; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0222941 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0222941
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr08:12077042..12077680
RNA-Seq ExpressionCmc08g0222941
SyntenyCmc08g0222941
Gene Ontology termsGO:0007034 - vacuolar transport (biological process)
GO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0005768 - endosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033505.1 peroxidase 64 [Cucumis melo var. makuwa]6.7e-8168.84Show/hide
Query:  MEKLVDEMMISRIIH----SYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG
        MEKLV+EM+ S +I      YSN VLLVKKKDGSWRFCVDYRA+NN+T+PDKF IPV+EELFDELNGA LFSKI++K GYH+IRM ++DI KTAFRTHEG
Subjt:  MEKLVDEMMISRIIH----SYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG

Query:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI
        HYEFLVMPF L NVP TFQ+LMN++F+ YLRKFVL FF+DIL+YN+  + H+ HL +V   L EH LY N+K  +FA  ++EYLGHI+SG GVEVDPEKI
Subjt:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI

Query:  RSIKHWPVPKNVREV
        RSI +WPVP+N RE+
Subjt:  RSIKHWPVPKNVREV

KAA0037155.1 peroxidase 64 [Cucumis melo var. makuwa]3.6e-9079.53Show/hide
Query:  MEKLVDEMMISRIIH----SYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG
        MEKLVDEMM S II      YS+LVLLVKK DGSWRFC++YRALNN+TVPDKF IPVIEELFDELNGANLFSKI++K GYH+IRMHKEDIEKTAFRTHEG
Subjt:  MEKLVDEMMISRIIH----SYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG

Query:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI
        HYEFLVMPF L N P TFQSL+NS+FR YLRKFVL FF+ IL+Y+RGM+ H YHLELVLEVL EH+LY NKK  NFAY KVEYLGHIVSG GVEVDPEKI
Subjt:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI

Query:  RSIKHWPVPKNVREV
        RSIK WPV KN  EV
Subjt:  RSIKHWPVPKNVREV

KAA0061363.1 peroxidase 64 [Cucumis melo var. makuwa]1.0e-8174.42Show/hide
Query:  MEKLVDEMMISRIIH----SYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG
        ME+LVDEM+ S II      YS+ VLLVKKKDGS   C DYRA NN T+  KF I VIEELFDELNGANLFSKI++KVGYH+IR HKED EKTAFRTHEG
Subjt:  MEKLVDEMMISRIIH----SYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG

Query:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI
        HYEFL+MPF L N P TFQSLMNSIFRSY+RKFVL FF+DIL+Y+RGM+ H+YHLELVLEVL EH+LY NKK  +FA+ KVEYLGHIVSG GVEVDPEK 
Subjt:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI

Query:  RSIKHWPVPKNVREV
        RSIK W VP NVRE+
Subjt:  RSIKHWPVPKNVREV

KAA0066147.1 Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]1.4e-8173.95Show/hide
Query:  MEKLVDEMMISRIIHS----YSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG
        MEKLVDEM+ S IIH     YS  VLLVKKKDG+WRFCVDYRALNN  + DKF IP IEELF+ELNGANLFSKI++K GYH+IRM +EDIEKTAFRTHEG
Subjt:  MEKLVDEMMISRIIHS----YSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG

Query:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI
        HYEFLVMPF L N PTTFQSLMNSIFR YLRKFVL FF+D L+Y++G++ H++H+ELVLE   E+ LY NKK  NFAY KVEYLGH++S  GVEVD EKI
Subjt:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI

Query:  RSIKHWPVPKNVREV
        RSIK WPVP NVREV
Subjt:  RSIKHWPVPKNVREV

TYK14463.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]9.7e-8070.23Show/hide
Query:  MEKLVDEMMISRII----HSYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG
        MEK V+EM+ S II      YS+ VLLV+KKD SWRFCVDYRALNN T+PDKF IPVIEELFDELNGA  FSKI++K GYH+IRM  +DIEKTAFRTHEG
Subjt:  MEKLVDEMMISRII----HSYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG

Query:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI
        HYEF+VMPF L N P+TFQSLMNSIF+SYLRKFVL FF+DIL+Y++ +++H+ HL L L+VL +++LY N+K  +FA  KV+YLGHI+SG GVEVDPEKI
Subjt:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI

