| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.3e-71 | 83.85 | Show/hide |
Query: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
MLK IRILLSI TFY+YEIWQMDVKTAFLNGNLEESIYM QPEGFI + QEQK+CKLQKSIYGLKQASRSWNI+FDT IKSY FEQNVDEPCVYKK+V+S
Subjt: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
Query: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
+VAFL+LY+DDILLIGNDV YLT++KKWL QFQMKDLG+AQY+LGIQIVRN KN+TLA+S
Subjt: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-70 | 83.23 | Show/hide |
Query: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
M+K IRILLSI TFYDYEIWQMDVKTAFLNGNLEESIYM QPEGFI+KGQEQK+CKLQKSIYGLKQASRSWNI+FDT IKSY FEQNVDEPCVYK++++S
Subjt: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
Query: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
VAFLVLY+DDILLIGN+V +LT+IK+WL QFQMKDLG AQYVLGIQIV+N KN+TLA+S
Subjt: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
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| KAA0061927.1 gag/pol protein [Cucumis melo var. makuwa] | 3.3e-72 | 86.96 | Show/hide |
Query: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
MLK IRILLSI TFYDYEIWQMDVKTAFLNGNLE S+YMAQP+GFIK GQEQK+CKLQKSIY LKQASRSWNIKFDT IK+Y FEQNV+EPCVYKKVV+S
Subjt: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
Query: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
IVAFLVLY+DDILLIGNDVGYLT+I+KWLA QFQMK LGDAQYVLGIQIVRN KNRTL +S
Subjt: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
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| TYK09500.1 gag/pol protein [Cucumis melo var. makuwa] | 8.5e-76 | 90.06 | Show/hide |
Query: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
MLK IRILLSI TFYDYEIWQ+DVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICK QKSIYGLKQASRSWNI+FDT IKSY FEQNVD+PCVYKKVV+S
Subjt: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
Query: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
IVAFLVLY+DDILL+GNDVGYLT+IKKWLA QFQMKD GDAQYVLGIQIVRN KNRTLA+S
Subjt: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
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| TYK24002.1 gag/pol protein [Cucumis melo var. makuwa] | 8.2e-71 | 86.34 | Show/hide |
Query: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
MLK IRILLSI TFYDYEIWQMDVKTAFLNGNLE S+YMAQP+GFIK GQEQK+CKLQKSIY LKQASRSWNIKFDT IK+Y FEQNV+EP VYKKVV+S
Subjt: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
Query: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
IVAFLVLY+DDILLIGNDVGYLT+I+KWLA QFQMK LGDAQYVLGIQIVRN KNRTL +S
Subjt: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 5.2e-71 | 83.23 | Show/hide |
Query: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
M+K IRILLSI TFYDYEIWQMDVKTAFLNGNLEESIYM QPEGFI+KGQEQK+CKLQKSIYGLKQASRSWNI+FDT IKSY FEQNVDEPCVYK++++S
Subjt: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
Query: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
VAFLVLY+DDILLIGN+V +LT+IK+WL QFQMKDLG AQYVLGIQIV+N KN+TLA+S
Subjt: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
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| A0A5A7V4T1 Gag/pol protein | 1.6e-72 | 86.96 | Show/hide |
Query: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
MLK IRILLSI TFYDYEIWQMDVKTAFLNGNLE S+YMAQP+GFIK GQEQK+CKLQKSIY LKQASRSWNIKFDT IK+Y FEQNV+EPCVYKKVV+S
Subjt: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
Query: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
IVAFLVLY+DDILLIGNDVGYLT+I+KWLA QFQMK LGDAQYVLGIQIVRN KNRTL +S
Subjt: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
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| A0A5D3CDT9 Gag/pol protein | 4.1e-76 | 90.06 | Show/hide |
Query: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
