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Cmc08g0223011 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0223011
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
Genome locationCMiso1.1chr08:12205312..12206627
RNA-Seq ExpressionCmc08g0223011
SyntenyCmc08g0223011
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7810249.1 methyl-CpG-binding domain-containing protein 13-like [Senna tora]9.8e-0449.23Show/hide
Query:  STKVLGGEPENWHSSLPPQSPVSQIPCPVLSNLQLVLPQILPV-VGEGNFKSQVWFVSRRRPPPG
        S  VLGG P   H   P QSPV   P PV S LQ V PQ+  + V  G +   +W +SRRRPPPG
Subjt:  STKVLGGEPENWHSSLPPQSPVSQIPCPVLSNLQLVLPQILPV-VGEGNFKSQVWFVSRRRPPPG

KAF9827529.1 hypothetical protein H0E87_017050, partial [Populus deltoides]2.0e-0944.55Show/hide
Query:  DLGFNSTGILNPSTRDMPNISKFLPWFNENSTKVLGGEPENWHSSLPPQSPVSQIPCPVLSNLQLVLPQI-------LPVVGEGNFKSQVWFVSRRRPPP
        D G  S G LNPSTRDM   SK L  F   S  V GG P+ WH   P QSPVS +P P  S L LV PQI         V+   +  S +W      PPP
Subjt:  DLGFNSTGILNPSTRDMPNISKFLPWFNENSTKVLGGEPENWHSSLPPQSPVSQIPCPVLSNLQLVLPQI-------LPVVGEGNFKSQVWFVSRRRPPP

Query:  G
        G
Subjt:  G

KAG5539682.1 hypothetical protein RHGRI_020030 [Rhododendron griersonianum]4.7e-1449.07Show/hide
Query:  MSAVQPTTLLHPLDLGFNSTGILNPSTRDMPNISKFLPWFNENSTKVLGGEPENWHSSLPPQSPVSQIPCPVLSNLQLVLPQI-LPVVGEGNFKSQVWFV
        MSAV     +HP ++G  S G LNPSTRDM   SKF  WF+  S  VLGG P   HS  PPQSPV   P P  S LQ V      P V  G    QV  +
Subjt:  MSAVQPTTLLHPLDLGFNSTGILNPSTRDMPNISKFLPWFNENSTKVLGGEPENWHSSLPPQSPVSQIPCPVLSNLQLVLPQI-LPVVGEGNFKSQVWFV

Query:  SRRRPPPG
         R RPPPG
Subjt:  SRRRPPPG

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCGGTGCAACCCACGACCCTGTTGCATCCCTTAGACTTGGGTTTCAATTCCACTGGTATATTGAACCCGTCCACTAGAGATATGCCAAATATATCCAAA
TTCTTGCCTTGGTTTAACGAAAATTCAACCAAAGTATTGGGTGGTGAGCCGGAGAATTGGCATTCAAGTTTGCCGCCGCAGTCGCCAGTTTCGCAAATTCCGTGC
CCTGTACTGTCAAACTTGCAATTGGTTCTGCCCCAGATTCTTCCCGTTGTAGGGGAGGGTAATTTCAAGAGCCAAGTCTGGTTTGTGTCCAGACGTCGTCCACCG
CCGGGGTAG
mRNA sequenceShow/hide mRNA sequence
CCTTTAGATGTAAAGGACTGGACATGGAACCTATAATAGGAAATGGAGATCCCACATCACTTGCAAGACTTTGGTTGCAAGGGACACTGTTAAAGAAGAAAAAAT
CCAAAACCATAACTAGTTAGTAGGGCAGAAAAGGACGTGGTAGCCAGTGGCACCAGTGGAGGGACACGTGAATGTGCTGGTTGCGTCATCGGTTGGACTTGGCAG
GGGTTGTTGCACCCACCATCTGCCTTCAACGCCTCTGGGCACTCCCCATTGATGTCAGCGGTGCAACCCACGACCCTGTTGCATCCCTTAGACTTGGGTTTCAAT
TCCACTGGTATATTGAACCCGTCCACTAGAGATATGCCAAATATATCCAAATTCTTGCCTTGGTTTAACGAAAATTCAACCAAAGTATTGGGTGGTGAGCCGGAG
AATTGGCATTCAAGTTTGCCGCCGCAGTCGCCAGTTTCGCAAATTCCGTGCCCTGTACTGTCAAACTTGCAATTGGTTCTGCCCCAGATTCTTCCCGTTGTAGGG
GAGGGTAATTTCAAGAGCCAAGTCTGGTTTGTGTCCAGACGTCGTCCACCGCCGGGGTAGGCCGCTGCCCATACTGTGTAGGGGCAGTTATTGAGAACAGTGAAA
GTGGAGAAACTGTCTTGTGGAATTAATGCACATCTTGTGATGAAACCAACACCGGTGTTTGCCATTGAGCCGAAGGGGAGAAGGGATCGGTCAAAATTTGGATCC
ATTTTCATTATTTGAGCTTCAATTAAGTCATCCTTTATCATAACAGAAACAGAAATGAAAATGGAAATGGAAATGGAAATGGAAATGTGATGTTTGCAGCAAAAC
AAGAACATGGCTGGAATTTGGTGGATATCTGAGTTGACCCAATAATCACTAACAATTGAATTTGTGTTTTTAAACAACTTTAAAAAAAGAAAAATATGTGGTGGC
GGTGGGATCCTATCTTTTCCCCACCAATTAAAAAATAAACCCTACATTTTGAATTTCGTTAACAAAAAAAAATTAAATTAAATGAATTACATGTTGATGAAAGTA
ACCAAAACCGGTCTGTTCATTACCTGTTCTAAAATGAAAATCCTACTTGTTTTTTTTTTTTATTAATTTAAAACAATATGTATTTAACTTTTAACAATCTGATCA
ATTAATTTTTCTCTATGATAATTTTTCTATATGATATGATATTTTTTTTTCATTTGAC
Protein sequenceShow/hide protein sequence
MSAVQPTTLLHPLDLGFNSTGILNPSTRDMPNISKFLPWFNENSTKVLGGEPENWHSSLPPQSPVSQIPCPVLSNLQLVLPQILPVVGEGNFKSQVWFVSRRRPP
PG