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Cmc08g0222611 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0222611
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionSWIM-type domain-containing protein
Genome locationCMiso1.1chr08:11618250..11619125
RNA-Seq ExpressionCmc08g0222611
SyntenyCmc08g0222611
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062637.1 uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa]2.3e-9095.43Show/hide
Query:  MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS
        MIRKYVSD SCSMIVHSSHKQAS EFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGV +SYYKAWRAKESVMK LKGDADDSYALIPKFFSKLKEIN GS
Subjt:  MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS

Query:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSIVDSENDAS
        FTAYEIDPNGHFKYCFMAIASSIEGW YCRPNIAVDGTFLKCKYGGTLLTA TMDGNSKIFPLAFSIVDSENDAS
Subjt:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSIVDSENDAS
TYJ96591.1 uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]1.6e-8393.79Show/hide
Query:  MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS
        MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGV +SYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEIN GS
Subjt:  MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS

Query:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIF
        FTAYEIDPNGHFKYCFMAIASSIEGW YCRPNIAVDGTFLKCKYGGTLLTAATMD + +++
Subjt:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIF
TYK19772.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]8.1e-6496.8Show/hide
Query:  MRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGSFTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLT
        MRMNYGV +SYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEIN GSFTAYEIDPNGHFKYCFMAIASSIEGW YCRPNIAVDGTFLKCKYGGTLLT
Subjt:  MRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGSFTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLT

Query:  AATMDGNSKIFPLAFSIVDSENDAS
        AATMDGNSKIFPLAFSIVDSENDAS
Subjt:  AATMDGNSKIFPLAFSIVDSENDAS
TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]8.4e-6168Show/hide
Query:  IRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS
        +RKY+++H+CS+ ++ ++HKQASS  +S C I     S+  STP DI+ HMR   GV +SYYKAWRAKE VM  L G+A +SYALIP FF KLKEIN GS
Subjt:  IRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS

Query:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSIVDSENDAS
        FTAYE D  GHFKYCFMAI + IEGW YCRPNI+VDGTFLK KYGGTLLTA+T+DGN++IFPLAFSIVDSENDAS
Subjt:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSIVDSENDAS
XP_031743969.1 uncharacterized protein LOC116404743 isoform X1 [Cucumis sativus]8.6e-6689.36Show/hide
Query:  MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS
        MIRK VSDHSCSMIVHSSHKQASSEF S CMIDYLRYSYSHS PKDIIHHM MNYGV +SYYK  RAKESV KLLKGD D+SYALIPKFFSKLKEIN GS
Subjt:  MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS

Query:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLK
        FTAYEID NGHFKYCFMAIASSIEGW YCRPNIAVDGTFLK
Subjt:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLK
TrEMBL top hitse value%identityAlignment
A0A5A7V6N4 SWIM-type domain-containing protein1.1e-9095.43Show/hide
Query:  MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS
        MIRKYVSD SCSMIVHSSHKQAS EFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGV +SYYKAWRAKESVMK LKGDADDSYALIPKFFSKLKEIN GS
Subjt:  MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS

Query:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSIVDSENDAS
        FTAYEIDPNGHFKYCFMAIASSIEGW YCRPNIAVDGTFLKCKYGGTLLTA TMDGNSKIFPLAFSIVDSENDAS
Subjt:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSIVDSENDAS
A0A5A7VG38 Protein FAR1-RELATED SEQUENCE 4-like4.0e-6168Show/hide
Query:  IRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS
        +RKY+++H+CS+ ++ ++HKQASS  +S C I     S+  STP DI+ HMR   GV +SYYKAWRAKE VM  L G+A +SYALIP FF KLKEIN GS
Subjt:  IRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS

Query:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSIVDSENDAS
        FTAYE D  GHFKYCFMAI + IEGW YCRPNI+VDGTFLK KYGGTLLTA+T+DGN++IFPLAFSIVDSENDAS
Subjt:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSIVDSENDAS
A0A5D3BD68 SWIM-type domain-containing protein7.6e-8493.79Show/hide
Query:  MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS
        MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGV +SYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEIN GS
Subjt:  MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS

Query:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIF
        FTAYEIDPNGHFKYCFMAIASSIEGW YCRPNIAVDGTFLKCKYGGTLLTAATMD + +++
Subjt:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIF
A0A5D3D8A3 Protein FAR1-RELATED SEQUENCE 3-like3.9e-6496.8Show/hide
Query:  MRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGSFTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLT
        MRMNYGV +SYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEIN GSFTAYEIDPNGHFKYCFMAIASSIEGW YCRPNIAVDGTFLKCKYGGTLLT
Subjt:  MRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGSFTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLT

Query:  AATMDGNSKIFPLAFSIVDSENDAS
        AATMDGNSKIFPLAFSIVDSENDAS
Subjt:  AATMDGNSKIFPLAFSIVDSENDAS
A0A5D3DJR8 MuDR family transposase4.0e-6168Show/hide
Query:  IRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS
        +RKY+++H+CS+ ++ ++HKQASS  +S C I     S+  STP DI+ HMR   GV +SYYKAWRAKE VM  L G+A +SYALIP FF KLKEIN GS
Subjt:  IRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGS

Query:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSIVDSENDAS
        FTAYE D  GHFKYCFMAI + IEGW YCRPNI+VDGTFLK KYGGTLLTA+T+DGN++IFPLAFSIVDSENDAS
Subjt:  FTAYEIDPNGHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSIVDSENDAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64255.1 MuDR family transposase1.8e-1333.53Show/hide
Query:  IRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGSF
        I KY   H+C  IV    K   SEF +  +   +RY  +  T  ++    +   G  +       AKE  +K + GD D S+   PK  S L   N    
Subjt:  IRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGSF

Query:  T-AYEIDPNGHF-KYC--FMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSI
           Y++ PN +F  +C  F A   SIEG+ +CRP I VD   L C+Y   L+ A+ +D  +K FPLAF++
Subjt:  T-AYEIDPNGHF-KYC--FMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSI
AT1G64260.1 MuDR family transposase1.3e-1130.59Show/hide
Query:  IRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGSF
        I KY   H+CS   H       SEF +  +   +R   + S   ++    +   G  +   K    K  V+K + GD D S+ ++PK  S     N    
Subjt:  IRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGSF

Query:  T-AYEIDPN---GHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSI
           Y++ PN     F+  F + + SIEG+ +CRP I VD   L  KY   L+ A+ +D  +K FPLAF++
Subjt:  T-AYEIDPN---GHFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCGAAAATACGTTAGTGATCATAGTTGCTCAATGATTGTTCATTCTTCTCATAAGCAAGCATCTTCAGAATTTGTTAGTCATTGTATGATTGATTATTTGAGGTA
TAGTTATTCTCATTCAACACCAAAAGATATCATCCATCATATGCGTATGAATTATGGAGTTTTTATTAGTTATTATAAGGCTTGGAGAGCAAAAGAATCTGTTATGAAGT
TGTTGAAAGGAGATGCCGATGATTCTTATGCTTTGATTCCAAAGTTCTTCTCAAAGCTAAAAGAAATAAATTCAGGTTCATTTACTGCATACGAAATAGATCCAAATGGC
CATTTCAAATATTGTTTTATGGCTATTGCATCATCAATTGAAGGTTGGATATATTGTAGACCAAATATAGCCGTTGATGGGACATTTTTAAAGTGTAAGTATGGTGGAAC
ATTGTTAACTGCAGCAACTATGGATGGTAATAGTAAAATTTTCCCTCTTGCATTTAGTATAGTAGATTCGGAGAATGATGCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCGAAAATACGTTAGTGATCATAGTTGCTCAATGATTGTTCATTCTTCTCATAAGCAAGCATCTTCAGAATTTGTTAGTCATTGTATGATTGATTATTTGAGGTA
TAGTTATTCTCATTCAACACCAAAAGATATCATCCATCATATGCGTATGAATTATGGAGTTTTTATTAGTTATTATAAGGCTTGGAGAGCAAAAGAATCTGTTATGAAGT
TGTTGAAAGGAGATGCCGATGATTCTTATGCTTTGATTCCAAAGTTCTTCTCAAAGCTAAAAGAAATAAATTCAGGTTCATTTACTGCATACGAAATAGATCCAAATGGC
CATTTCAAATATTGTTTTATGGCTATTGCATCATCAATTGAAGGTTGGATATATTGTAGACCAAATATAGCCGTTGATGGGACATTTTTAAAGTGTAAGTATGGTGGAAC
ATTGTTAACTGCAGCAACTATGGATGGTAATAGTAAAATTTTCCCTCTTGCATTTAGTATAGTAGATTCGGAGAATGATGCTTCTTGA
Protein sequenceShow/hide protein sequence
MIRKYVSDHSCSMIVHSSHKQASSEFVSHCMIDYLRYSYSHSTPKDIIHHMRMNYGVFISYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINSGSFTAYEIDPNG
HFKYCFMAIASSIEGWIYCRPNIAVDGTFLKCKYGGTLLTAATMDGNSKIFPLAFSIVDSENDAS