; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0222931 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0222931
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRibonuclease H
Genome locationCMiso1.1chr08:12067910..12069115
RNA-Seq ExpressionCmc08g0222931
SyntenyCmc08g0222931
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031738551.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]9.4e-20188.03Show/hide
Query:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE
        MESDKESDDE+   ISSELLR+VEEED+VLGPHQELVE INLGSQEESKEVKIGTS+TSE+RKK+INLLREYS IFAWSYQD+P L+TDIVVHRVPLK E
Subjt:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE

Query:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
        CN VRQKLRKMKPD+LIK+KEEVQKQIEAGFL VSKYP+WVANIV VPKKD K RMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
Subjt:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN

Query:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG
        QIKMAEEDREKTTFITLWGTFCYK MPFGLKN GATY RAMVTLFHDMMHK+IEVYVDDMIAKSKA+EDHT+ L+KLFDRLRKYQLKLNPSK TFGATSG
Subjt:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG

Query:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC
        KLLGFIVSEEGIKVDPDKV+A M+M S +TEKE+R  LGRLNYISRFISHLTPTC+PIFKLLRKNNPGKW+EDCEEAFNKIKQYLQSPPVLIPP  G+  
Subjt:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC

Query:  I
        I
Subjt:  I

XP_031738857.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402780 [Cucumis sativus]9.4e-20188.03Show/hide
Query:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE
        MESDKESDDE+   ISSELLR+VEEED+VLGPHQELVE INLGSQEESKEVKIGTS+TSE+RKK+INLLREYS IFAWSYQD+P L+TDIVVHRVPLK E
Subjt:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE

Query:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
        CN VRQKLRKMKPD+LIK+KEEVQKQIEAGFL VSKYP+WVANIV VPKKD K RMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
Subjt:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN

Query:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG
        QIKMAEEDREKTTFITLWGTFCYK MPFGLKN GATY RAMVTLFHDMMHK+IEVYVDDMIAKSKA+EDHT+ L+KLFDRLRKYQLKLNPSK TFGATSG
Subjt:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG

Query:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC
        KLLGFIVSEEGIKVDPDKV+A M+M S +TEKE+R  LGRLNYISRFISHLTPTC+PIFKLLRKNNPGKW+EDCEEAFNKIKQYLQSPPVLIPP  G+  
Subjt:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC

Query:  I
        I
Subjt:  I

XP_031739260.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402917 [Cucumis sativus]8.5e-20288.53Show/hide
Query:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE
        MESDKESDDE+   ISSELLR+VEEED+VLGPHQELVE INLGSQEESKEVKIGTS+TSE+RKK+INLLREYS IFAWSYQD+P L+TDIVVHRVPLK E
Subjt:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE

Query:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
        CN VRQKLRKMKPD+LIKIKEEVQKQIEAGFLTVSKYP+WVANIV VPKKD K RMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
Subjt:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN

Query:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG
        QIKMAEEDREKTTFITLWGTFCYK MPFGLKN GATY RAMVTLFHDMMHK+IEVYVDDMIAKSKA+EDHT+ L+KLFDRLRKYQLKLNPSK TFGATSG
Subjt:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG

Query:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC
        KLLGFIVSEEGIKVDPDKV+A M+M S +TEKE+R  LGRLNYISRFISHLTPTC+PIFKLLRKNNPGKW+EDCEEAFNKIKQYLQSPPVLIPP  G+  
Subjt:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC

Query:  I
        I
Subjt:  I

XP_031741309.1 LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus]9.4e-20188.03Show/hide
Query:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE
        MESDKESDDE+   ISSELLR+VEEED+VLGPHQELVE INLGSQEESKEVKIGTS+TSE+RKK+INLLREYS IFAWSYQD+P L+TDIVVHRVPLK E
Subjt:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE

Query:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
        CN VRQKLRKMKPD+LIK+KEEVQKQIEAGFL VSKYP+WVANIV VPKKD K RMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
Subjt:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN

Query:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG
        QIKMAEEDREKTTFITLWGTFCYK MPFGLKN GATY RAMVTLFHDMMHK+IEVYVDDMIAKSKA+EDHT+ L+KLFDRLRKYQLKLNPSK TFGATSG
Subjt:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG

Query:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC
        KLLGFIVSEEGIKVDPDKV+A M+M S +TEKE+R  LGRLNYISRFISHLTPTC+PIFKLLRKNNPGKW+EDCEEAFNKIKQYLQSPPVLIPP  G+  
Subjt:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC

Query:  I
        I
Subjt:  I

XP_031741698.1 uncharacterized protein LOC116403895 [Cucumis sativus]9.4e-20188.03Show/hide
Query:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE
        MESDKESDDE+   ISSELLR+VEEED+VLGPHQELVE INLGSQEESKEVKIGTS+TSE+RKK+INLLREYS IFAWSYQD+P L+TDIVVHRVPLK E
Subjt:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE

Query:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
        CN VRQKLRKMKPD+LIK+KEEVQKQIEAGFL VSKYP+WVANIV VPKKD K RMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
Subjt:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN

Query:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG
        QIKMAEEDREKTTFITLWGTFCYK MPFGLKN GATY RAMVTLFHDMMHK+IEVYVDDMIAKSKA+EDHT+ L+KLFDRLRKYQLKLNPSK TFGATSG
Subjt:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG

Query:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC
        KLLGFIVSEEGIKVDPDKV+A M+M S +TEKE+R  LGRLNYISRFISHLTPTC+PIFKLLRKNNPGKW+EDCEEAFNKIKQYLQSPPVLIPP  G+  
Subjt:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC

Query:  I
        I
Subjt:  I

TrEMBL top hitse value%identityAlignment
A0A5A7VK41 Reverse transcriptase domain-containing protein1.1e-18183.29Show/hide
Query:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE
        M+ DKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKE                               D+  LSTDIVVHRVPLK E
Subjt:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE

Query:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
        CN VRQKLRKMKPDVLIKIKEEVQKQIEAGFLTV KYP+WVANIV VPKKD K RMCVDYRDLNRASPKDN PLPHIDMLV+NTAGYSTFSFMDGFSGYN
Subjt:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN

Query:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG
        QIKMAEEDREK TFITLWGTF YK MPFGLKNVGATY RAMVTLFHDMMHK+IEVYVDDMIAKSKADEDHT TL+KLFDRLRKYQLK NPSK TFGATSG
Subjt:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG

Query:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC
        KLLGFIVSEEGIKVDPDKVRA MEM+S K EKEIRG LGRLNYISRFISHLTPTC+ IFKLL KNNPGKW+EDCEEAFNKIKQYLQSPPVLIPP LG+  
Subjt:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC

Query:  I
        I
Subjt:  I

A0A6J1CNY7 Ribonuclease H1.9e-16772.82Show/hide
Query:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE
        +ESDKE DDE     S+ELLRM+EEE+++LGPH+EL E +NLGSQ E+KE+KIGT ++SESRKKLI LL EY+ +FAWSYQD+P L TDIVVH++ +  +
Subjt:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE

Query:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
           VRQKLRKM+PD+LIKIK+EV+KQI+AGFLT+S YP+WVANIV VPKK+ + RMCVDYRDLNRASPKDNFPLPHID+LVDNTAG+STFSFMDGFSGYN
Subjt:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN

Query:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG
        QIKMA EDREKTTFITLWGTF YK M FGLKN GATY RAMVTLFHD+MHK+IEVYVDDMIAKSK  E HT+ L+KLFDRLRK++LKLNP+K  FGAT+G
Subjt:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG

Query:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC
        KLLGF+VS+EGIKV+ DKV+A +EM   +T+K++RG LGRLNYI+RFISHLT TC+PIFKLLRKNN G W E+C+ A +KIKQYL  PP+L+PPT G+  
Subjt:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC

Query:  I
        I
Subjt:  I

A0A6J1D099 Ribonuclease H1.6e-16973.82Show/hide
Query:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE
        +ESD+E DDE     S+ELLRM+EEE+++LGPH+EL E +NLGSQ E+KE+KIGT ++SESRKKLI LL EY+ +FAWSY D+  L TDIVVH++P+  E
Subjt:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE

Query:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
           +RQKLRKM+PD+LIKIK EV+KQI+AGFLTVS YP+WVANIV VPKK+ + RMCVDYRDLNRASPKDNFPLPHID+LVDNTAG+STFSFMDGFSGYN
Subjt:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN

Query:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG
        QIKMA EDREKTTFITLWGTFCYK M FGLKN GATY RAMVTLFHD+MHK+IEVYVDDMIAKSK  E+HT+ L+KLFDRLRK++LKLN +K  FGAT+G
Subjt:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG

Query:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC
        KLLGF+VS+EGIKVDPDKV+A +EM   +T+KE+RG LGRLNYI+RFISHLT TC+PIFKLLRKNN G   EDC+ AF+K+KQYLQ PPVL+PPT G+  
Subjt:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC

Query:  I
        I
Subjt:  I

A0A6J1D1K4 uncharacterized protein LOC1110161922.2e-17174.06Show/hide
Query:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE
        +ESD+E DDE     S ELLRM+ EE+++LGPH+EL E INLGSQ E+KEVKIGT+++SESRKKLI LL EY+ +FAWSYQD+P L TDIVVH++ +  E
Subjt:  MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSE

Query:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN
           VRQKLRKM+PD+LIKIK+EV+K+I+AGFLTVS YP+WVANIV VPKK+ + RMCVDYRDLNRASPKDNFPLPHID+LVDNT  +STFSFMDGF GYN
Subjt:  CNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYN

Query:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG
        QI+MA EDREKTTFITLWGTFCYK MPFGLKN GATY RAMV LFHD+MHKKIEVYVDDMIAKSK  E+HT+ L+KLFDRLRK++LKLNP+KY FGAT+G
Subjt:  QIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSG

Query:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC
        KLLGF+VS++GIKVDPDKV+A +EM    T+KE+RG LGRLNYI+RFISHLT TC+PIFKLLRKNN G W EDC+  F+KIK+YLQ PPVL+PPTLG+  
Subjt:  KLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSC

Query:  I
        I
Subjt:  I

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222311.3e-17175.45Show/hide
Query:  ISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPD
        +SSELLRM+EEE++ LGPH E  E +NLGSQ E KEVKIGT+++ ESRKKLI LL E++ +FAWSYQD+P L TDIVVH++P+  EC  VRQKLRKM+PD
Subjt:  ISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPD

Query:  VLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTF
        +LIK+K+EV+KQI+AGFLTVS YP+WVANIV VPKK+ + RMCVDYRDLNRASPKDNFPLPHID+LVDNTAG+STFSFMDGFSGYN+IKMA EDREKTTF
Subjt:  VLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTF

Query:  ITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKV
        ITLWGTFCYK M FGLKN GATY RAMVTLFHD+MHK+IEVYVDDMIAKS+  E+HT  L+KLF+RLRK+QLKLNP+K TFG TSGKLLGF+V +EGIKV
Subjt:  ITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKV

Query:  DPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSCI
        DPDKV+A +EM+  KT KE+RG LGRLNYI+RFISHLT TC+PIFKLLRKNN G W EDC+ AF+KIKQY QSPP+L+PPT G+  I
Subjt:  DPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSCI

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.68.1e-3830.14Show/hide
Query:  LTSESRKKLINLLREYSYIFAWSYQDLPRLS-TDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKD----
        L +E +++L  LL++Y  I    Y +  +L+ T+   H +  K   NL              +++ ++Q  +  G +  S  P + + I +VPKK     
Subjt:  LTSESRKKLINLLREYSYIFAWSYQDLPRLS-TDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKD----

