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Cmc08g0223921 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0223921
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationCMiso1.1chr08:13544450..13544884
RNA-Seq ExpressionCmc08g0223921
SyntenyCmc08g0223921
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022899321.1 uncharacterized protein LOC111412620 [Olea europaea var. sylvestris]2.7e-4158.74Show/hide
Query:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ
        +SQR+Y LQ+LEDT FL +KP   PMDP LKLS   G+L+   D + YR+L GR +YL ISRPDI F VH+LSQF+  P +  L+ AHHLL+Y+K SPGQ
Subjt:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ

Query:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
        GIL S  +S  L+AF D DWGSCLDTR+S+  F +FLG+S+IS
Subjt:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

XP_031744313.1 uncharacterized protein LOC116404977 [Cucumis sativus]2.3e-5676.39Show/hide
Query:  MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPG
        M+SQRKYCLQILEDT FL++KPV+ PMDPNLKL K+ GE L E+D T YRRLIGR IYLQISRPDICF VHRLSQF+  PTK  L+ AHHLLKYLK S G
Subjt:  MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPG

Query:  QGILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
        QG+LI PI SFHLKAFV  DWGSCLDTRRS+T F IFLG+SIIS
Subjt:  QGILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

XP_031745923.1 uncharacterized protein LOC116406346 [Cucumis sativus]1.2e-5777.08Show/hide
Query:  MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPG
        M+SQRKYCLQILEDT FL++K V+ PMDPNLKL K+ GE L E+D T YRRLIGR IYLQISRPDICF VHRLSQF+  PTK  L+ AHHLLKYLK SPG
Subjt:  MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPG

Query:  QGILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
        QG+LI PI SFHLKAFVD DWGSCLDTRRS+T F IFLG+SIIS
Subjt:  QGILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

XP_038879273.1 uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida]2.8e-6286.11Show/hide
Query:  MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPG
        MISQRKYCLQILEDT FLEAKP  TPMDPNLKLSKN GELLK DDIT YRRLIGR IYLQISRPDICFVVHRLSQFI SPTK  LN AHHLL+YLK  PG
Subjt:  MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPG

Query:  QGILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
        QGILISPITSFHLKAFVD DWGSC  TRRSIT F IFLG SIIS
Subjt:  QGILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

XP_038896371.1 uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida]2.4e-6184.03Show/hide
Query:  MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPG
        MISQRKYCLQILEDT FLEAKPV TPMDPNLKLSKN GE LK DDIT YRRLI R IYLQIS+PDICF +HRLSQFI SPTK  LN AHHLL+YLK SPG
Subjt:  MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPG

Query:  QGILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
        QGILISPITSFHLKAFVD DWGSC DTRRSIT F IFLG  IIS
Subjt:  QGILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

TrEMBL top hitse value%identityAlignment
A0A5D3DVP4 Putative mitochondrial protein1.8e-3855.24Show/hide
Query:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ
        +SQRKYCLQILED+ FL AKP   PM P+L+LS   G  L ++D + YRRLIGR +YLQISRPD+ + VH+LSQF+  P  + L   HHLL+YLK +  Q
Subjt:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ

Query:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
        GI++     F++K FVD DW  CLDT++SIT F IFL +S++S
Subjt:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

A0A6J1DNK9 uncharacterized protein LOC111022877 isoform X15.5e-4058.04Show/hide
Query:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ
        +SQR Y LQ++EDT FL  KP   PMDPN+KLS + G+LL  DD + YRRLIGR +YL ISRPDI F VH+LSQF+ +P    L   H L++YLK  PGQ
Subjt:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ

Query:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
         IL++P  SF L+AF D DWGSC D+R+S T F IFLG+S++S
Subjt:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

A0A6J1DP23 uncharacterized protein LOC111022877 isoform X45.5e-4058.04Show/hide
Query:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ
        +SQR Y LQ++EDT FL  KP   PMDPN+KLS + G+LL  DD + YRRLIGR +YL ISRPDI F VH+LSQF+ +P    L   H L++YLK  PGQ
Subjt:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ

Query:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
         IL++P  SF L+AF D DWGSC D+R+S T F IFLG+S++S
Subjt:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

A0A6J1DQI6 uncharacterized protein LOC111022877 isoform X35.5e-4058.04Show/hide
Query:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ
        +SQR Y LQ++EDT FL  KP   PMDPN+KLS + G+LL  DD + YRRLIGR +YL ISRPDI F VH+LSQF+ +P    L   H L++YLK  PGQ
Subjt:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ

Query:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
         IL++P  SF L+AF D DWGSC D+R+S T F IFLG+S++S
Subjt:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

A0A6J1DSZ9 uncharacterized protein LOC111022877 isoform X25.5e-4058.04Show/hide
Query:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ
        +SQR Y LQ++EDT FL  KP   PMDPN+KLS + G+LL  DD + YRRLIGR +YL ISRPDI F VH+LSQF+ +P    L   H L++YLK  PGQ
Subjt:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ

Query:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
         IL++P  SF L+AF D DWGSC D+R+S T F IFLG+S++S
Subjt:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.2e-1130.61Show/hide
Query:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITY----YRRLIGRFIYLQI-SRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLK
        +SQ KY  ++LE      AKPV TP+  +LKLSK       E+        Y   +G  +Y  + +RPDI   V  +S+F+++P K+       +L+YL+
Subjt:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITY----YRRLIGRFIYLQI-SRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLK

Query:  MSPGQGILISPITSFHLKAFVDTDWGSCLDTRRSITSF-YIFLGESI
         + G  +         LK + D D    +D R+S T + + F G +I
Subjt:  MSPGQGILISPITSFHLKAFVDTDWGSCLDTRRSITSF-YIFLGESI

P92519 Uncharacterized mitochondrial protein AtMg008101.0e-1936.36Show/hide
Query:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ
        +SQ KY  QIL +   L+ KP+ TP+   L  S +     K  D + +R ++G   YL ++RPDI + V+ + Q +  PT  D ++   +L+Y+K +   
Subjt:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ

Query:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
        G+ I   +  +++AF D+DW  C  TRRS T F  FLG +IIS
Subjt:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

P93290 Uncharacterized mitochondrial protein AtMg002401.3e-1446.15Show/hide
Query:  IYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDWGSCLDTRRSITSF
        +YL I+RPD+ F V+RLSQF  +     +   + +L Y+K + GQG+  S  +   LKAF D+DW SC DTRRS+T F
Subjt:  IYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDWGSCLDTRRSITSF

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.5e-2339.86Show/hide
Query:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ
        +SQR+Y L +L  T  + AKPV TPM P+ KLS   G   K  D T YR ++G   YL  +RPDI + V+RLSQF+  PT++ L     +L+YL  +P  
Subjt:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ

Query:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
        GI +    +  L A+ D DW    D   S   + ++LG   IS
Subjt:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.5e-2238.46Show/hide
Query:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ
        +SQR+Y L +L  T  L AKPV TPM  + KL+ + G   K  D T YR ++G   YL  +RPD+ + V+RLSQ++  PT D  N    +L+YL  +P  
Subjt:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ

Query:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
        GI +    +  L A+ D DW    D   S   + ++LG   IS
Subjt:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.2e-2643.75Show/hide
Query:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLS-KNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPG
        I QRKY L +L++T  L  KP   PMDP++  S  +GG+ +   D   YRRLIGR +YLQI+R DI F V++LSQF ++P          +L Y+K + G
Subjt:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLS-KNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPG

Query:  QGILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
        QG+  S      L+ F D  + SC DTRRS   + +FLG S+IS
Subjt:  QGILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

ATMG00240.1 Gag-Pol-related retrotransposon family protein9.4e-1646.15Show/hide
Query:  IYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDWGSCLDTRRSITSF
        +YL I+RPD+ F V+RLSQF  +     +   + +L Y+K + GQG+  S  +   LKAF D+DW SC DTRRS+T F
Subjt:  IYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDWGSCLDTRRSITSF

ATMG00810.1 DNA/RNA polymerases superfamily protein7.4e-2136.36Show/hide
Query:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ
        +SQ KY  QIL +   L+ KP+ TP+   L  S +     K  D + +R ++G   YL ++RPDI + V+ + Q +  PT  D ++   +L+Y+K +   
Subjt:  ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQ

Query:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS
        G+ I   +  +++AF D+DW  C  TRRS T F  FLG +IIS
Subjt:  GILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCCCAAAGAAAATATTGCCTTCAAATACTTGAAGATACTAGATTTCTTGAAGCTAAACCAGTTATAACTCCTATGGATCCCAATTTAAAACTATCAAAGAATGG
AGGAGAACTTCTAAAGGAAGATGATATCACTTATTATAGAAGATTAATTGGTAGGTTTATATATTTACAAATATCTCGGCCAGACATATGCTTCGTTGTTCATCGGCTAA
GCCAATTCATCCAAAGTCCAACTAAAGATGACTTAAATGTCGCTCATCACTTACTAAAGTACCTAAAAATGTCTCCTGGACAAGGCATTCTAATTAGTCCTATCACTTCC
TTTCACTTAAAAGCTTTTGTGGATACTGATTGGGGGTCATGTCTTGACACGAGAAGGTCCATTACGAGTTTCTACATATTCCTAGGGGAATCTATCATATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCCCAAAGAAAATATTGCCTTCAAATACTTGAAGATACTAGATTTCTTGAAGCTAAACCAGTTATAACTCCTATGGATCCCAATTTAAAACTATCAAAGAATGG
AGGAGAACTTCTAAAGGAAGATGATATCACTTATTATAGAAGATTAATTGGTAGGTTTATATATTTACAAATATCTCGGCCAGACATATGCTTCGTTGTTCATCGGCTAA
GCCAATTCATCCAAAGTCCAACTAAAGATGACTTAAATGTCGCTCATCACTTACTAAAGTACCTAAAAATGTCTCCTGGACAAGGCATTCTAATTAGTCCTATCACTTCC
TTTCACTTAAAAGCTTTTGTGGATACTGATTGGGGGTCATGTCTTGACACGAGAAGGTCCATTACGAGTTTCTACATATTCCTAGGGGAATCTATCATATCATGA
Protein sequenceShow/hide protein sequence
MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITS
FHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS