; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0223431 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0223431
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr08:12909561..12910238
RNA-Seq ExpressionCmc08g0223431
SyntenyCmc08g0223431
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025815.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.2e-123100Show/hide
Query:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW
        MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW
Subjt:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW

Query:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI
        RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI
Subjt:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI

Query:  FTKALPSTRFNQLLTKLKLTATLPP
        FTKALPSTRFNQLLTKLKLTATLPP
Subjt:  FTKALPSTRFNQLLTKLKLTATLPP

KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.1e-10989.78Show/hide
Query:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW
        +SLYRQL G+LIYLTV RPDIAY VHIVSQFMAAPRT +FT VLRILRY+KGTLGH LQFSSQSSLVLSGYSDADWA DPTD+ STTGYCFYL DSLISW
Subjt:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW

Query:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI
        RSKKQ VVSRSSTESEYRALADA AELLWL WLLADMGVPQQGP LLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLL+S+STTEQPADI
Subjt:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI

Query:  FTKALPSTRFNQLLTKLKLTATLPP
        FTKALPSTRFNQ+ TKLKLTATLPP
Subjt:  FTKALPSTRFNQLLTKLKLTATLPP

KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.1e-10989.78Show/hide
Query:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW
        +SLYRQL G+LIYLTV RPDIAY VHIVSQFMAAPRT +FT VLRILRY+KGTLGH LQFSSQSSLVLSGYSDADWA DPTD+ STTGYCFYL DSLISW
Subjt:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW

Query:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI
        RSKKQ VVSRSSTESEYRALADA AELLWL WLLADMGVPQQGP LLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLL+S+STTEQPADI
Subjt:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI

Query:  FTKALPSTRFNQLLTKLKLTATLPP
        FTKALPSTRFNQ+ TKLKLTATLPP
Subjt:  FTKALPSTRFNQLLTKLKLTATLPP

KAA0057254.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.6e-10989.78Show/hide
Query:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW
        +SLYRQL G+LIYLTV RPDIAY VHIVSQFMAAPRT +FT VLRILRY+KGTLGH LQFSSQSSLVLSGYSDADWA DPTDQ STTGYCFYL DSLISW
Subjt:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW

Query:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI
        RSKKQ VVSRSSTESEYRALADA AELLWL WLLADMGVPQQGP LLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLL+S+STTEQPADI
Subjt:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI

Query:  FTKALPSTRFNQLLTKLKLTATLPP
        FTKALP TRFNQ+ TKLKLTATLPP
Subjt:  FTKALPSTRFNQLLTKLKLTATLPP

TYK04714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]6.2e-10989.33Show/hide
Query:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW
        +SLYRQL G+LIYLTV RPDIAY VHIVSQFMAAPRT +FT VLRILRY+KGTLGH LQFSSQSSLVLSGYSDADWA DPTD+ STTGYCFYL DSLISW
Subjt:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW

Query:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI
        RSKKQ VVSRSSTESEYRALADA AELLWL WLLADMGVPQQGP LLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLL+S+STTEQPADI
Subjt:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI

Query:  FTKALPSTRFNQLLTKLKLTATLPP
        FTKALPSTRFNQ+ TKLKLTA+LPP
Subjt:  FTKALPSTRFNQLLTKLKLTATLPP

TrEMBL top hitse value%identityAlignment
A0A5A7SMY1 Putative mitochondrial protein5.7e-124100Show/hide
Query:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW
        MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW
Subjt:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW

Query:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI
        RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI
Subjt:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI

Query:  FTKALPSTRFNQLLTKLKLTATLPP
        FTKALPSTRFNQLLTKLKLTATLPP
Subjt:  FTKALPSTRFNQLLTKLKLTATLPP

A0A5A7T8F2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.0e-10989.78Show/hide
Query:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW
        +SLYRQL G+LIYLTV RPDIAY VHIVSQFMAAPRT +FT VLRILRY+KGTLGH LQFSSQSSLVLSGYSDADWA DPTD+ STTGYCFYL DSLISW
Subjt:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW

Query:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI
        RSKKQ VVSRSSTESEYRALADA AELLWL WLLADMGVPQQGP LLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLL+S+STTEQPADI
Subjt:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI

Query:  FTKALPSTRFNQLLTKLKLTATLPP
        FTKALPSTRFNQ+ TKLKLTATLPP
Subjt:  FTKALPSTRFNQLLTKLKLTATLPP

A0A5A7UPX9 Retrovirus-related Pol polyprotein from transposon TNT 1-941.8e-10989.78Show/hide
Query:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW
        +SLYRQL G+LIYLTV RPDIAY VHIVSQFMAAPRT +FT VLRILRY+KGTLGH LQFSSQSSLVLSGYSDADWA DPTDQ STTGYCFYL DSLISW
Subjt:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW

Query:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI
        RSKKQ VVSRSSTESEYRALADA AELLWL WLLADMGVPQQGP LLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLL+S+STTEQPADI
Subjt:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI

Query:  FTKALPSTRFNQLLTKLKLTATLPP
        FTKALP TRFNQ+ TKLKLTATLPP
Subjt:  FTKALPSTRFNQLLTKLKLTATLPP

A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-941.0e-10989.78Show/hide
Query:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW
        +SLYRQL G+LIYLTV RPDIAY VHIVSQFMAAPRT +FT VLRILRY+KGTLGH LQFSSQSSLVLSGYSDADWA DPTD+ STTGYCFYL DSLISW
Subjt:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW

Query:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI
        RSKKQ VVSRSSTESEYRALADA AELLWL WLLADMGVPQQGP LLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLL+S+STTEQPADI
Subjt:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI

Query:  FTKALPSTRFNQLLTKLKLTATLPP
        FTKALPSTRFNQ+ TKLKLTATLPP
Subjt:  FTKALPSTRFNQLLTKLKLTATLPP

A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-943.0e-10989.33Show/hide
Query:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW
        +SLYRQL G+LIYLTV RPDIAY VHIVSQFMAAPRT +FT VLRILRY+KGTLGH LQFSSQSSLVLSGYSDADWA DPTD+ STTGYCFYL DSLISW
Subjt:  MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISW

Query:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI
        RSKKQ VVSRSSTESEYRALADA AELLWL WLLADMGVPQQGP LLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLL+S+STTEQPADI
Subjt:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI

Query:  FTKALPSTRFNQLLTKLKLTATLPP
        FTKALPSTRFNQ+ TKLKLTA+LPP
Subjt:  FTKALPSTRFNQLLTKLKLTATLPP

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.3e-3740.64Show/hide
Query:  RQLFGNLIYLTV-NRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSL--VLSGYSDADWARDPTDQCSTTGYCFYLRD-SLISW
        R L G L+Y+ +  RPD+   V+I+S++ +   +  +  + R+LRY+KGT+  +L F    +    + GY D+DWA    D+ STTGY F + D +LI W
Subjt:  RQLFGNLIYLTV-NRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSL--VLSGYSDADWARDPTDQCSTTGYCFYLRD-SLISW

Query:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI
         +K+Q  V+ SSTE+EY AL +A  E LWL +LL  + +  + PI ++ DN+  I IA+N   H+R KHI+   HF R  + +N + L  + T  Q ADI
Subjt:  RSKKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADI

Query:  FTKALPSTRFNQLLTKLKL
        FTK LP+ RF +L  KL L
Subjt:  FTKALPSTRFNQLLTKLKL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.5e-3640.38Show/hide
Query:  YRQLFGNLIYLTV-NRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISWRS
        Y    G+L+Y  V  RPDIA+ V +VS+F+  P   ++  V  ILRY++GT G  L F   S  +L GY+DAD A D  ++ S+TGY F      ISW+S
Subjt:  YRQLFGNLIYLTV-NRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISWRS

Query:  KKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADIFT
        K Q+ V+ S+TE+EY A  +   E++WL   L ++G+ Q+   +++CD++SAI ++ N ++H RTKHI+   H+IR  +   +L +  +ST E PAD+ T
Subjt:  KKQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADIFT

Query:  KALPSTRF
        K +P  +F
Subjt:  KALPSTRF

P92519 Uncharacterized mitochondrial protein AtMg008106.8e-2648.41Show/hide
Query:  YRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISWRSK
        +R + G L YLT+ RPDI+Y V+IV Q M  P    F  + R+LRY+KGT+ H L     S L +  + D+DWA   + + STTG+C +L  ++ISW +K
Subjt:  YRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISWRSK

Query:  KQRVVSRSSTESEYRALADANAELLW
        +Q  VSRSSTE+EYRALA   AEL W
Subjt:  KQRVVSRSSTESEYRALADANAELLW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.6e-4544.34Show/hide
Query:  YRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISWRSK
        YR + G+L YL   RPDI+Y V+ +SQFM  P   +   + RILRY+ GT  H +     ++L L  YSDADWA D  D  ST GY  YL    ISW SK
Subjt:  YRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISWRSK

Query:  KQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADIFTK
        KQ+ V RSSTE+EYR++A+ ++E+ W+  LL ++G+    P +++CDN  A  +  N VFH R KHI  D HFIR+ + S  L +  VST +Q AD  TK
Subjt:  KQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADIFTK

Query:  ALPSTRFNQLLTKLKLTATLP
         L  T F    +K+ +T   P
Subjt:  ALPSTRFNQLLTKLKLTATLP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.7e-4342.53Show/hide
Query:  YRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISWRSK
        YR + G+L YL   RPD++Y V+ +SQ+M  P   ++  + R+LRY+ GT  H +     ++L L  YSDADWA D  D  ST GY  YL    ISW SK
Subjt:  YRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISWRSK

Query:  KQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADIFTK
        KQ+ V RSSTE+EYR++A+ ++EL W+  LL ++G+    P +++CDN  A  +  N VFH R KHI  D HFIR+ + S  L +  VST +Q AD  TK
Subjt:  KQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADIFTK

Query:  ALPSTRFNQLLTKLKLTATLP
         L    F     K+ +    P
Subjt:  ALPSTRFNQLLTKLKLTATLP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.4e-4547.52Show/hide
Query:  YRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISWRSK
        YR+L G L+YL + R DI++ V+ +SQF  APR  +   V++IL YIKGT+G  L +SSQ+ + L  +SDA +      + ST GYC +L  SLISW+SK
Subjt:  YRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISWRSK

Query:  KQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADIFTK
        KQ+VVS+SS E+EYRAL+ A  E++WL     ++ +P   P LL CDN +AI IA N VFHERTKHIE+DCH +R   +    L  S    ++  D FT+
Subjt:  KQRVVSRSSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADIFTK

Query:  AL
         L
Subjt:  AL

ATMG00240.1 Gag-Pol-related retrotransposon family protein2.8e-1443.04Show/hide
Query:  IYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYC
        +YLT+ RPD+ + V+ +SQF +A RT     V ++L Y+KGT+G  L +S+ S L L  ++D+DWA  P  + S TG+C
Subjt:  IYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein4.9e-2748.41Show/hide
Query:  YRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISWRSK
        +R + G L YLT+ RPDI+Y V+IV Q M  P    F  + R+LRY+KGT+ H L     S L +  + D+DWA   + + STTG+C +L  ++ISW +K
Subjt:  YRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISWRSK

Query:  KQRVVSRSSTESEYRALADANAELLW
        +Q  VSRSSTE+EYRALA   AEL W
Subjt:  KQRVVSRSSTESEYRALADANAELLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTATATCGACAACTTTTTGGCAATCTCATCTATCTAACAGTGAATCGTCCAGACATTGCATATGTTGTTCATATTGTCAGTCAGTTTATGGCTGCTCCTAGAAC
CACTTATTTTACCACCGTGTTACGTATTCTTCGCTATATCAAGGGAACCTTGGGGCATGAACTTCAGTTTTCTTCTCAATCCTCCCTCGTGTTGTCTGGCTACTCTGATG
CAGATTGGGCTAGGGACCCTACCGATCAATGTTCTACAACAGGTTACTGTTTCTATTTAAGAGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGAGTTGTCTCTCGT
TCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATGCTAACGCTGAACTCCTATGGCTTCATTGGCTTCTTGCTGATATGGGGGTTCCCCAGCAGGGTCCCATCCTCCT
TCATTGTGACAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGACTGTCACTTCATTCGTCATCATCTCTTGAGCA
ACACACTTCTTCTGCGATCTGTCTCCACCACTGAGCAACCAGCAGATATCTTTACCAAAGCTTTACCATCTACCCGCTTCAATCAGTTACTTACCAAACTCAAGCTGACA
GCTACTCTACCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTATATCGACAACTTTTTGGCAATCTCATCTATCTAACAGTGAATCGTCCAGACATTGCATATGTTGTTCATATTGTCAGTCAGTTTATGGCTGCTCCTAGAAC
CACTTATTTTACCACCGTGTTACGTATTCTTCGCTATATCAAGGGAACCTTGGGGCATGAACTTCAGTTTTCTTCTCAATCCTCCCTCGTGTTGTCTGGCTACTCTGATG
CAGATTGGGCTAGGGACCCTACCGATCAATGTTCTACAACAGGTTACTGTTTCTATTTAAGAGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGAGTTGTCTCTCGT
TCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATGCTAACGCTGAACTCCTATGGCTTCATTGGCTTCTTGCTGATATGGGGGTTCCCCAGCAGGGTCCCATCCTCCT
TCATTGTGACAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGACTGTCACTTCATTCGTCATCATCTCTTGAGCA
ACACACTTCTTCTGCGATCTGTCTCCACCACTGAGCAACCAGCAGATATCTTTACCAAAGCTTTACCATCTACCCGCTTCAATCAGTTACTTACCAAACTCAAGCTGACA
GCTACTCTACCACCTTGA
Protein sequenceShow/hide protein sequence
MSLYRQLFGNLIYLTVNRPDIAYVVHIVSQFMAAPRTTYFTTVLRILRYIKGTLGHELQFSSQSSLVLSGYSDADWARDPTDQCSTTGYCFYLRDSLISWRSKKQRVVSR
SSTESEYRALADANAELLWLHWLLADMGVPQQGPILLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLRSVSTTEQPADIFTKALPSTRFNQLLTKLKLT
ATLPP