Query:  RSIKHWPVPKNVREV
        R+IK WP PKNVREV
Subjt:  RSIKHWPVPKNVREV

TrEMBL top hitse value%identityAlignment
A0A5A7T6Q1 Peroxidase 641.7e-9079.53Show/hide
Query:  MEKLVDEMMISRIIH----SYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG
        MEKLVDEMM S II      YS+LVLLVKK DGSWRFC++YRALNN+TVPDKF IPVIEELFDELNGANLFSKI++K GYH+IRMHKEDIEKTAFRTHEG
Subjt:  MEKLVDEMMISRIIH----SYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG

Query:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI
        HYEFLVMPF L N P TFQSL+NS+FR YLRKFVL FF+ IL+Y+RGM+ H YHLELVLEVL EH+LY NKK  NFAY KVEYLGHIVSG GVEVDPEKI
Subjt:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI

Query:  RSIKHWPVPKNVREV
        RSIK WPV KN  EV
Subjt:  RSIKHWPVPKNVREV

A0A5A7VGE3 Transposon Tf2-6 polyprotein6.6e-8273.95Show/hide
Query:  MEKLVDEMMISRIIHS----YSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG
        MEKLVDEM+ S IIH     YS  VLLVKKKDG+WRFCVDYRALNN  + DKF IP IEELF+ELNGANLFSKI++K GYH+IRM +EDIEKTAFRTHEG
Subjt:  MEKLVDEMMISRIIHS----YSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG

Query:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI
        HYEFLVMPF L N PTTFQSLMNSIFR YLRKFVL FF+D L+Y++G++ H++H+ELVLE   E+ LY NKK  NFAY KVEYLGH++S  GVEVD EKI
Subjt:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI

Query:  RSIKHWPVPKNVREV
        RSIK WPVP NVREV
Subjt:  RSIKHWPVPKNVREV

A0A5D3CRH2 Ty3/gypsy retrotransposon protein4.7e-8070.23Show/hide
Query:  MEKLVDEMMISRII----HSYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG
        MEK V+EM+ S II      YS+ VLLV+KKD SWRFCVDYRALNN T+PDKF IPVIEELFDELNGA  FSKI++K GYH+IRM  +DIEKTAFRTHEG
Subjt:  MEKLVDEMMISRII----HSYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG

Query:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI
        HYEF+VMPF L N P+TFQSLMNSIF+SYLRKFVL FF+DIL+Y++ +++H+ HL L L+VL +++LY N+K  +FA  KV+YLGHI+SG GVEVDPEKI
Subjt:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI

Query:  RSIKHWPVPKNVREV
        R+IK WP PKNVREV
Subjt:  RSIKHWPVPKNVREV

A0A5D3CU29 Peroxidase 645.0e-8274.42Show/hide
Query:  MEKLVDEMMISRIIH----SYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG
        ME+LVDEM+ S II      YS+ VLLVKKKDGS   C DYRA NN T+  KF I VIEELFDELNGANLFSKI++KVGYH+IR HKED EKTAFRTHEG
Subjt:  MEKLVDEMMISRIIH----SYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG

Query:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI
        HYEFL+MPF L N P TFQSLMNSIFRSY+RKFVL FF+DIL+Y+RGM+ H+YHLELVLEVL EH+LY NKK  +FA+ KVEYLGHIVSG GVEVDPEK 
Subjt:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI

Query:  RSIKHWPVPKNVREV
        RSIK W VP NVRE+
Subjt:  RSIKHWPVPKNVREV

A0A5D3DST3 Peroxidase 643.3e-8168.84Show/hide
Query:  MEKLVDEMMISRIIH----SYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG
        MEKLV+EM+ S +I      YSN VLLVKKKDGSWRFCVDYRA+NN+T+PDKF IPV+EELFDELNGA LFSKI++K GYH+IRM ++DI KTAFRTHEG
Subjt:  MEKLVDEMMISRIIH----SYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEG

Query:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI
        HYEFLVMPF L NVP TFQ+LMN++F+ YLRKFVL FF+DIL+YN+  + H+ HL +V   L EH LY N+K  +FA  ++EYLGHI+SG GVEVDPEKI
Subjt:  HYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKI

Query:  RSIKHWPVPKNVREV
        RSI +WPVP+N RE+
Subjt:  RSIKHWPVPKNVREV

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.62.2e-3436.36Show/hide
Query:  MEKLVDEMMISRIIHS----YSNLVLLV-KKKDGS----WRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAF
        +E  + +M+   II +    Y++ + +V KK+D S    +R  +DYR LN  TV D+  IP ++E+  +L   N F+ I++  G+H+I M  E + KTAF
Subjt:  MEKLVDEMMISRIIHS----YSNLVLLV-KKKDGS----WRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAF

Query:  RTHEGHYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEV
         T  GHYE+L MPF L N P TFQ  MN I R  L K  L + +DI+V++  +  H+  L LV E L +  L        F   +  +LGH+++ +G++ 
Subjt:  RTHEGHYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEV

Query:  DPEKIRSIKHWPVPKNVREV
        +PEKI +I+ +P+P   +E+
Subjt:  DPEKIRSIKHWPVPKNVREV

P20825 Retrovirus-related Pol polyprotein from transposon 2971.1e-3334.55Show/hide
Query:  MEKLVDEMMISRIIHS----YSNLVLLVKKKD-----GSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAF
        +E  V EM+   +I      Y++   +V KK        +R  +DYR LN  T+PD++ IP ++E+  +L     F+ I++  G+H+I M +E I KTAF
Subjt:  MEKLVDEMMISRIIHS----YSNLVLLVKKKD-----GSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAF

Query:  RTHEGHYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEV
         T  GHYE+L MPF L N P TFQ  MN+I R  L K  L + +DI++++  +  H+  ++LV   L +  L        F   +  +LGHIV+ +G++ 
Subjt:  RTHEGHYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEV

Query:  DPEKIRSIKHWPVPKNVREV
        +P K+++I  +P+P   +E+
Subjt:  DPEKIRSIKHWPVPKNVREV

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein2.6e-3538.1Show/hide
Query:  MEKLVDEMMISRIIHSYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEGHYEF
        ++KL+D   I       S+ V+LV KKDG++R CVDYR LN +T+ D F +P I+ L   +  A +F+ +++  GYH+I M  +D  KTAF T  G YE+
Subjt:  MEKLVDEMMISRIIHSYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEGHYEF

Query:  LVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKIRSIK
         VMPF L+N P+TF   M   FR    +FV  + +DIL+++   + H  HL+ VLE L    L   KK   FA  + E+LG+ +    +     K  +I+
Subjt:  LVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKIRSIK

Query:  HWPVPKNVRE
         +P PK V++
Subjt:  HWPVPKNVRE

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus2.4e-3335Show/hide
Query:  MEKLVDEMMISRIIH----SYSNLVLLVKKK-----DGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAF
        +E+ +DE++   II      Y++ + +V KK     +  +R  VD++ LN  T+PD + IP I      L  A  F+ +++  G+H+I M + DI KTAF
Subjt:  MEKLVDEMMISRIIH----SYSNLVLLVKKK-----DGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAF

Query:  RTHEGHYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEV
         T  G YEFL +PF L N P  FQ +++ I R ++ K    + +DI+V++     H  +L LVL  L +  L  N +  +F   +VE+LG+IV+ +G++ 
Subjt:  RTHEGHYEFLVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEV

Query:  DPEKIRSIKHWPVPKNVREV
        DP+K+R+I   P P +V+E+
Subjt:  DPEKIRSIKHWPVPKNVREV

Q99315 Transposon Ty3-G Gag-Pol polyprotein2.6e-3538.1Show/hide
Query:  MEKLVDEMMISRIIHSYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEGHYEF
        ++KL+D   I       S+ V+LV KKDG++R CVDYR LN +T+ D F +P I+ L   +  A +F+ +++  GYH+I M  +D  KTAF T  G YE+
Subjt:  MEKLVDEMMISRIIHSYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEGHYEF

Query:  LVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKIRSIK
         VMPF L+N P+TF   M   FR    +FV  + +DIL+++   + H  HL+ VLE L    L   KK   FA  + E+LG+ +    +     K  +I+
Subjt:  LVMPFRLINVPTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKIRSIK

Query:  HWPVPKNVRE
         +P PK V++
Subjt:  HWPVPKNVRE

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein3.0e-1043.75Show/hide
Query:  HLELVLEVLHEHQLYTNKKNFNFAYHKVEYLG--HIVSGNGVEVDPEKIRSIKHWPVPKNVREV
        HL +VL++  +HQ Y N+K   F   ++ YLG  HI+SG GV  DP K+ ++  WP PKN  E+
Subjt:  HLELVLEVLHEHQLYTNKKNFNFAYHKVEYLG--HIVSGNGVEVDPEKIRSIKHWPVPKNVREV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAACTTGTAGACGAAATGATGATTTCAAGGATAATACATTCATACTCCAATCTAGTGTTATTGGTGAAGAAAAAAGATGGAAGCTGGAGATTTTGTGTGGACTA
TCGTGCTCTCAATAATTCAACTGTGCCAGATAAGTTTCTTATCCCTGTTATTGAGGAATTGTTTGATGAATTAAATGGTGCTAATTTATTTTCTAAGATTAATATAAAGG
TTGGTTATCACCGGATTAGGATGCATAAGGAAGATATTGAAAAAACCGCCTTTAGAACCCATGAGGGACACTATGAGTTCCTTGTGATGCCCTTTAGGTTAATAAATGTG
CCGACTACATTTCAGTCCCTCATGAACTCTATATTTCGTTCTTATCTGAGGAAGTTTGTTCTATTTTTTTTTAATGATATATTGGTATACAACAGGGGTATGAAAGCACA
TGTGTATCATTTGGAGTTAGTGTTGGAAGTATTACATGAACATCAATTATATACAAACAAGAAAAATTTTAACTTTGCATATCATAAGGTAGAATATCTGGGCCATATTG
TTTCAGGAAATGGTGTAGAGGTTGATCCTGAAAAGATAAGGTCTATCAAACACTGGCCTGTGCCTAAAAATGTGAGGGAAGTTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAACTTGTAGACGAAATGATGATTTCAAGGATAATACATTCATACTCCAATCTAGTGTTATTGGTGAAGAAAAAAGATGGAAGCTGGAGATTTTGTGTGGACTA
TCGTGCTCTCAATAATTCAACTGTGCCAGATAAGTTTCTTATCCCTGTTATTGAGGAATTGTTTGATGAATTAAATGGTGCTAATTTATTTTCTAAGATTAATATAAAGG
TTGGTTATCACCGGATTAGGATGCATAAGGAAGATATTGAAAAAACCGCCTTTAGAACCCATGAGGGACACTATGAGTTCCTTGTGATGCCCTTTAGGTTAATAAATGTG
CCGACTACATTTCAGTCCCTCATGAACTCTATATTTCGTTCTTATCTGAGGAAGTTTGTTCTATTTTTTTTTAATGATATATTGGTATACAACAGGGGTATGAAAGCACA
TGTGTATCATTTGGAGTTAGTGTTGGAAGTATTACATGAACATCAATTATATACAAACAAGAAAAATTTTAACTTTGCATATCATAAGGTAGAATATCTGGGCCATATTG
TTTCAGGAAATGGTGTAGAGGTTGATCCTGAAAAGATAAGGTCTATCAAACACTGGCCTGTGCCTAAAAATGTGAGGGAAGTTTGTTGA
Protein sequenceShow/hide protein sequence
MEKLVDEMMISRIIHSYSNLVLLVKKKDGSWRFCVDYRALNNSTVPDKFLIPVIEELFDELNGANLFSKINIKVGYHRIRMHKEDIEKTAFRTHEGHYEFLVMPFRLINV
PTTFQSLMNSIFRSYLRKFVLFFFNDILVYNRGMKAHVYHLELVLEVLHEHQLYTNKKNFNFAYHKVEYLGHIVSGNGVEVDPEKIRSIKHWPVPKNVREVC