; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc08g0224141 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc08g0224141
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr08:13997953..13998861
RNA-Seq ExpressionCmc08g0224141
SyntenyCmc08g0224141
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043587.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.8e-162100Show/hide
Query:  PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSL
        PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSL
Subjt:  PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSL

Query:  QKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITT
        QKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITT
Subjt:  QKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITT

Query:  NNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT
        NNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT
Subjt:  NNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT

KAA0050493.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.4e-15190.88Show/hide
Query:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL
        MKQEI EYVDRCLI QQVKPVRQRPGGFLNPL VPEWKWEHITMDFLFGLPRTSSGHDGIWVIV+RLTK  RFI +K+TSTLDQLARLYVDKIVSQYGV 
Subjt:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL

Query:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC
        VSIVSDR+P  TSKFWPSLQKAMGTGLKFST FH QTDGQSERTIQ+LEDMLRACV+QLKGSWDTHLPLMEFAYNN+YQSSIGMA YEALY RPCRTPVC
Subjt:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC

Query:  WNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE
        WNEV ERKLVGPELVQITTNNIKLIREN R AQDRQKSYADK+RRNLEFQV DQVFLKLSPWRGVIRF RKGKLSPRYI PYQITERVGPAAYRLE
Subjt:  WNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE

KAA0053246.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.4e-15190.88Show/hide
Query:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL
        MKQEI EYVDRCLI QQVKPVRQRPGGFLNPL VPEWKWEHITMDFLFGLPRTSSGHDGIWVIV+RLTK  RFI +K+TSTLDQLARLYVDKIVSQYGV 
Subjt:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL

Query:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC
        VSIVSDR+P  TSKFWPSLQKAMGTGLKFST FH QTDGQSERTIQ+LEDMLRACV+QLKGSWDTHLPLMEFAYNN+YQSSIGMA YEALY RPCRTPVC
Subjt:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC

Query:  WNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE
        WNEV ERKLVGPELVQITTNNIKLIREN R AQDRQKSYADK+RRNLEFQV DQVFLKLSPWRGVIRF RKGKLSPRYI PYQITERVGPAAYRLE
Subjt:  WNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE

TYK05214.1 reverse transcriptase [Cucumis melo var. makuwa]1.4e-15190.88Show/hide
Query:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL
        MKQEI EYVDRCLI QQVKPVRQRPGGFLNPL VPEWKWEHITMDFLFGLPRTSSGHDGIWVIV+RLTK  RFI +K+TSTLDQLARLYVDKIVSQYGV 
Subjt:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL

Query:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC
        VSIVSDR+P  TSKFWPSLQKAMGTGLKFST FH QTDGQSERTIQ+LEDMLRACV+QLKGSWDTHLPLMEFAYNN+YQSSIGMA YEALY RPCRTPVC
Subjt:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC

Query:  WNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE
        WNEV ERKLVGPELVQITTNNIKLIREN R AQDRQKSYADK+RRNLEFQV DQVFLKLSPWRGVIRF RKGKLSPRYI PYQITERVGPAAYRLE
Subjt:  WNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE

TYK29773.1 reverse transcriptase [Cucumis melo var. makuwa]3.8e-162100Show/hide
Query:  PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSL
        PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSL
Subjt:  PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSL

Query:  QKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITT
        QKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITT
Subjt:  QKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITT

Query:  NNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT
        NNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT
Subjt:  NNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT

TrEMBL top hitse value%identityAlignment
A0A5A7TP81 DNA/RNA polymerases superfamily protein1.8e-162100Show/hide
Query:  PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSL
        PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSL
Subjt:  PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSL

Query:  QKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITT
        QKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITT
Subjt:  QKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITT

Query:  NNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT
        NNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT
Subjt:  NNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT

A0A5A7U2V7 Reverse transcriptase6.6e-15290.88Show/hide
Query:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL
        MKQEI EYVDRCLI QQVKPVRQRPGGFLNPL VPEWKWEHITMDFLFGLPRTSSGHDGIWVIV+RLTK  RFI +K+TSTLDQLARLYVDKIVSQYGV 
Subjt:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL

Query:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC
        VSIVSDR+P  TSKFWPSLQKAMGTGLKFST FH QTDGQSERTIQ+LEDMLRACV+QLKGSWDTHLPLMEFAYNN+YQSSIGMA YEALY RPCRTPVC
Subjt:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC

Query:  WNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE
        WNEV ERKLVGPELVQITTNNIKLIREN R AQDRQKSYADK+RRNLEFQV DQVFLKLSPWRGVIRF RKGKLSPRYI PYQITERVGPAAYRLE
Subjt:  WNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE

A0A5D3BHI1 Reverse transcriptase6.6e-15290.88Show/hide
Query:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL
        MKQEI EYVDRCLI QQVKPVRQRPGGFLNPL VPEWKWEHITMDFLFGLPRTSSGHDGIWVIV+RLTK  RFI +K+TSTLDQLARLYVDKIVSQYGV 
Subjt:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL

Query:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC
        VSIVSDR+P  TSKFWPSLQKAMGTGLKFST FH QTDGQSERTIQ+LEDMLRACV+QLKGSWDTHLPLMEFAYNN+YQSSIGMA YEALY RPCRTPVC
Subjt:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC

Query:  WNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE
        WNEV ERKLVGPELVQITTNNIKLIREN R AQDRQKSYADK+RRNLEFQV DQVFLKLSPWRGVIRF RKGKLSPRYI PYQITERVGPAAYRLE
Subjt:  WNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE

A0A5D3BS67 Reverse transcriptase6.6e-15290.88Show/hide
Query:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL
        MKQEI EYVDRCLI QQVKPVRQRPGGFLNPL VPEWKWEHITMDFLFGLPRTSSGHDGIWVIV+RLTK  RFI +K+TSTLDQLARLYVDKIVSQYGV 
Subjt:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL

Query:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC
        VSIVSDR+P  TSKFWPSLQKAMGTGLKFST FH QTDGQSERTIQ+LEDMLRACV+QLKGSWDTHLPLMEFAYNN+YQSSIGMA YEALY RPCRTPVC
Subjt:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC

Query:  WNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE
        WNEV ERKLVGPELVQITTNNIKLIREN R AQDRQKSYADK+RRNLEFQV DQVFLKLSPWRGVIRF RKGKLSPRYI PYQITERVGPAAYRLE
Subjt:  WNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE

A0A5D3E109 Reverse transcriptase1.8e-162100Show/hide
Query:  PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSL
        PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSL
Subjt:  PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSL

Query:  QKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITT
        QKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITT
Subjt:  QKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITT

Query:  NNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT
        NNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT
Subjt:  NNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.8e-3229.53Show/hide
Query:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL
        ++++I EYV  C   Q  K    +P G L P+   E  WE ++MDF+  LP  SSG++ ++V+V+R +KMA  +    + T +Q AR++  ++++ +G  
Subjt:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL

Query:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYS-RPCRTPV
          I++D + + TS+ W          +KFS  +  QTDGQ+ERT Q++E +LR        +W  H+ L++ +YNN+  S+  M  +E ++   P  +P+
Subjt:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYS-RPCRTPV

Query:  CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNL-EFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE
           E+        E  Q T    + ++E+  T   + K Y D + + + EFQ  D V +K +   G +   +  KL+P +  P+ + ++ GP  Y L+
Subjt:  CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNL-EFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE

P0CT35 Transposon Tf2-2 polyprotein3.8e-3229.53Show/hide
Query:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL
        ++++I EYV  C   Q  K    +P G L P+   E  WE ++MDF+  LP  SSG++ ++V+V+R +KMA  +    + T +Q AR++  ++++ +G  
Subjt:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL

Query:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYS-RPCRTPV
          I++D + + TS+ W          +KFS  +  QTDGQ+ERT Q++E +LR        +W  H+ L++ +YNN+  S+  M  +E ++   P  +P+
Subjt:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYS-RPCRTPV

Query:  CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNL-EFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE
           E+        E  Q T    + ++E+  T   + K Y D + + + EFQ  D V +K +   G +   +  KL+P +  P+ + ++ GP  Y L+
Subjt:  CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNL-EFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE

P0CT41 Transposon Tf2-12 polyprotein3.8e-3229.53Show/hide
Query:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL
        ++++I EYV  C   Q  K    +P G L P+   E  WE ++MDF+  LP  SSG++ ++V+V+R +KMA  +    + T +Q AR++  ++++ +G  
Subjt:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL

Query:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYS-RPCRTPV
          I++D + + TS+ W          +KFS  +  QTDGQ+ERT Q++E +LR        +W  H+ L++ +YNN+  S+  M  +E ++   P  +P+
Subjt:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYS-RPCRTPV