MLK IRILLSI TFYDYEIWQ+DVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICK QKSIYGLKQASRSWNI+FDT IKSY FEQNVD+PCVYKKVV+S
Subjt: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
Query: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
IVAFLVLY+DDILL+GNDVGYLT+IKKWLA QFQMKD GDAQYVLGIQIVRN KNRTLA+S
Subjt: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
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| A0A5D3DKH2 Gag/pol protein | 4.0e-71 | 86.34 | Show/hide |
Query: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
MLK IRILLSI TFYDYEIWQMDVKTAFLNGNLE S+YMAQP+GFIK GQEQK+CKLQKSIY LKQASRSWNIKFDT IK+Y FEQNV+EP VYKKVV+S
Subjt: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
Query: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
IVAFLVLY+DDILLIGNDVGYLT+I+KWLA QFQMK LGDAQYVLGIQIVRN KNRTL +S
Subjt: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
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| E2GK51 Gag/pol protein (Fragment) | 6.1e-72 | 83.85 | Show/hide |
Query: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
MLK IRILLSI TFY+YEIWQMDVKTAFLNGNLEESIYM QPEGFI + QEQK+CKLQKSIYGLKQASRSWNI+FDT IKSY FEQNVDEPCVYKK+V+S
Subjt: MLKLIRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDS
Query: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
+VAFL+LY+DDILLIGNDV YLT++KKWL QFQMKDLG+AQY+LGIQIVRN KN+TLA+S
Subjt: IVAFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.9e-23 | 38.1 | Show/hide |
Query: RILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVY---KKVVDSIV
R +LS+ Y+ ++ QMDVKTAFLNG L+E IYM P+G +CKL K+IYGLKQA+R W F+ +K +F + + C+Y K ++ +
Subjt: RILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVY---KKVVDSIV
Query: AFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQI
+++LY+DD+++ D+ + N K++L +F+M DL + ++ +GI+I
Subjt: AFLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-36 | 48.73 | Show/hide |
Query: IRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVY-KKVVDSIVA
IR +LS+ D E+ Q+DVKTAFL+G+LEE IYM QPEGF G++ +CKL KS+YGLKQA R W +KFD+ +KS + + +PCVY K+ ++
Subjt: IRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVY-KKVVDSIVA
Query: FLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
L+LY+DD+L++G D G + +K L+ F MKDLG AQ +LG++IVR +R L +S
Subjt: FLVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVRNHKNRTLAVS
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.5e-14 | 32.81 | Show/hide |
Query: MDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDSIVAFLVLYIDDILLIGNDVGY
MDV TAFLN ++E IY+ QP GF+ + + +L +YGLKQA WN + +K F ++ E +Y + ++ +Y+DD+L+
Subjt: MDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDSIVAFLVLYIDDILLIGNDVGY
Query: LTNIKKWLAMQFQMKDLGDAQYVLGIQI
+K+ L + MKDLG LG+ I
Subjt: LTNIKKWLAMQFQMKDLGDAQYVLGIQI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.1e-23 | 36.73 | Show/hide |
Query: IRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDSIVAF
IRI+L + + I Q+DV AFL G L + +YM+QP GFI K + +CKL+K++YGLKQA R+W ++ + + F +V + ++ + +
Subjt: IRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDSIVAF
Query: LVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVR
+++Y+DDIL+ GND L N L+ +F +KD + Y LGI+ R
Subjt: LVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.6e-23 | 35.37 | Show/hide |
Query: IRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDSIVAF
IRI+L + + I Q+DV AFL G L + +YM+QP GF+ K + +C+L+K+IYGLKQA R+W ++ T + + F ++ + ++ + +
Subjt: IRILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKLQKSIYGLKQASRSWNIKFDTRIKSYDFEQNVDEPCVYKKVVDSIVAF
Query: LVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVR
+++Y+DDIL+ GND L + L+ +F +K+ D Y LGI+ R
Subjt: LVLYIDDILLIGNDVGYLTNIKKWLAMQFQMKDLGDAQYVLGIQIVR
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