; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0223881 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0223881
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr08:13522109..13522495
RNA-Seq ExpressionCmc08g0223881
SyntenyCmc08g0223881
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0032456 - endocytic recycling (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005768 - endosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025138.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.6e-5691.41Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        MEVARSKEGISVSQRK TLDLLTETGMLGC  ADTPIEF  KLGNSDDQVPV KEQYQRLVGKLIYLSHT PDISF VSAVSQFMQAPYE+HMEAVKRIL
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD
        RYLKTTPGKGLMF+KTDKKTI AYTDSD
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD

KAA0045027.1 Beta-galactosidase [Cucumis melo var. makuwa]5.4e-5792.19Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        MEVARSKEGISVSQRK TLDLLTETGMLGC  ADTPIEF  KLGNS+DQVPV KEQYQRLVGKLIYLSHT PDISF VSAVSQFMQAPYEKHMEAVKRIL
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD
        RYLKTTPGKGLMFKKTDKKTI AYTDSD
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD

KAA0067540.1 Beta-galactosidase [Cucumis melo var. makuwa]2.7e-5689.06Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        MEVARSKEGISVSQRK TLDLLTETGMLGCHPADTPIEF  KLGNSDDQVPV KEQY RLVGKLIYLSHT PDISF VS VSQFMQAPYEKHMEAV RIL
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD
        RYLK TPGKGLMF+KT++KTI AYTDSD
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]5.9e-5689.06Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        MEVARSKEGISVSQRK TLDLLTETGMLGC PADTPIEF  KLGNSDDQVPV KEQYQRLVGKLIYLSHT PDISF VS VSQFMQAPYEKHMEAV RIL
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD
        RYLK TPGKGLMF+KT++KTI AYTDSD
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD

TYK23097.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.6e-5691.41Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        MEVARSKEGISVSQRK TLDLLTETGMLGC  ADTPIEF  KLGNSDDQVPV KEQYQRLVGKLIYLSHT PDISF VSAVSQFMQAPYE+HMEAVKRIL
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD
        RYLKTTPGKGLMF+KTDKKTI AYTDSD
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD

TrEMBL top hitse value%identityAlignment
A0A5A7SG80 Retrovirus-related Pol polyprotein from transposon TNT 1-947.6e-5791.41Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        MEVARSKEGISVSQRK TLDLLTETGMLGC  ADTPIEF  KLGNSDDQVPV KEQYQRLVGKLIYLSHT PDISF VSAVSQFMQAPYE+HMEAVKRIL
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD
        RYLKTTPGKGLMF+KTDKKTI AYTDSD
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD

A0A5A7VK49 Beta-galactosidase1.3e-5689.06Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        MEVARSKEGISVSQRK TLDLLTETGMLGCHPADTPIEF  KLGNSDDQVPV KEQY RLVGKLIYLSHT PDISF VS VSQFMQAPYEKHMEAV RIL
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD
        RYLK TPGKGLMF+KT++KTI AYTDSD
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD

A0A5D3BBC2 Beta-galactosidase2.6e-5792.19Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        MEVARSKEGISVSQRK TLDLLTETGMLGC  ADTPIEF  KLGNS+DQVPV KEQYQRLVGKLIYLSHT PDISF VSAVSQFMQAPYEKHMEAVKRIL
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD
        RYLKTTPGKGLMFKKTDKKTI AYTDSD
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD

A0A5D3BJK7 Beta-galactosidase2.9e-5689.06Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        MEVARSKEGISVSQRK TLDLLTETGMLGC PADTPIEF  KLGNSDDQVPV KEQYQRLVGKLIYLSHT PDISF VS VSQFMQAPYEKHMEAV RIL
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD
        RYLK TPGKGLMF+KT++KTI AYTDSD
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD

A0A5D3DHC0 Retrovirus-related Pol polyprotein from transposon TNT 1-947.6e-5791.41Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        MEVARSKEGISVSQRK TLDLLTETGMLGC  ADTPIEF  KLGNSDDQVPV KEQYQRLVGKLIYLSHT PDISF VSAVSQFMQAPYE+HMEAVKRIL
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD
        RYLKTTPGKGLMF+KTDKKTI AYTDSD
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.0e-1034.35Show/hide
Query:  RSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNS------DDQVPVGKEQYQRLVGKLIY-LSHTCPDISFVVSAVSQFMQAPYEKHMEAVK
        R+   + +SQ K    +L    M    P  TP+    KL         +++  + K  Y   VG L+Y +  T PDI+  V  VS+F++ P ++H EAVK
Subjt:  RSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNS------DDQVPVGKEQYQRLVGKLIY-LSHTCPDISFVVSAVSQFMQAPYEKHMEAVK