Query:  CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNL-EFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE
           E+        E  Q T    + ++E+  T   + K Y D + + + EFQ  D V +K +   G +   +  KL+P +  P+ + ++ GP  Y L+
Subjt:  CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNL-EFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein2.3e-3231.02Show/hide
Query:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL
        ++  I++Y+  C+  Q +K  R R  G L PL + E +W  I+MDF+ GLP TS+  + I V+V+R +K A FI  + T    QL  L    I S +G  
Subjt:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL

Query:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC
         +I SDR+  +T+  +  L K +G     S+  H QTDGQSERTIQ+L  +LRA V     +W  +LP +EF YN++   ++G + +E        TP  
Subjt:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVC

Query:  W--NEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKG---KLSPRYIRPYQITERVGPAAYRL
           +EV  R     EL +         +E    AQ   ++  +++R+ L   + D V +          + +KG   K+   Y+ P+++ +++   AY L
Subjt:  W--NEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKG---KLSPRYIRPYQITERVGPAAYRL

Query:  EFS
        + +
Subjt:  EFS

Q9UR07 Transposon Tf2-11 polyprotein3.8e-3229.53Show/hide
Query:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL
        ++++I EYV  C   Q  K    +P G L P+   E  WE ++MDF+  LP  SSG++ ++V+V+R +KMA  +    + T +Q AR++  ++++ +G  
Subjt:  MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVL

Query:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYS-RPCRTPV
          I++D + + TS+ W          +KFS  +  QTDGQ+ERT Q++E +LR        +W  H+ L++ +YNN+  S+  M  +E ++   P  +P+
Subjt:  VSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYS-RPCRTPV

Query:  CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNL-EFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE
           E+        E  Q T    + ++E+  T   + K Y D + + + EFQ  D V +K +   G +   +  KL+P +  P+ + ++ GP  Y L+
Subjt:  CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNL-EFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAAGAGATAGTTGAATATGTTGATAGATGTTTGATTTATCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTGCTAGTGCCA
GAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCACGTACATCCAGTGGACACGATGGTATATGGGTAATAGTAAACAGACTCACCAAGATG
GCACGATTTATACTGGTTAAAGTGACATCTACGTTAGACCAGCTAGCTAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACTAGTGTCCATAGTTTCA
GATAGGAATCCGATGCTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATTATTTCATCACCAAACAGATGGTCAG
TCTGAGAGGACCATCCAAAGTTTAGAGGACATGTTGAGAGCATGTGTTATTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAAT
AATAGCTATCAGTCTAGTATCGGTATGGCACAATATGAGGCCTTATACAGCAGGCCATGCAGAACTCCTGTGTGCTGGAATGAAGTGTTAGAGCGAAAGCTAGTG
GGTCCTGAGTTGGTTCAGATTACAACAAACAATATTAAGTTAATTAGAGAAAACCCGAGGACAGCCCAAGATCGGCAGAAAAGTTATGCAGATAAGCAACGAAGA
AACTTAGAATTCCAAGTTGAAGATCAAGTTTTCTTGAAGTTATCTCCATGGCGAGGTGTTATTCGTTTCAGAAGAAAAGGTAAGTTAAGTCCTAGATATATTAGG
CCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGACTTGAGTTTTCTTGCACGAATACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAAGAGATAGTTGAATATGTTGATAGATGTTTGATTTATCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTGCTAGTGCCA
GAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCACGTACATCCAGTGGACACGATGGTATATGGGTAATAGTAAACAGACTCACCAAGATG
GCACGATTTATACTGGTTAAAGTGACATCTACGTTAGACCAGCTAGCTAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACTAGTGTCCATAGTTTCA
GATAGGAATCCGATGCTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATTATTTCATCACCAAACAGATGGTCAG
TCTGAGAGGACCATCCAAAGTTTAGAGGACATGTTGAGAGCATGTGTTATTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAAT
AATAGCTATCAGTCTAGTATCGGTATGGCACAATATGAGGCCTTATACAGCAGGCCATGCAGAACTCCTGTGTGCTGGAATGAAGTGTTAGAGCGAAAGCTAGTG
GGTCCTGAGTTGGTTCAGATTACAACAAACAATATTAAGTTAATTAGAGAAAACCCGAGGACAGCCCAAGATCGGCAGAAAAGTTATGCAGATAAGCAACGAAGA
AACTTAGAATTCCAAGTTGAAGATCAAGTTTTCTTGAAGTTATCTCCATGGCGAGGTGTTATTCGTTTCAGAAGAAAAGGTAAGTTAAGTCCTAGATATATTAGG
CCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGACTTGAGTTTTCTTGCACGAATACATGA
Protein sequenceShow/hide protein sequence
MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVS
DRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLV
GPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT