGHNI
        WDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRPRKRRIPSIDEVSKSLKCSRCKRAGHNI
Subjt:  WDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRPRKRRIPSIDEVSKSLKCSRCKRAGHNI

Query:  RTCRFEPI
        RTCRFEPI
Subjt:  RTCRFEPI

XP_016900337.1 PREDICTED: uncharacterized protein LOC107990862 [Cucumis melo]5.8e-12193.19Show/hide
Query:  PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPV
        PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESL SKLKIDRDLPVASLLEAIREFLQRWFYERRK ASCLKSVLSSW+EGLIRKLVDESRSFIVNPV
Subjt:  PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPV

Query:  SEVEFQVVDGGKNFLVKLNCNSCNCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRP
        SEVEFQVVDGGKNFLVKLNCNSC+CLFWDLEEIP AHALIVI SLNLNPYAFVSQYYYATVLS TYGGLVR IGNHTDWSVVE+ +NILP VFRRPA RP
Subjt:  SEVEFQVVDGGKNFLVKLNCNSCNCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRP

Query:  RKRRIPSIDEVSKSLKCSRCKRAGHNIRTCRFEPI
        RKRRIPSI EVSKS KCSRCKRAGHNIRTC FEPI
Subjt:  RKRRIPSIDEVSKSLKCSRCKRAGHNIRTCRFEPI

TrEMBL top hitse value%identityAlignment
A0A1S4DWH2 uncharacterized protein LOC1079908622.8e-12193.19Show/hide
Query:  PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPV
        PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESL SKLKIDRDLPVASLLEAIREFLQRWFYERRK ASCLKSVLSSW+EGLIRKLVDESRSFIVNPV
Subjt:  PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPV

Query:  SEVEFQVVDGGKNFLVKLNCNSCNCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRP
        SEVEFQVVDGGKNFLVKLNCNSC+CLFWDLEEIP AHALIVI SLNLNPYAFVSQYYYATVLS TYGGLVR IGNHTDWSVVE+ +NILP VFRRPA RP
Subjt:  SEVEFQVVDGGKNFLVKLNCNSCNCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRP

Query:  RKRRIPSIDEVSKSLKCSRCKRAGHNIRTCRFEPI
        RKRRIPSI EVSKS KCSRCKRAGHNIRTC FEPI
Subjt:  RKRRIPSIDEVSKSLKCSRCKRAGHNIRTCRFEPI

A0A5A7V6N4 SWIM-type domain-containing protein7.4e-12292.77Show/hide
Query:  PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPV
        PSIRGYL+KVGFERWS AYSRKRRYQIMTTNICESL SKLKIDRDLPVASLLEAIREFLQRWFYERRK ASCLKSVLSSWAEGLIRKLVDESRSFIVNPV
Subjt:  PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPV

Query:  SEVEFQVVDGGKNFLVKLNCNSCNCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRP
        SEVEFQVVDGGKNFLVKLNCNSC+CLFWDLEEI CAHALIVIRSLNLNPYAFVSQYYYATVL  TYGGLVR IGNHTDWSVVEV +NILP +FRRP GRP
Subjt:  SEVEFQVVDGGKNFLVKLNCNSCNCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRP

Query:  RKRRIPSIDEVSKSLKCSRCKRAGHNIRTCRFEPI
        RKRRIPSI EVSKS KCSRCKRAGHNIRTC FEPI
Subjt:  RKRRIPSIDEVSKSLKCSRCKRAGHNIRTCRFEPI

A0A5D3BD68 SWIM-type domain-containing protein2.7e-12494.89Show/hide
Query:  PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPV
        PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESL SKLKIDRDLPVASLLEAIREFLQRWFYERRK ASCLKSVLSSWAEGLIRKLVDESRSFIVNPV
Subjt:  PSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPV

Query:  SEVEFQVVDGGKNFLVKLNCNSCNCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRP
        SEVEFQVVDGGKNFLVKLNCNSC+CLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLS TYGGLVR IGNHTDWSVV V +NILP VFRRPAGRP
Subjt:  SEVEFQVVDGGKNFLVKLNCNSCNCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRP

Query:  RKRRIPSIDEVSKSLKCSRCKRAGHNIRTCRFEPI
        RKRRIPSI EVSKS KCSRCKRA HNIRTCRFEPI
Subjt:  RKRRIPSIDEVSKSLKCSRCKRAGHNIRTCRFEPI

A0A5D3BVP4 SWIM-type domain-containing protein1.6e-10894.71Show/hide
Query:  MTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCNCLF
        MTTNICESL SKLKIDRDLPVASLLEAIREFLQRWFYERRK ASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSC+CLF
Subjt:  MTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCNCLF

Query:  WDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRPRKRRIPSIDEVSKSLKCSRCKRAGHNI
        WDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLS TYGGLVR IGNHTDWSVVEV +NILP VFRRPAGRPRKRRIPSI EVSKS KCSRCKR GHNI
Subjt:  WDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRPRKRRIPSIDEVSKSLKCSRCKRAGHNI

Query:  RTCRFEPI
        RTCRFEPI
Subjt:  RTCRFEPI

A0A5D3CZ48 SWIM-type domain-containing protein6.1e-116100Show/hide
Query:  MTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCNCLF
        MTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCNCLF
Subjt:  MTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCNCLF

Query:  WDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRPRKRRIPSIDEVSKSLKCSRCKRAGHNI
        WDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRPRKRRIPSIDEVSKSLKCSRCKRAGHNI
Subjt:  WDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRPRKRRIPSIDEVSKSLKCSRCKRAGHNI

Query:  RTCRFEPI
        RTCRFEPI
Subjt:  RTCRFEPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAGCCGATATACCATCTATTAGAGGATATCTTATGAAAGTTGGTTTTGAGAGATGGTCACGCGCATACTCTAGAAAAAGAAGATATCAAATAATGACAACGAA
TATTTGTGAAAGCTTGAAATCTAAGTTGAAGATTGATAGAGACTTACCGGTTGCATCCTTGCTTGAGGCTATTAGAGAGTTTCTTCAACGGTGGTTTTATGAGAGAAGAA
AAACAGCCTCATGTTTAAAGAGTGTTTTGAGTTCTTGGGCTGAAGGACTAATAAGAAAGCTAGTTGATGAATCAAGAAGCTTCATCGTGAATCCTGTGAGTGAAGTTGAA
TTTCAAGTAGTTGATGGAGGCAAGAATTTTTTAGTAAAGTTGAATTGTAATAGCTGCAATTGCCTTTTTTGGGATCTAGAAGAAATTCCATGTGCTCATGCTCTTATTGT
CATTCGTAGTCTTAATTTGAATCCTTATGCATTCGTTTCACAGTATTACTATGCTACTGTATTGTCTGAAACTTATGGTGGTTTAGTTCGTCTGATTGGTAACCATACTG
ATTGGAGTGTTGTGGAGGTGAAAAACAATATATTGCCTCTAGTATTTAGACGTCCAGCAGGAAGGCCTCGAAAAAGAAGGATTCCTTCTATTGATGAAGTTTCAAAGAGC
TTAAAATGTAGTCGCTGTAAGAGAGCCGGTCATAATATTAGAACTTGTAGATTTGAACCTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAGCCGATATACCATCTATTAGAGGATATCTTATGAAAGTTGGTTTTGAGAGATGGTCACGCGCATACTCTAGAAAAAGAAGATATCAAATAATGACAACGAA
TATTTGTGAAAGCTTGAAATCTAAGTTGAAGATTGATAGAGACTTACCGGTTGCATCCTTGCTTGAGGCTATTAGAGAGTTTCTTCAACGGTGGTTTTATGAGAGAAGAA
AAACAGCCTCATGTTTAAAGAGTGTTTTGAGTTCTTGGGCTGAAGGACTAATAAGAAAGCTAGTTGATGAATCAAGAAGCTTCATCGTGAATCCTGTGAGTGAAGTTGAA
TTTCAAGTAGTTGATGGAGGCAAGAATTTTTTAGTAAAGTTGAATTGTAATAGCTGCAATTGCCTTTTTTGGGATCTAGAAGAAATTCCATGTGCTCATGCTCTTATTGT
CATTCGTAGTCTTAATTTGAATCCTTATGCATTCGTTTCACAGTATTACTATGCTACTGTATTGTCTGAAACTTATGGTGGTTTAGTTCGTCTGATTGGTAACCATACTG
ATTGGAGTGTTGTGGAGGTGAAAAACAATATATTGCCTCTAGTATTTAGACGTCCAGCAGGAAGGCCTCGAAAAAGAAGGATTCCTTCTATTGATGAAGTTTCAAAGAGC
TTAAAATGTAGTCGCTGTAAGAGAGCCGGTCATAATATTAGAACTTGTAGATTTGAACCTATTTGA
Protein sequenceShow/hide protein sequence
MDGADIPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLKSKLKIDRDLPVASLLEAIREFLQRWFYERRKTASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVE
FQVVDGGKNFLVKLNCNSCNCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSETYGGLVRLIGNHTDWSVVEVKNNILPLVFRRPAGRPRKRRIPSIDEVSKS
LKCSRCKRAGHNIRTCRFEPI