CuGenDBv2

Gene ID	Cmc08g0223761
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr08:13342489..13344964
RNA-Seq Expression	Cmc08g0223761
Synteny	Cmc08g0223761
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.14

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        MRLCIDYRELNKVTVKNRYPLP+IDDLFDQL GATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GS SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQ NDPYLVEKR LAEAGQAVEFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNE IQKIRSRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPMRGVLRFERRGKLSPRFV PFEILE IGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0037901.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.02

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        MRLCIDYRELNKVTVKN+YPLP+IDDLFDQL GATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIV+SFGLTNAPAVFMDLMNRVFREFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDN+LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRP+TVSEVRSFLGLAGYYRR VENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GS SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA KIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS  LITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCV SDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT RLNQVLEDMLRACALEFPGSWDSHLHLMEFA NNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNE IQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILE IGP+AYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.89

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        MRLCIDYRELNKVTVKNRYPLP+IDDLFDQL GATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GS SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNE IQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRF+GPFEILE IGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.39

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        MRLCIDYRELNKVTVKNRYPLP+IDDLFDQL GATVFSKIDLRSGY+QLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GS SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNE IQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRFERRGKLSPRFVGPFEILE IGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.39

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        MRLCIDYRELNKVTVKNRYPLP+IDDLFDQL GATVFSKIDLRSG HQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
         ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GS SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTL+GFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNE IQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPFEILE IGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

97.14

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        MRLCIDYRELNKVTVKNRYPLP+IDDLFDQL GATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GS SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQ NDPYLVEKR LAEAGQAVEFSLSSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYGKCCRSPVCWGEVGEQ LM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNE IQKIRSRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPMRGVLRFERRGKLSPRFV PFEILE IGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7T8G8 Reverse transcriptase

0.0e+00

97.02

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        MRLCIDYRELNKVTVKN+YPLP+IDDLFDQL GATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIV+SFGLTNAPAVFMDLMNRVFREFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDN+LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRP+TVSEVRSFLGLAGYYRR VENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GS SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA KIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
         HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS  LITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCV SDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT RLNQVLEDMLRACALEFPGSWDSHLHLMEFA NNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNE IQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILE IGP+AYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7U330 Reverse transcriptase

0.0e+00

97.89

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        MRLCIDYRELNKVTVKNRYPLP+IDDLFDQL GATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GS SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNE IQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRF+GPFEILE IGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7UAA8 Reverse transcriptase

0.0e+00

97.39

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        MRLCIDYRELNKVTVKNRYPLP+IDDLFDQL GATVFSKIDLRSGY+QLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
        IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GS SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNE IQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRFERRGKLSPRFVGPFEILE IGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

A0A5A7UP94 Pol protein

0.0e+00

97.39

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        MRLCIDYRELNKVTVKNRYPLP+IDDLFDQL GATVFSKIDLRSG HQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLD FV
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
         ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GS SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW

Query:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
        RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT
Subjt:  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLT

Query:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS
        VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS
Subjt:  VQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS

Query:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR
        +CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTL+GFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDAR
Subjt:  RCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR

Query:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM
        FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLM
Subjt:  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLM

Query:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV
        GPELVQSTNE IQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPFEILE IGPVAYRLALPPSLSTVHDVFHV
Subjt:  GPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLALPPSLSTVHDVFHV

Query:  SMLRK
        SMLRK
Subjt:  SMLRK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

7.2e-134

33.7

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        +R+ +DY+ LNK    N YPLP I+ L  ++ G+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   + S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQRLMGPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLAL
        +   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L+  GP  Y L L
Subjt:  VCWGEVGEQRLMGPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRK
        P S+  +    FHVS L K
Subjt:  PPSLSTV-HDVFHVSMLRK

