; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0223051 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0223051
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr08:12251741..12252856
RNA-Seq ExpressionCmc08g0223051
SyntenyCmc08g0223051
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035890.1 pol protein [Cucumis melo var. makuwa]3.6e-17890.62Show/hide
Query:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA
        MRQRRWLELVKDYDCEILYH GKANVVADALSRKVAHSA LITKQ PLLRD ERAEIAVSVGEVT+QLAQL+VQPTLRQ+II AQLNDPYL EK  +VE 
Subjt:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA

Query:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK
        GQ +DFSISSDDGL F+GRLCVPEDSAVK+ELL EAHSSPF+MHP STKMYQDLR VYWWR MKREVA+FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWK
Subjt:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD
        WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHF+ GKSTYTASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQLAL TRLDFSTTFHPQTD
Subjt:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD

Query:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR
        GQTERLNQ+LEDMLRACVLEFS SWDSHLHLMEFAYNNSY+
Subjt:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR

KAA0040942.1 pol protein [Cucumis melo var. makuwa]6.7e-17790.03Show/hide
Query:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA
        MRQRRWLELVKDYDCEILYH GKANVVADALSRKVAHSA LITKQ PLLRD ERAEIAVSVGEVT+QLAQL+VQPTLRQ+II AQLNDPYL EK  +VE 
Subjt:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA

Query:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK
        GQ +DFSISSDDGL F+GRLCVPEDSAVK ELL EAHSSPF+MHP STKMYQDLR VYWWR MKREVA+FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWK
Subjt:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD
        WESVSMDFITGLPKTLKG+TVIWVVVDRLTKSAHF+ GKSTYTASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQLAL TRLDFST FHPQTD
Subjt:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD

Query:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR
        GQTERLNQ+LEDMLRACVLEFS SWDSHLHLMEFAYNNSY+
Subjt:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR

KAA0041490.1 hypothetical protein E6C27_scaffold6G00780 [Cucumis melo var. makuwa]1.6e-17891.2Show/hide
Query:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA
        MR RRWLELVKDYDCEILYH GKANVVADALSRKVAHSA LITKQAPLLRD ERAEIAVSVGEVTSQLAQL+VQPTLRQRIIVAQLNDPYLVEK  LVE 
Subjt:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA

Query:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK
        GQ +DFSIS DDGL F+GRLCVPEDSAVK ELL EAHSSPF+MHP STKMYQDLR VYWWRNMKREVA+FVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK
Subjt:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD
        WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHF+ GKSTYTASKWGQLYMTEIVRLHGVPVSI+SDRD RFTSKFWKGLQLAL TRLDFST FHPQTD
Subjt:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD

Query:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR
        G+T+RLNQ+LEDMLRACVLEFS SWDSHLHLMEFAYNNSY+
Subjt:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR

KAA0045309.1 pol protein [Cucumis melo var. makuwa]1.1e-17689.74Show/hide
Query:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA
        MRQRRWLELVKDYDCEILYH GKANVVAD+LSRKVAHSA LITKQ PLLRD ERAEIAVSVGEVT+QLAQL+VQPTLRQ+II AQLNDPYL EK  +VE 
Subjt:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA

Query:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK
        GQ +DFSISSDDGL F+GRLCVPEDSAVK ELL EAHSSPF+MHP STKMYQDLR VYWWR MKREVA+FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWK
Subjt:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD
        WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHF+ GKSTYTASKWGQLY+TEIVRLHGVPVSI+SDRDARFTSKFWKGLQLAL TRLDFST FHPQTD
Subjt:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD

Query:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR
        GQTERLNQ+LEDMLRACVLEFS SWDSHLHLMEFAYNNSY+
Subjt:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR

KAA0063098.1 pol protein [Cucumis melo var. makuwa]1.5e-17689.74Show/hide
Query:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA
        MRQRRWLELVKDYDCEILYH GKANVVADALSRKVAHSA LITKQ PLLRD ERAEI VSVGEVT+QLAQL+VQPTLRQ+II AQLNDPYL EK  +VE 
Subjt:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA

Query:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK
        GQ +DFSISSDDGL F+GRLCVPEDSAVK ELL EAHSSPF+MHP STKMYQDLR VYWWR MKREVA+FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWK
Subjt:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD
        WESVSMDFITGLPKT KGYTVIWVVVDRLTKSAHF+ GKSTYTASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQLAL TRLDFST FHPQTD
Subjt:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD

Query:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR
        GQTERLNQ+LEDMLRACVLEFS SWDSHLHLMEFAYNNSY+
Subjt:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR

TrEMBL top hitse value%identityAlignment
A0A5A7SXW6 Reverse transcriptase1.7e-17890.62Show/hide
Query:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA
        MRQRRWLELVKDYDCEILYH GKANVVADALSRKVAHSA LITKQ PLLRD ERAEIAVSVGEVT+QLAQL+VQPTLRQ+II AQLNDPYL EK  +VE 
Subjt:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA

Query:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK
        GQ +DFSISSDDGL F+GRLCVPEDSAVK+ELL EAHSSPF+MHP STKMYQDLR VYWWR MKREVA+FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWK
Subjt:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD
        WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHF+ GKSTYTASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQLAL TRLDFSTTFHPQTD
Subjt:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD

Query:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR
        GQTERLNQ+LEDMLRACVLEFS SWDSHLHLMEFAYNNSY+
Subjt:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR

A0A5A7TBV4 Pol protein3.3e-17790.03Show/hide
Query:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA
        MRQRRWLELVKDYDCEILYH GKANVVADALSRKVAHSA LITKQ PLLRD ERAEIAVSVGEVT+QLAQL+VQPTLRQ+II AQLNDPYL EK  +VE 
Subjt:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA

Query:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK
        GQ +DFSISSDDGL F+GRLCVPEDSAVK ELL EAHSSPF+MHP STKMYQDLR VYWWR MKREVA+FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWK
Subjt:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD
        WESVSMDFITGLPKTLKG+TVIWVVVDRLTKSAHF+ GKSTYTASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQLAL TRLDFST FHPQTD
Subjt:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD

Query:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR
        GQTERLNQ+LEDMLRACVLEFS SWDSHLHLMEFAYNNSY+
Subjt:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR

A0A5A7TDX1 Reverse transcriptase7.8e-17991.2Show/hide
Query:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA
        MR RRWLELVKDYDCEILYH GKANVVADALSRKVAHSA LITKQAPLLRD ERAEIAVSVGEVTSQLAQL+VQPTLRQRIIVAQLNDPYLVEK  LVE 
Subjt:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA

Query:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK
        GQ +DFSIS DDGL F+GRLCVPEDSAVK ELL EAHSSPF+MHP STKMYQDLR VYWWRNMKREVA+FVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK
Subjt:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD
        WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHF+ GKSTYTASKWGQLYMTEIVRLHGVPVSI+SDRD RFTSKFWKGLQLAL TRLDFST FHPQTD
Subjt:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD

Query:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR
        G+T+RLNQ+LEDMLRACVLEFS SWDSHLHLMEFAYNNSY+
Subjt:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR

A0A5A7TVN9 Reverse transcriptase5.6e-17789.74Show/hide
Query:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA
        MRQRRWLELVKDYDCEILYH GKANVVAD+LSRKVAHSA LITKQ PLLRD ERAEIAVSVGEVT+QLAQL+VQPTLRQ+II AQLNDPYL EK  +VE 
Subjt:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA

Query:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK
        GQ +DFSISSDDGL F+GRLCVPEDSAVK ELL EAHSSPF+MHP STKMYQDLR VYWWR MKREVA+FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWK
Subjt:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD
        WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHF+ GKSTYTASKWGQLY+TEIVRLHGVPVSI+SDRDARFTSKFWKGLQLAL TRLDFST FHPQTD
Subjt:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD

Query:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR
        GQTERLNQ+LEDMLRACVLEFS SWDSHLHLMEFAYNNSY+
Subjt:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR

A0A5A7V646 Reverse transcriptase7.3e-17789.74Show/hide
Query:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA
        MRQRRWLELVKDYDCEILYH GKANVVADALSRKVAHSA LITKQ PLLRD ERAEI VSVGEVT+QLAQL+VQPTLRQ+II AQLNDPYL EK  +VE 
Subjt:  MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEA

Query:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK
        GQ +DFSISSDDGL F+GRLCVPEDSAVK ELL EAHSSPF+MHP STKMYQDLR VYWWR MKREVA+FVSRCLVCQQVKAPRQ PAGLLQPLSVPGWK
Subjt:  GQSQDFSISSDDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWK

Query:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD
        WESVSMDFITGLPKT KGYTVIWVVVDRLTKSAHF+ GKSTYTASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQLAL TRLDFST FHPQTD
Subjt:  WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTD

Query:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR
        GQTERLNQ+LEDMLRACVLEFS SWDSHLHLMEFAYNNSY+
Subjt:  GQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNSYR

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.5e-4129.41Show/hide
Query:  RQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEAG
        R  RW   ++D++ EI Y  G AN +ADALSR       ++ +  P+ +D E   I        + + Q+++    + +++    ND  L+  +LL    
Subjt:  RQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEAG

Query:  QSQDFSISSDDGLTFDGR--LCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGW
        +  + +I   DGL  + +  + +P D+ +   ++ + H     +HP    +   +   + W+ +++++  +V  C  CQ  K+   +P G LQP+     
Subjt:  QSQDFSISSDDGLTFDGR--LCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGW

Query:  KWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQT
         WES+SMDFIT LP++  GY  ++VVVDR +K A  +    + TA +  +++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Subjt:  KWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQT

Query:  DGQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNS
        DGQTER NQ +E +LR        +W  H+ L++ +YNN+
Subjt:  DGQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNS

P0CT35 Transposon Tf2-2 polyprotein1.5e-4129.41Show/hide
Query:  RQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEAG
        R  RW   ++D++ EI Y  G AN +ADALSR       ++ +  P+ +D E   I        + + Q+++    + +++    ND  L+  +LL    
Subjt:  RQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEAG

Query:  QSQDFSISSDDGLTFDGR--LCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGW
        +  + +I   DGL  + +  + +P D+ +   ++ + H     +HP    +   +   + W+ +++++  +V  C  CQ  K+   +P G LQP+     
Subjt:  QSQDFSISSDDGLTFDGR--LCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGW

Query:  KWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQT
         WES+SMDFIT LP++  GY  ++VVVDR +K A  +    + TA +  +++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Subjt:  KWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQT

Query:  DGQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNS
        DGQTER NQ +E +LR        +W  H+ L++ +YNN+
Subjt:  DGQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNS

P0CT36 Transposon Tf2-3 polyprotein1.5e-4129.41Show/hide
Query:  RQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEAG
        R  RW   ++D++ EI Y  G AN +ADALSR       ++ +  P+ +D E   I        + + Q+++    + +++    ND  L+  +LL    
Subjt:  RQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEAG

Query:  QSQDFSISSDDGLTFDGR--LCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGW
        +  + +I   DGL  + +  + +P D+ +   ++ + H     +HP    +   +   + W+ +++++  +V  C  CQ  K+   +P G LQP+     
Subjt:  QSQDFSISSDDGLTFDGR--LCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGW

Query:  KWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQT
         WES+SMDFIT LP++  GY  ++VVVDR +K A  +    + TA +  +++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Subjt:  KWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQT

Query:  DGQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNS
        DGQTER NQ +E +LR        +W  H+ L++ +YNN+
Subjt:  DGQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNS

P0CT41 Transposon Tf2-12 polyprotein1.5e-4129.41Show/hide
Query:  RQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEAG
        R  RW   ++D++ EI Y  G AN +ADALSR       ++ +  P+ +D E   I        + + Q+++    + +++    ND  L+  +LL    
Subjt:  RQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEAG

Query:  QSQDFSISSDDGLTFDGR--LCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGW
        +  + +I   DGL  + +  + +P D+ +   ++ + H     +HP    +   +   + W+ +++++  +V  C  CQ  K+   +P G LQP+     
Subjt:  QSQDFSISSDDGLTFDGR--LCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGW

Query:  KWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQT
         WES+SMDFIT LP++  GY  ++VVVDR +K A  +    + TA +  +++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Subjt:  KWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQT

Query:  DGQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNS
        DGQTER NQ +E +LR        +W  H+ L++ +YNN+
Subjt:  DGQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNS

Q9UR07 Transposon Tf2-11 polyprotein1.5e-4129.41Show/hide
Query:  RQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEAG
        R  RW   ++D++ EI Y  G AN +ADALSR       ++ +  P+ +D E   I        + + Q+++    + +++    ND  L+  +LL    
Subjt:  RQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEAG

Query:  QSQDFSISSDDGLTFDGR--LCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGW
        +  + +I   DGL  + +  + +P D+ +   ++ + H     +HP    +   +   + W+ +++++  +V  C  CQ  K+   +P G LQP+     
Subjt:  QSQDFSISSDDGLTFDGR--LCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGW

Query:  KWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQT
         WES+SMDFIT LP++  GY  ++VVVDR +K A  +    + TA +  +++   ++   G P  I++D D  FTS+ WK         + FS  + PQT
Subjt:  KWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQT

Query:  DGQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNS
        DGQTER NQ +E +LR        +W  H+ L++ +YNN+
Subjt:  DGQTERLNQVLEDMLRACVLEFSESWDSHLHLMEFAYNNS

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTTTGTATCACCTAGGTAAGGCAAACGTAGTAGCTGACGCGTTGAGTAGGAAGGTTGCGCA
TTCAGCAACGCTTATCACCAAGCAAGCTCCCTTACTAAGAGATCTCGAGAGAGCTGAGATTGCAGTCTCAGTAGGGGAAGTAACCTCACAGTTGGCTCAGTTGACCGTGC
AGCCAACCTTGAGACAGAGGATTATTGTTGCTCAGCTAAATGATCCTTATTTGGTCGAGAAGCATCTATTAGTAGAGGCAGGGCAAAGTCAGGATTTCTCCATATCCTCT
GATGACGGACTTACTTTCGATGGACGTTTGTGCGTGCCAGAAGACAGTGCAGTCAAGGTAGAGCTTTTGAATGAGGCTCACAGTTCTCCATTTTCTATGCACCCTAGAAG
TACGAAGATGTACCAAGACTTGAGGTGTGTCTATTGGTGGAGGAACATGAAGAGAGAAGTGGCAAACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACCTA
GACAGAGGCCAGCAGGGCTGTTGCAACCCTTGAGTGTGCCAGGATGGAAATGGGAGAGCGTGTCGATGGACTTCATTACAGGACTGCCCAAGACCCTAAAGGGCTATACA
GTCATTTGGGTTGTTGTCGACAGACTCACGAAGTCAGCCCACTTTATTCTAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGACGGAGATAGTGAG
ACTGCATGGAGTACCCGTATCCATCGTTTCAGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTAGCCTTGGCCACGAGGCTAGACTTCAGTACAA
CTTTTCATCCTCAGACTGACGGTCAAACAGAGAGGTTGAACCAGGTTTTGGAAGATATGCTGCGAGCCTGTGTTCTGGAGTTCTCAGAGAGTTGGGACTCTCACTTGCAC
TTGATGGAATTCGCCTATAATAACAGTTACCGGCTACCATCGGCATGGCACCATTCGAGGCTCTGTATGGTAAGTATTGTAGGTCTCCTGTTTGTTGGGGTGAGGTTAGT
GAGCAGAGAATGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTTTGTATCACCTAGGTAAGGCAAACGTAGTAGCTGACGCGTTGAGTAGGAAGGTTGCGCA
TTCAGCAACGCTTATCACCAAGCAAGCTCCCTTACTAAGAGATCTCGAGAGAGCTGAGATTGCAGTCTCAGTAGGGGAAGTAACCTCACAGTTGGCTCAGTTGACCGTGC
AGCCAACCTTGAGACAGAGGATTATTGTTGCTCAGCTAAATGATCCTTATTTGGTCGAGAAGCATCTATTAGTAGAGGCAGGGCAAAGTCAGGATTTCTCCATATCCTCT
GATGACGGACTTACTTTCGATGGACGTTTGTGCGTGCCAGAAGACAGTGCAGTCAAGGTAGAGCTTTTGAATGAGGCTCACAGTTCTCCATTTTCTATGCACCCTAGAAG
TACGAAGATGTACCAAGACTTGAGGTGTGTCTATTGGTGGAGGAACATGAAGAGAGAAGTGGCAAACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACCTA
GACAGAGGCCAGCAGGGCTGTTGCAACCCTTGAGTGTGCCAGGATGGAAATGGGAGAGCGTGTCGATGGACTTCATTACAGGACTGCCCAAGACCCTAAAGGGCTATACA
GTCATTTGGGTTGTTGTCGACAGACTCACGAAGTCAGCCCACTTTATTCTAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGACGGAGATAGTGAG
ACTGCATGGAGTACCCGTATCCATCGTTTCAGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTAGCCTTGGCCACGAGGCTAGACTTCAGTACAA
CTTTTCATCCTCAGACTGACGGTCAAACAGAGAGGTTGAACCAGGTTTTGGAAGATATGCTGCGAGCCTGTGTTCTGGAGTTCTCAGAGAGTTGGGACTCTCACTTGCAC
TTGATGGAATTCGCCTATAATAACAGTTACCGGCTACCATCGGCATGGCACCATTCGAGGCTCTGTATGGTAAGTATTGTAGGTCTCCTGTTTGTTGGGGTGAGGTTAGT
GAGCAGAGAATGCTAG
Protein sequenceShow/hide protein sequence
MRQRRWLELVKDYDCEILYHLGKANVVADALSRKVAHSATLITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRIIVAQLNDPYLVEKHLLVEAGQSQDFSISS
DDGLTFDGRLCVPEDSAVKVELLNEAHSSPFSMHPRSTKMYQDLRCVYWWRNMKREVANFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYT
VIWVVVDRLTKSAHFILGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALATRLDFSTTFHPQTDGQTERLNQVLEDMLRACVLEFSESWDSHLH
LMEFAYNNSYRLPSAWHHSRLCMVSIVGLLFVGVRLVSREC