Query:  RILRYLKTTPGKGLMFKKTDKKTIVAYTDSD
         ILRYL+ T G  L F  +D   +  YTD+D
Subjt:  RILRYLKTTPGKGLMFKKTDKKTIVAYTDSD

P25600 Putative transposon Ty5-1 protein YCL074W1.8e-0737.5Show/hide
Query:  YQRLVGKLIYLSHT-CPDISFVVSAVSQFMQAPYEKHMEAVKRILRYLKTTPGKGLMFKKTDKKTIVAYTDS
        YQ +VG+L++ ++T  PDIS+ VS +S+F++ P   H+E+ +R+LRYL TT    L ++   +  +  Y D+
Subjt:  YQRLVGKLIYLSHT-CPDISFVVSAVSQFMQAPYEKHMEAVKRILRYLKTTPGKGLMFKKTDKKTIVAYTDS

P92519 Uncharacterized mitochondrial protein AtMg008103.4e-1435.16Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        +++     G+ +SQ K    +L   GML C P  TP+  K     S  + P     ++ +VG L YL+ T PDIS+ V+ V Q M  P     + +KR+L
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD
        RY+K T   GL   K  K  + A+ DSD
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.8e-2141.41Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        +E  R   G+ +SQR+  LDLL  T M+   P  TP+    KL            +Y+ +VG L YL+ T PDIS+ V+ +SQFM  P E+H++A+KRIL
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD
        RYL  TP  G+  KK +  ++ AY+D+D
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.4e-2041.09Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLG-NSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRI
        +E  R  +G+ +SQR+ TLDLL  T ML   P  TP+    KL  +S  ++P    +Y+ +VG L YL+ T PD+S+ V+ +SQ+M  P + H  A+KR+
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLG-NSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRI

Query:  LRYLKTTPGKGLMFKKTDKKTIVAYTDSD
        LRYL  TP  G+  KK +  ++ AY+D+D
Subjt:  LRYLKTTPGKGLMFKKTDKKTIVAYTDSD

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 89.2e-2340.94Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        +E+ARS  GI++ QRK  LDLL ETG+LGC P+  P++             V  + Y+RL+G+L+YL  T  DISF V+ +SQF +AP   H +AV +IL
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDS
         Y+K T G+GL +    +  +  ++D+
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDS

ATMG00240.1 Gag-Pol-related retrotransposon family protein6.4e-0840.62Show/hide
Query:  IYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRILRYLKTTPGKGLMFKKTDKKTIVAYTDSD
        +YL+ T PD++F V+ +SQF  A     M+AV ++L Y+K T G+GL +  T    + A+ DSD
Subjt:  IYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRILRYLKTTPGKGLMFKKTDKKTIVAYTDSD

ATMG00810.1 DNA/RNA polymerases superfamily protein2.4e-1535.16Show/hide
Query:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL
        +++     G+ +SQ K    +L   GML C P  TP+  K     S  + P     ++ +VG L YL+ T PDIS+ V+ V Q M  P     + +KR+L
Subjt:  MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRIL

Query:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD
        RY+K T   GL   K  K  + A+ DSD
Subjt:  RYLKTTPGKGLMFKKTDKKTIVAYTDSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTGGCCAGATCTAAAGAAGGCATCTCCGTGTCTCAGAGAAAATGCACCCTTGATCTGCTAACCGAGACAGGTATGTTGGGATGTCATCCCGCTGACACTCCTAT
TGAATTCAAACGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGGTAAGGAACAATATCAGCGCCTTGTGGGTAAATTGATTTACTTATCTCATACTTGTCCTGATA
TTTCCTTTGTTGTTAGTGCTGTCAGCCAGTTTATGCAAGCTCCCTATGAGAAACACATGGAAGCTGTCAAAAGAATTCTGAGATACTTAAAAACGACACCTGGCAAAGGG
TTGATGTTTAAAAAGACAGACAAAAAGACCATCGTGGCATATACTGACTCGGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTGGCCAGATCTAAAGAAGGCATCTCCGTGTCTCAGAGAAAATGCACCCTTGATCTGCTAACCGAGACAGGTATGTTGGGATGTCATCCCGCTGACACTCCTAT
TGAATTCAAACGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGGTAAGGAACAATATCAGCGCCTTGTGGGTAAATTGATTTACTTATCTCATACTTGTCCTGATA
TTTCCTTTGTTGTTAGTGCTGTCAGCCAGTTTATGCAAGCTCCCTATGAGAAACACATGGAAGCTGTCAAAAGAATTCTGAGATACTTAAAAACGACACCTGGCAAAGGG
TTGATGTTTAAAAAGACAGACAAAAAGACCATCGTGGCATATACTGACTCGGATTAG
Protein sequenceShow/hide protein sequence
MEVARSKEGISVSQRKCTLDLLTETGMLGCHPADTPIEFKRKLGNSDDQVPVGKEQYQRLVGKLIYLSHTCPDISFVVSAVSQFMQAPYEKHMEAVKRILRYLKTTPGKG
LMFKKTDKKTIVAYTDSD