P0CT35 Transposon Tf2-2 polyprotein

7.2e-134

33.7

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        +R+ +DY+ LNK    N YPLP I+ L  ++ G+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   + S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQRLMGPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLAL
        +   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L+  GP  Y L L
Subjt:  VCWGEVGEQRLMGPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRK
        P S+  +    FHVS L K
Subjt:  PPSLSTV-HDVFHVSMLRK

P0CT36 Transposon Tf2-3 polyprotein

7.2e-134

33.7

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        +R+ +DY+ LNK    N YPLP I+ L  ++ G+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   + S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQRLMGPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLAL
        +   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L+  GP  Y L L
Subjt:  VCWGEVGEQRLMGPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRK
        P S+  +    FHVS L K
Subjt:  PPSLSTV-HDVFHVSMLRK

P0CT37 Transposon Tf2-4 polyprotein

7.2e-134

33.7

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        +R+ +DY+ LNK    N YPLP I+ L  ++ G+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   + S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQRLMGPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLAL
        +   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L+  GP  Y L L
Subjt:  VCWGEVGEQRLMGPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRK
        P S+  +    FHVS L K
Subjt:  PPSLSTV-HDVFHVSMLRK

P0CT41 Transposon Tf2-12 polyprotein

7.2e-134

33.7

Show/hide

Query:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV
        +R+ +DY+ LNK    N YPLP I+ L  ++ G+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V
Subjt:  MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFV

Query:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR
        + ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S+
Subjt:  IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR

Query:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF
        +  PL  L +K   + W+     + +N+KQ LV+ PVL   + S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Subjt:  IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF

Query:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGA
        +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I      
Subjt:  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGA

Query:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR
            + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+
Subjt:  VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR

Query:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV
         +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Subjt:  NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV

Query:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP
        P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP
Subjt:  PVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSP

Query:  VCWGEVGEQRLMGPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLAL
        +   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L+  GP  Y L L
Subjt:  VCWGEVGEQRLMGPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILEWIGPVAYRLAL

Query:  PPSLSTV-HDVFHVSMLRK
        P S+  +    FHVS L K
Subjt:  PPSLSTV-HDVFHVSMLRK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.5e-27

45.04

Show/hide

Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPEGSSSFV
        ++    +F+ LK  + T PVL +P+    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPEGSSSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAAGATCGACGATCTATTTGACCAGTTACATGGAGCCACAGTGTT
CTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACAGCATTTCGATCCAGGTATGGACACTACGAGTTTATTGTGATGT
CTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATAATTTTGTGATTGTGTTTATCGACGATATCTTGATATAC
TCCAAGACGGAGGCCGAACATGAAGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAGTGCGAGTTTTGGCTGAAGCAGGT
GTCCTTTCTGGGCCACGTGGTTTCTAAGGCCGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCT
TTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAAAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCA
TGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGAGGGTTCTAGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGG
TTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGG
TTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGA
CAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTATCACATTCGAC
AGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGA
CTTTGAGGCAAAGGATCATTGATGCTCAGAGTAATGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCGCTATCCTCTGATGGT
GGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACAAA
GATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGA
AACCAGCGGGCTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGGCTGCCGAGAACTCTGAAGGGTTTTACAGTGATT
TGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTGCA
TGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCC
ATCCACAGACTGATGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGACATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATG
GAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGCGAGCA
GAGATTGATGGGTCCTGAGTTAGTTCAGTCCACTAACGAAACGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAAAAGAGTTATGCAGATGTGAGGC
GGAAGGATCTTGAGTTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGG
CCGTTTGAGATTCTGGAGTGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCCCCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAATTGAT
GAAAACTTGA

mRNA sequence

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Protein sequence

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MRLCIDYRELNKVTVKNRYPLPKIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDNFVIVFIDDILIY
SKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA
CEDSFQNLKQKLVTAPVLTVPEGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR
QRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDG
GLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVI
WVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLM
EFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNETIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG
PFEILEWIGPVAYRLALPPSLSTVHDVFHVSMLRKLMKT

Cmc08g0223761 (gene) of Melon (Charmono) v1.1 genome