Query:  -EKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMH
         +K R+ +DYR LN  +  D  P+P++D ++      + F+ +D   G++QI+M  E   KT F T  G + Y  MPFGLKN  AT+ R M  +   +++
Subjt:  -EKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMH

Query:  KKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISH
        K   VY+DD+I  S + ++H  +L  +F++L K  LKL   K  F       LG +++ +GIK +P+K+ A  +       KEI+  LG   Y  +FI +
Subjt:  KKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISH

Query:  LTPTCKPIFKLLRKN-NPGKWDEDCEEAFNKIKQYLQSPPVLIPP
             KP+ K L+KN      + + + AF K+K  +   P+L  P
Subjt:  LTPTCKPIFKLLRKN-NPGKWDEDCEEAFNKIKQYLQSPPVLIPP

P20825 Retrovirus-related Pol polyprotein from transposon 2973.4e-3629.11Show/hide
Query:  QELVEAINLGSQEESKEVKIG----TSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIKEEVQKQIEA
        Q   E+I    QE  K++         L  E   KL  LL ++  +    Y++  +L+    +  V   +  + +  K   +     I+++ +VQ+ +  
Subjt:  QELVEAINLGSQEESKEVKIG----TSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRKMKPDVLIKIKEEVQKQIEA

Query:  GFLTVSKYPKWVANIVLVPKKDE-----KGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYK
        G +  S  P + +   +VPKK +     K R+ +DYR LN  +  D +P+P++D ++        F+ +D   G++QI+M EE   KT F T  G + Y 
Subjt:  GFLTVSKYPKWVANIVLVPKKDE-----KGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYK

Query:  EMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKVDPDKVRATME
         MPFGL+N  AT+ R M  +   +++K   VY+DD+I  S +  +H ++++ +F +L    LKL   K  F       LG IV+ +GIK +P KV+A + 
Subjt:  EMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKVDPDKVRATME

Query:  MASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDE-DCEEAFNKIKQYLQSPPVLIPP
              +KEIR  LG   Y  +FI +     KP+   L+K       + +  EAF K+K  +   P+L  P
Subjt:  MASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDE-DCEEAFNKIKQYLQSPPVLIPP

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.9e-4234.49Show/hide
Query:  DLPRLSTDI----VVHRVPLKSECNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHI
        DLP    DI    V H + +K    L R +   +      +I + VQK ++  F+  SK P   + +VLVPKKD   R+CVDYR LN+A+  D FPLP I
Subjt:  DLPRLSTDI----VVHRVPLKSECNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHI

Query:  DMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKL
        D L+        F+ +D  SGY+QI M  +DR KT F+T  G + Y  MPFGL N  +T+ R M   F D+  + + VY+DD++  S++ E+H   L  +
Subjt:  DMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKL

Query:  FDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEA
         +RL+   L +   K  F +   + LG+ +  + I     K  A  +  + KT K+ +  LG +NY  RFI + +   +PI   +   +  +W E  ++A
Subjt:  FDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEA

Query:  FNKIKQYLQSPPVLIP
          K+K  L + PVL+P
Subjt:  FNKIKQYLQSPPVLIP

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus2.2e-3532.55Show/hide
Query:  IKIKEEVQKQIEA----GFLTVSKYPKWVANIVLVPKK-----DEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYNQIKMAEE
        + ++ EV++QI+     G +  S  P + + I +VPKK     +++ RM VD++ LN  +  D +P+P I+  + +      F+ +D  SG++QI M E 
Subjt:  IKIKEEVQKQIEA----GFLTVSKYPKWVANIVLVPKK-----DEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYNQIKMAEE

Query:  DREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIV
        D  KT F TL G + +  +PFGLKN  A + R +  +  + + K   VY+DD+I  S+  + H   L+ +   L K  L++N  K  F  T  + LG+IV
Subjt:  DREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIV

Query:  SEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLR-----------KNNPGKWDEDCEEAFNKIKQYLQSPPVLIPP
        + +GIK DP KVRA  EM    + KE++  LG  +Y  +FI       KP+  L R              P   DE   ++FN +K  L S  +L  P
Subjt:  SEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLR-----------KNNPGKWDEDCEEAFNKIKQYLQSPPVLIPP

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.1e-4234.49Show/hide
Query:  DLPRLSTDI----VVHRVPLKSECNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHI
        DLP    DI    V H + +K    L R +   +      +I + VQK ++  F+  SK P   + +VLVPKKD   R+CVDYR LN+A+  D FPLP I
Subjt:  DLPRLSTDI----VVHRVPLKSECNLVRQKLRKMKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHI

Query:  DMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKL
        D L+        F+ +D  SGY+QI M  +DR KT F+T  G + Y  MPFGL N  +T+ R M   F D+  + + VY+DD++  S++ E+H   L  +
Subjt:  DMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGTFCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKL

Query:  FDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEA
         +RL+   L +   K  F +   + LG+ +  + I     K  A  +  + KT K+ +  LG +NY  RFI + +   +PI   +   +  +W E  ++A
Subjt:  FDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKVDPDKVRATMEMASLKTEKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEA

Query:  FNKIKQYLQSPPVLIP
         +K+K  L + PVL+P
Subjt:  FNKIKQYLQSPPVLIP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTGACAAGGAAAGTGACGATGAAGATGATGTGGGAATATCCTCAGAATTGTTAAGAATGGTAGAAGAAGAAGATGAGGTTTTAGGTCCTCACCAAGAACTAGT
TGAAGCAATAAATTTGGGTTCTCAAGAGGAGTCAAAAGAGGTAAAAATTGGCACATCATTGACCAGTGAATCACGGAAAAAACTGATCAATTTGTTACGTGAGTATTCAT
ATATTTTTGCTTGGAGTTATCAGGATCTGCCAAGATTAAGTACGGATATTGTAGTACACCGAGTTCCTTTAAAATCAGAATGCAACCTAGTGAGACAAAAGCTACGTAAA
ATGAAACCTGATGTACTGATTAAAATAAAGGAGGAAGTACAGAAGCAAATTGAAGCAGGATTCCTCACAGTCTCCAAATATCCTAAATGGGTGGCAAACATTGTTCTAGT
GCCCAAAAAAGACGAAAAAGGGAGAATGTGTGTGGATTATAGAGATTTAAATCGAGCCAGTCCAAAAGATAACTTCCCTTTACCTCATATCGACATGTTGGTGGATAACA
CTGCAGGATACTCAACTTTCTCATTCATGGATGGTTTTTCAGGATATAATCAGATCAAAATGGCTGAAGAAGATAGAGAAAAAACGACATTCATTACCCTTTGGGGAACA
TTCTGCTACAAAGAAATGCCTTTTGGTTTGAAAAATGTTGGGGCAACATATCACCGAGCAATGGTTACACTTTTTCATGATATGATGCATAAAAAAATAGAGGTGTATGT
TGATGATATGATCGCAAAATCCAAGGCAGATGAAGATCATACAAGTACACTCAAAAAATTATTTGATCGGTTGAGAAAATATCAATTGAAATTAAATCCATCCAAATATA
CATTTGGGGCAACCTCAGGAAAGCTACTGGGATTCATCGTCAGTGAAGAAGGGATCAAAGTAGACCCAGATAAAGTAAGGGCTACCATGGAAATGGCATCCCTTAAAACA
GAAAAAGAAATTCGAGGTTTGCTAGGAAGATTGAACTACATATCCAGATTTATCTCACATTTAACACCAACATGCAAACCAATCTTCAAGCTCTTACGTAAAAACAACCC
AGGAAAATGGGATGAAGATTGTGAAGAAGCTTTCAACAAAATTAAGCAATATTTGCAGAGCCCACCAGTACTGATACCTCCAACTCTAGGGCAATCTTGTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCTGACAAGGAAAGTGACGATGAAGATGATGTGGGAATATCCTCAGAATTGTTAAGAATGGTAGAAGAAGAAGATGAGGTTTTAGGTCCTCACCAAGAACTAGT
TGAAGCAATAAATTTGGGTTCTCAAGAGGAGTCAAAAGAGGTAAAAATTGGCACATCATTGACCAGTGAATCACGGAAAAAACTGATCAATTTGTTACGTGAGTATTCAT
ATATTTTTGCTTGGAGTTATCAGGATCTGCCAAGATTAAGTACGGATATTGTAGTACACCGAGTTCCTTTAAAATCAGAATGCAACCTAGTGAGACAAAAGCTACGTAAA
ATGAAACCTGATGTACTGATTAAAATAAAGGAGGAAGTACAGAAGCAAATTGAAGCAGGATTCCTCACAGTCTCCAAATATCCTAAATGGGTGGCAAACATTGTTCTAGT
GCCCAAAAAAGACGAAAAAGGGAGAATGTGTGTGGATTATAGAGATTTAAATCGAGCCAGTCCAAAAGATAACTTCCCTTTACCTCATATCGACATGTTGGTGGATAACA
CTGCAGGATACTCAACTTTCTCATTCATGGATGGTTTTTCAGGATATAATCAGATCAAAATGGCTGAAGAAGATAGAGAAAAAACGACATTCATTACCCTTTGGGGAACA
TTCTGCTACAAAGAAATGCCTTTTGGTTTGAAAAATGTTGGGGCAACATATCACCGAGCAATGGTTACACTTTTTCATGATATGATGCATAAAAAAATAGAGGTGTATGT
TGATGATATGATCGCAAAATCCAAGGCAGATGAAGATCATACAAGTACACTCAAAAAATTATTTGATCGGTTGAGAAAATATCAATTGAAATTAAATCCATCCAAATATA
CATTTGGGGCAACCTCAGGAAAGCTACTGGGATTCATCGTCAGTGAAGAAGGGATCAAAGTAGACCCAGATAAAGTAAGGGCTACCATGGAAATGGCATCCCTTAAAACA
GAAAAAGAAATTCGAGGTTTGCTAGGAAGATTGAACTACATATCCAGATTTATCTCACATTTAACACCAACATGCAAACCAATCTTCAAGCTCTTACGTAAAAACAACCC
AGGAAAATGGGATGAAGATTGTGAAGAAGCTTTCAACAAAATTAAGCAATATTTGCAGAGCCCACCAGTACTGATACCTCCAACTCTAGGGCAATCTTGTATTTAA
Protein sequenceShow/hide protein sequence
MESDKESDDEDDVGISSELLRMVEEEDEVLGPHQELVEAINLGSQEESKEVKIGTSLTSESRKKLINLLREYSYIFAWSYQDLPRLSTDIVVHRVPLKSECNLVRQKLRK
MKPDVLIKIKEEVQKQIEAGFLTVSKYPKWVANIVLVPKKDEKGRMCVDYRDLNRASPKDNFPLPHIDMLVDNTAGYSTFSFMDGFSGYNQIKMAEEDREKTTFITLWGT
FCYKEMPFGLKNVGATYHRAMVTLFHDMMHKKIEVYVDDMIAKSKADEDHTSTLKKLFDRLRKYQLKLNPSKYTFGATSGKLLGFIVSEEGIKVDPDKVRATMEMASLKT
EKEIRGLLGRLNYISRFISHLTPTCKPIFKLLRKNNPGKWDEDCEEAFNKIKQYLQSPPVLIPPTLGQSCI